Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq9 311 9e-80
seq6 291 8e-74
seq4576 136 4e-27
seq8 122 9e-23
seq1 118 1e-21
seq1007 116 4e-21
seq11 102 8e-17
seq10 91.5 1e-13
>seq9
Length=34148863
Score = 311 bits (344), Expect = 9e-80
Identities = 583/849 (69%), Gaps = 17/849 (2%)
Strand=Plus/Minus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
|| || || ||||||||| | ||||| || || || | || |||| || || ||||||
Sbjct 33079854 TTCTGGTACTCGCCCACCCTCTTCTCGAAGAAGTTGGCCTTACCCTGCAGCGAGATGAGC 33079795
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723
||| | || ||||||||||| | ||| |||| | | ||| | |||||
Sbjct 33079794 TCCATCCAGTCGAAGGGGTTGGCCGCCCGGTACATCTTGCCGTGGCCCAGCGCCCCGAGC 33079735
Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783
|| | ||||||||||||||||||||| || |||| || || | || | |||
Sbjct 33079734 AGGCGGTCGGCCACGAACTCGATGTACTGGCTCATGAGATCAACGTTCATCCCGACGAGA 33079675
Query 132784 CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATT 132843
|| || || || ||| || || |||||||| | || ||||| | ||||||
Sbjct 33079674 GCGACAGGGAGTGCGTCGCAGACGAACTCCCGCTCGATGTCAACAGCGTCCGCAACGATT 33079615
Query 132844 TCCCTAACGCGCG-CCGCGCTCGGCC-GTTGCACCAAATGCTTGAACATCAAGCAAGCAA 132901
||| || ||| || || | || ||||| | ||| | | | | ||| || |
Sbjct 33079614 GCCCGGAC-CGCTTCCTCGGACAGCTTGTTGCGGAGGAGGCT-GTAGAGGAGGCAGGCGA 33079557
Query 132902 AGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCA 132961
||||||| || | ||||||||| | ||| |||||||||||| ||| || | ||||||||
Sbjct 33079556 AGTCGCAGTGGAGGCCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTGAGGCCGGGCA 33079497
Query 132962 TGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCT 133021
||||||||||||| |||||||| || || ||| ||| || || ||||||| |||||
Sbjct 33079496 TGAGGCCGCGTTTCTTGAGCCAGAAGATAGCGCAGAAGGAACCGGAGAAGAAGATGCCCT 33079437
Query 133022 CGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGG---CGATCC 133078
||||| ||||| || || ||||||||| |||| | | | | || ||||||
Sbjct 33079436 CGACGCAGGCGAAGGCAACGAGGCGCTCGGCGAAGGAGCC------GGAGGAATCGATCC 33079383
Query 133079 AGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA 133138
|||| || ||||| ||||||||| |||| || | || |||||||||| || |
Sbjct 33079382 AGCGAAGGGCCCAGTCGGCCTTTCGGGCGACGGCGGGGACGGTATCGATGGCGTGGAAGA 33079323
Query 133139 AACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCG 133198
|| || || || | | ||||||||||||| |||| || ||||| || |
Sbjct 33079322 GGCGATACTTGTCGTCGGGGTCCTTGACGTAGGTGTCGAGGAGGAGGGAGTACATCTCGG 33079263
Query 133199 AGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCA 133258
|||| | |||||| |||||||| || |||||||| ||| || |||||| | ||| |
Sbjct 33079262 AGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGGGCCTCGGGGAGCTGGA 33079203
Query 133259 CTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAA 133318
| || | ||| ||| || | || || ||| |||||||||| ||| ||||||||| |
Sbjct 33079202 CGTCGCGCATGAAGCGCGCGGCGAGGTTCTCGATGACGATGCCATCGGAGGCGGCGAAGA 33079143
Query 133319 AGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGC 133375
|||| || ||||| || || ||||||||| | | | | | | | ||||| |
Sbjct 33079142 AGGCGAGGACGTGGGAGACAAAGCGGCGCTCGTCGGGGGTGAGACGGTGTTGCCAGTGGG 33079083
Query 133376 GCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435
|||| ||||||||||||||||| | ||||| ||||| ||| | || || ||||
Sbjct 33079082 AGAGGTCCGGCGACAGGTCCACCTCCTCCGCCGTCCAGAACGAGGCCACCGCCTTCTTGT 33079023
Query 133436 ACATACTCC 133444
| | |||||
Sbjct 33079022 AGA-ACTCC 33079015
Score = 246 bits (272), Expect = 3e-60
Identities = 439/634 (69%), Gaps = 9/634 (1%)
Strand=Plus/Minus
Query 132815 GCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCC-GTTGC 132873
|||||||| |||| ||||||| ||||| ||| || || || | | || |||||
Sbjct 1097072 GCTCGATGTCGACAGCGTCGGCAACGATGGCCCGGACACGGTCCTCCGACAGCTTGTTGC 1097013
Query 132874 ACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATG 132933
| ||| | | | | ||| || ||||||||||| | ||||||||| | ||| ||
Sbjct 1097012 GGAGGAGGCT-GTAGAGGAGGCAGGCGAAGTCGCAATGAAGGCCCTCGTCACGGGAGATA 1096954
Query 132934 AGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCG 132993
|| ||||| ||| || | || |||||||||||||| || ||||||||||| || |||
Sbjct 1096953 AGCTCGTTCGAGAAGGTGAGCCCCGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATAGCG 1096894
Query 132994 GCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCG 133053
||| ||| || ||||||| |||||||| ||||| || || | |||||| |
Sbjct 1096893 CAGAAGGAGCCAGAGAAGAAGATTCCCTCGACACAGGCGAAGGCGACAATTCGCTCGGCA 1096834
Query 133054 AACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCAC 133113
|||| | | | | | ||||||||||| ||||| ||||||||| ||| |
Sbjct 1096833 AACGAGCCGGAA--GATT-CAATCCAGCGCAGGGCCCAGTCGGCCTTTCGGGCGACAGAG 1096777
Query 133114 GGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTG 133173
|| | ||| |||||||| || | |||| ||||| || | | | |||||||
Sbjct 1096776 GGGACCGTCTCGATGGCTCGGAAGAGACGGGTCTTCTCGTCAGGGTCCTTGATGTAGGTG 1096717
Query 133174 TCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAA 133233
|||| |||| || ||||| || ||||| | |||||| |||||||| || ||||||||
Sbjct 1096716 TCGAGGAGGAGGGAGTACATCTCAGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAG 1096657
Query 133234 AAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTG 133293
||| || |||||| | ||| || || | ||| || || | || || || |
Sbjct 1096656 AAGGCGCGAGCCTCGGGGAGCTGGACGTCGCGCATGAACCGGGCGGCGAGGTTCTCAAGG 1096597
Query 133294 ACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTG 133353
||||||||||| ||||||||| ||||| || ||||| |||||| |||||||||| |
Sbjct 1096596 ACGATGCCGTCTGAGGCGGCGAAGAAGGCAAGAACGTGGGAGATGAAGTGGCGCTCGTCG 1096537
Query 133354 TCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTC 133410
| | | || ||| ||| | | | |||| ||||| ||||||||||| | |||
Sbjct 1096536 TGGGAGAGGCGATGCTGCCAATGGGGTACGTCCGGAGACAGATCCACCTCCTCCGCCGTC 1096477
Query 133411 CAAAACGACGCCTCGGCTTTTTTGTACATACTCC 133444
|| || || ||| | || || ||||| | |||||
Sbjct 1096476 CAGAAGGAGGCCACCGCCTTCTTGTAGA-ACTCC 1096444
Score = 82.4 bits (90), Expect = 8e-11
Identities = 139/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| |||||||| || || || || ||||||||||| || |||||| |||| || ||| |
Sbjct 11332190 AAGATGCAAATCTTTGTGAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCG 11332131
Query 38301 ACCGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-G 38358
| |||| | | |||| | || | || |||| || | || ||| ||| ||| |
Sbjct 11332130 TCGGACACGATCGACAACG-TGAAGGCTAAGATCCAGGAGGAGGA-GGACATCCAGCCGG 11332073
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| | ||| |||| | |||||| || | || |||| ||||| ||| |||||
Sbjct 11332072 ACCAGCCGCGTATCATCTTCGCGGG----GAGATCGAGGACGGCCGCACGCTCGCCGACT 11332017
Query 38419 ACAACATCCAAAAGGA 38434
|||||||||| |||||
Sbjct 11332016 ACAACATCCAGAAGGA 11332001
>seq6
Length=34899179
Score = 291 bits (322), Expect = 8e-74
Identities = 625/916 (68%), Gaps = 20/916 (2%)
Strand=Plus/Minus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
|| || || ||||| ||| | ||||| || || || || || |||| || || ||||||
Sbjct 15337311 TTCTGGTAGTCGCCGACCCTCTTCTCGAAGAAGTTTGTCTTCCCCTGCAGCGAGATGAGC 15337252
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATC--AGGTCGACGA 132721
||| | || ||||||||||| | ||| ||| | | | | || | | |
Sbjct 15337251 TCCATCCAGTCGAAGGGGTTGGCCGCCCCGTACAACTT--TTCGTAACCTAGCGCTCCAA 15337194
Query 132722 GCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCA 132781
|||| | |||||||||||||||||| || || |||| |||| ||| | |||| ||
Sbjct 15337193 GCAGGCGGTCGGCCACGAACTCGATATACTGACTCATGAGGTCGCCATTCA-TCCCGACA 15337135
Query 132782 GACGC-ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACG 132840
|| |||||||| || | | || || |||||||| | || || |||| |||
Sbjct 15337134 AGGGCGACCGGCAGGGCATTGCAGACGAATTCCCGCTCGATGTCAACGGCATCGGCAACG 15337075
Query 132841 ATTTCCCTAACGCGCGCCGCGCTCGGCC-GTTGCACCAAATGCTTGAACATCAAGCAAGC 132899
||||| | || || | || || ||||| || || | | | | ||| ||
Sbjct 15337074 ATTTCACGGACACGGTACTCGGAGAGCTTGTTGCGAAGAAGACT-GTAGAGGAGGCAGGC 15337016
Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959
|||||||| || | ||||||||| | ||| ||||| ||||| ||| || | || ||
Sbjct 15337015 GAAGTCGCAGTGGAGGCCCTCGTCACGGGAGATGAGCTCGTTTGAGAAGGTGAGACCCGG 15336956
Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019
||||||||| || || |||||||| || |||||| ||| ||| || |||||||| ||
Sbjct 15336955 CATGAGGCCTCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGACTCC 15336896
Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCA 133079
||||||| ||||| || || ||||||||| |||| | | | | | |||||||
Sbjct 15336895 CTCGACGCAGGCGAAGGCAACGAGGCGCTCGGCGAATGAGACAGAG--GATT-CGATCCA 15336839
Query 133080 GCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAA 133139
||| |||||||| |||||||| ||| || | || || ||||| | || |
Sbjct 15336838 GCGTAGCGCCCACTCGGCCTTGCGGGCGACAGGAGGGACGGTGTCAATGGCATGGAAGAG 15336779
Query 133140 ACGGAGTTTCTCTTCCGAGGAACGC-ACGTAGGTGTCGATGAGGGTCGAATACATTTCCG 133198
|| ||||| ||| || | | ||||||||||| |||| |||||||| || |
Sbjct 15336778 GCGAGACTTCTCG-CCGGGGTCCTTGATGTAGGTGTCGAGGAGGAGAGAATACATCTCAG 15336720
Query 133199 AGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCA 133258
|||| | |||||| || ||||| || |||||||| ||| || ||||| | ||| |
Sbjct 15336719 AGTGGATGTTCTCGATAGCGATCTGGAAGCCGTAGAAGGCGCGGGCCTCAGGAAGCTGGA 15336660
Query 133259 CTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAA 133318
| || | ||| || | |||| || ||| ||||||||||||| |||||| ||||
Sbjct 15336659 CGTCGCGCATGAACCGGGCCGCCAGGTTCTCGAGGACGATGCCGTCGGAGGCGGCAAAAA 15336600
Query 133319 AGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGC 133375
|||| || || || |||||| ||| |||||| | || || || || ||||| |
Sbjct 15336599 AGGCGAGGACATGGGAGATGAAGTGGTGCTCGTCGGCGGACAGACGATCCTGCCAGT-GG 15336541
Query 133376 GCGTG-TCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTG 133434
| | | |||| ||||| |||||||||||| | ||||| || || ||| |||| ||||||
Sbjct 15336540 GAGAGATCCTGGGACAAGTCCACCTCCTCCGCCGTCCAGAAGGAGGCCACGGCCTTTTTG 15336481
Query 133435 TACATACT-CCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTC 133493
|| | ||| ||| || || || |||||||| || |||||| || || ||
Sbjct 15336480 TAGA-ACTCCCAGATTGACGGGTAGGTGATGGGAAACATGCAGAACCGGTCCGGATTCTC 15336422
Query 133494 GCGCAACAGCGGCTCC 133509
|||||||||||||
Sbjct 15336421 CGCCAACAGCGGCTCC 15336406
Score = 237 bits (262), Expect = 2e-57
Identities = 609/914 (67%), Gaps = 14/914 (2%)
Strand=Plus/Minus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
|| || || || || ||| ||||||| || || || || || |||| || || |||||
Sbjct 4329029 TTCTGGTACTCACCGACCCTTTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGAGATGAGT 4328970
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723
||| | || || ||||||| ||| ||| | | ||| | |||||
Sbjct 4328969 TCCATCCAGTCGAAAGGGTTGGAGACCCCGTACATTTTGCCGTAGCCCAGCGCCCCGAGC 4328910
Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783
|| | |||||| || ||||||||||| || |||| | | ||| | || | ||
Sbjct 4328909 AGGCGGTCGGCGACAAACTCGATGTACTGGCTCATGAGGACACCATTCATCCCGACGAG- 4328851
Query 132784 CGC-ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT 132842
||| || ||||| || ||| || || |||||||| | || ||||||| |||||
Sbjct 4328850 CGCGACGGGCAGGGCGTCGCAGACGAACTCCCGCTCGATGTCAACGGCGTCGGCAACGAT 4328791
Query 132843 TTCCCTAACGCGCGCCGCGCTCGGCC-GTTGCACCAAATGCTTGAACATCAAGCAAGCAA 132901
||| || || || || ||||| | || || | | ||||||||
Sbjct 4328790 AGCCCGGACCTTGTCCTCGGAGAGCTTGTTGCGGAGGAGGCCGTAA-AGGAGGCAAGCAA 4328732
Query 132902 AGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCA 132961
||||||| || | ||||||||| | ||| ||||| |||||| ||| || | |||||||
Sbjct 4328731 AGTCGCAGTGAAGGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCA 4328672
Query 132962 TGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCT 133021
|||||||||| || |||||||| || |||||| ||| ||| || || |||| |||||
Sbjct 4328671 TGAGGCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAAAAGATGCCCT 4328612
Query 133022 CGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGC 133081
||||| ||||| || || || |||||| |||| | || || | |||||
Sbjct 4328611 CGACGCAGGCGAAGGCGACGAGTCGCTCGGCGAA-GGAGCCGGAAGACT--CAATCCATT 4328555
Query 133082 GCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAAC 133141
| || |||||||||||||| |||| || | || ||||| |||| || | |
Sbjct 4328554 GGAGAGCCCATTCGGCCTTCCGGGCGACGGCAGGGACGGTGTCGATCGCGTGGAAGAGGC 4328495
Query 133142 GGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGT 133201
| | ||| | || | | | ||| || |||| || || ||||| || ||||
Sbjct 4328494 GAAACTTCACGTCGGGGTCCTTGATGTACGTATCGAGTAGAAGGGAGTACATCTCGGAGT 4328435
Query 133202 GTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTT 133261
| | |||||| || || || || || ||||| ||| || |||||| | || || |
Sbjct 4328434 GGATGTTCTCGATTGCAATCTGGAAACCGTAGAAGGCGCGGGCCTCGGGGAGTTGGACGT 4328375
Query 133262 CTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGG 133321
| | ||| || || |||| || ||| ||||||||||||| |||||| |||||||
Sbjct 4328374 CGCGCATGAAGCGGGCGGCCAGGTTCTCGAGGACGATGCCGTCGGAGGCGGCAAAAAAGG 4328315
Query 133322 CCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCG 133378
| || ||||| || ||| |||||||||| |||| | || ||| ||| | |
Sbjct 4328314 CGAGGACGTGGGAGACGAAGTGGCGCTCGTCGTCGGAGAGGCGGTGCTGCCACTGGGAGA 4328255
Query 133379 TGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACA 133438
|||| ||||||||||||||||| ||||||| || || ||| | || || ||||| |
Sbjct 4328254 GGTCCGGCGACAGGTCCACCTCCTCTGCGGTCCAGAAGGAGGCCACCGCCTTCTTGTAGA 4328195
Query 133439 TACT-CCACATGTCCGAATATTGTATGGGAAAAAT-CACAAACCGGCGGGGGTTTTCGCG 133496
||| ||| ||| | || || ||||| || || || | | | ||| | | |||
Sbjct 4328194 -ACTCCCAGATGGAGGGGTAGGTGATAGGAAACATGCAGAAGCGGTCAGGGTTCTCCGC- 4328137
Query 133497 CAACAGCGGCTCCG 133510
|| |||||||||||
Sbjct 4328136 CAGCAGCGGCTCCG 4328123
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| ||||| || || || |||||| | || || || || |
Sbjct 13144163 ATGCAAATCTTTGTCAAAACTCTCACTGGAAAGACGATCACCCTTGAGGTTGAATCCTCT 13144222
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | |||| || |||| || || |||||||| ||| | |||||
Sbjct 13144223 GACACCATTGACAATGTCAAAGCCAAGATCCAGGATAAGGAGGGAATACCCCCGGACCAG 13144282
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | || | || ||||| || || || || | |||||||| |||||||||
Sbjct 13144283 CAAAGGTTGATATTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTGCTGACTACAAC 13144342
Query 38424 ATCCAAAAGGA 38434
|||||||||||
Sbjct 13144343 ATCCAAAAGGA 13144353
>seq4576
Length=2771
Score = 136 bits (150), Expect = 4e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || |||||||| || |||||||||||| |||| ||||| | ||
Sbjct 2491 ATGCAGATCTTTGTTAAGACGCTCACTGGAAAAACCATCACCCTCGAGGTCGAAAGCTCC 2550
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| || |||| ||||||||||| || || |||||||
Sbjct 2551 GACACCATCGACAACG-TCAAAGCTAAGATCCAGGACAAAGAGGGCATCCCTCCCGACCA 2609
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| ||||||||| ||||||||| ||||| || || | || || || ||||||||
Sbjct 2610 GCAAAGGCTCATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTTGCGGACTACAA 2669
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| || || ||||||| || | || || |||
Sbjct 2670 CATCCAGAAAGAGTCGACGCTCCACCTCGTCCTCCGT 2706
>seq8
Length=35439739
Score = 122 bits (134), Expect = 9e-23
Identities = 159/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || ||||| ||| | || |||||| | |
Sbjct 4857997 ATGCAGATCTTCGTGAAGACTCTCACTGGGAAGACCATTACCTTGGAGGTCGAGAGCTCG 4858056
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361
|||| | | |||| | || | || |||| ||||| ||||| || ||||||| |||
Sbjct 4858057 GACACAATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 4858114
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || ||||||| | || ||||||||||| || |||| ||||| || ||| ||||
Sbjct 4858115 AGCAAAGGCTCATCTTTGCAGGCAAACAGCTCGAAGACGGCCGCACTCTTGCCGATTACA 4858174
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
||||||| ||||| | ||||| ||| ||||||||
Sbjct 4858175 ACATCCAGAAGGAGTCCACGCTCCATCTGGTGCTG 4858209
Score = 120 bits (132), Expect = 3e-22
Identities = 148/197 (75%), Gaps = 4/197 (2%)
Strand=Plus/Plus
Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || ||||| || || || ||||| || || |||||| |||| || ||| |
Sbjct 32122228 AAAGATGCAGATCTTCGTGAAGACCCTTACGGGGAAGACAATCACCCTCGAGGTGGAGTC 32122287
Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
| | |||| | | |||| | || | || |||| ||||| || || || |||||||
Sbjct 32122288 CTCGGACACGATCGATAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGGAT-CCCGCCG 32122345
Query 38359 -ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417
|||| ||| ||||||| | ||| || || ||||| || |||| ||||||||| ||||
Sbjct 32122346 GACCAGCAGAGGCTCATCTTCGCCGGGAAGCAGCTCGAGGACGGCCGCACCCTCGCCGAC 32122405
Query 38418 TACAACATCCAAAAGGA 38434
||||||||||| |||||
Sbjct 32122406 TACAACATCCAGAAGGA 32122422
Score = 109 bits (120), Expect = 5e-19
Identities = 152/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || ||||| ||||| || || |||||| |||| || || |
Sbjct 26901038 AAGATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACCCTCGAGGTGGAATCG 26900979
Query 38301 ACCGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG- 38358
| |||| | || |||| | || | || || | ||||| ||||| || |||||||
Sbjct 26900978 TCGGACACGATTGACAACG-TGAAGGCCAAGATTCAGGACAAGGAGGGCAT-CCCGCCGG 26900921
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
| || ||||| ||||| | ||| || || |||||||| || | || |||||| |||||
Sbjct 26900920 ATCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGAACCCTCGCCGACT 26900861
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCA 38446
||||||| || ||||| | ||||| ||
Sbjct 26900860 ACAACATTCAGAAGGAGTCCACGCTCCA 26900833
Score = 102 bits (112), Expect = 8e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || ||||| || || ||||| ||| | || ||||| | |
Sbjct 4857769 ATGCAGATCTTTGTGAAGACCCTCACCGGGAAGACCATAACCTTGGAGGTCGAAAGCTCT 4857828
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | |||| | || |||| ||||| ||||| || ||| | |||||
Sbjct 4857829 GACACCATCGACAATGTTAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 4857888
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| ||||||| | || ||||| ||||| || |||| ||||| ||| ||||||||||
Sbjct 4857889 CAAAGGCTCATCTTTGCAGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 4857948
Query 38424 ATCCAAAAGGA 38434
|| || |||||
Sbjct 4857949 ATTCAGAAGGA 4857959
>seq1
Length=27573629
Score = 118 bits (130), Expect = 1e-21
Identities = 147/196 (75%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || ||||| || || || |||||| |||| || ||| |
Sbjct 19376325 AAGATGCAGATCTTCGTGAAGACCCTCACCGGGAAGACGATCACCCTCGAGGTGGAGTCT 19376266
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG- 38358
| |||| | | | |||| | || | || |||| ||||| ||||| || |||||||
Sbjct 19376265 TCGGACACCATCGACAACG-TCAAGGCGAAGATCCAGGACAAGGAGGGGAT-CCCGCCGG 19376208
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||||| ||||| | || || || ||||| || |||| |||||||||| ||||
Sbjct 19376207 ACCAGCAGCGCCTCATATTTGCCGGGAAGCAGCTCGAGGACGGGCGCACCCTCGCAGACT 19376148
Query 38419 ACAACATCCAAAAGGA 38434
|||||||||| |||||
Sbjct 19376147 ACAACATCCAGAAGGA 19376132
>seq1007
Length=1704909
Score = 116 bits (128), Expect = 4e-21
Identities = 167/233 (72%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || ||||| || || ||||| || || || || ||| |||| || ||| |
Sbjct 32531 AAAGATGCAGATCTTCGTGAAGACCCTCACCGGGAAGACGATTACCCTCGAGGTGGAGTC 32472
Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
| ||| | | | |||| | || | || |||| ||||| || || ||||| |
Sbjct 32471 ATCGGACGCCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCTCAGG 32413
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||||||||||| | ||| || || ||||| || |||| ||||||||| |||||
Sbjct 32412 ACCAGCAGCGGCTCATCTTCGCCGGGAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACT 32353
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||||||| ||||| | || || || | || || || || | ||||||
Sbjct 32352 ACAACATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGCCTGCGCGGCGGC 32300
>seq11
Length=25514024
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297
||| | ||||| || || || || |||||||| || || || |||||| |||| ||||||
Sbjct 16241647 AAACAGATGCAGATCTTTGTGAAGACGCTCACCGGGAAGACGATCACCCTCGAAGTCGAG 16241588
Query 38298 GCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGC 38356
| | |||| | | | |||| | || | || || | ||||| || || ||||| |
Sbjct 16241587 AGCTCGGACACCATCGACAACG-TGAAGGCCAAGATTCAGGACAAGGAAGGCATTCCACC 16241529
Query 38357 CGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 38416
||||| || ||||||| | |||||||| ||||| || |||| || || || ||
Sbjct 16241528 GGACCAGCAAAGGCTCATCTTTGCGGGCAAGCAGCTCGAGGACGGCCGTACTCTTGCAGA 16241469
Query 38417 CTACAACATCCAAAAGGA 38434
|||||||||||| |||||
Sbjct 16241468 CTACAACATCCAGAAGGA 16241451
>seq10
Length=33665772
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||||||| | || || ||||| ||||| ||||||||| | || || || | ||
Sbjct 14516247 ATGCAAATATTCATTAAGACTCTCACCGGCAAGACCATCACCCTTGAAGTTGAATCTTCC 14516188
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | |||| ||||| | || |||||||| ||||| | |||||
Sbjct 14516187 GATACTATTGATAATGTGAAAGCTAAAATTCAAGATAAAGAGGGTATTCCACCGGACCAG 14516128
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | || | || || ||||| | || || | |||||||| ||||||||
Sbjct 14516127 CAAAGGTTAATCTTTGCTGGGAAACAATTAGAGGATGGTCGCACCCTTGCGGACTACAAT 14516068
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| | || || || ||||||| ||
Sbjct 14516067 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCG 14516033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500127415570560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |