Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq9 178 1e-38
seq10 163 2e-34
seq7 154 1e-31
seq8 147 2e-29
seq3 122 7e-22
seq6 116 3e-20
seq4 114 1e-19
seq1335 107 2e-17
seq2 91.5 1e-12
seq5 87.8 1e-11
>seq9
Length=34148863
Score = 178 bits (196), Expect = 1e-38
Identities = 563/864 (65%), Gaps = 13/864 (2%)
Strand=Plus/Minus
Query 551735 TGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGA 551794
||| || ||||||| | | ||||| ||| ||||| || ||||| ||| ||
Sbjct 2682379 TGATGTCTCTCTTCTGACCATTGAAGAGGGTATCTTTGAGGTGAAGGCTACAGCTGGTGA 2682320
Query 551795 TTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGAT 551852
| | |||||||| || || |||||||| ||| | |||| | ||| | ||| | ||
Sbjct 2682319 TACCCATCTTGGCGGAGAGGATTTTGACAATCGCATGGTCAACCAT--TTTGTCCAGGAA 2682262
Query 551853 TTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGA 551912
|| || |||| |||| || || | | | | ||||| | | | ||
Sbjct 2682261 TTCAAGAGAAAGCACAAGAAAGACATAAGTGGAAACCCTAGGGCTCTCAGGAGATTGAGG 2682202
Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972
|| || |||||||| || || || | || ||||| | |||||||||| ||||| |
Sbjct 2682201 ACAGCATGCGAAAGGGCAAAGAGAACCCTATCATCAACTGCTCAAACCACAATTGAGATT 2682142
Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032
||||| || | |||||| | |||| | || | ||| | || || | ||||||||
Sbjct 2682141 GATTCCTTGTACGAGGGAGTCGATTTCTACACCACCATTACCAGAGCTAGGTTTGAAGAA 2682082
Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT--TTTAAGAGATT 552090
|| | || || || || || || || || || || |||| || ||| ||
Sbjct 2682081 CTTAATATGGACCTGTTCAGGAAGTGCATGGAGCCTGTTGAG-AAGTGCTTGAAG-GACG 2682024
Query 552091 CAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTC 552150
||||||| || || || || ||||| ||||||||||||||||||| || |||||||
Sbjct 2682023 CAAAGATGGACAAGAGCAGCGTGCATGATGTTGTGCTTGTTGGTGGATCCACTAGAATTC 2681964
Query 552151 CTAAAATTCGCGAAATGTT-AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTT 552209
|||| ||| | | || || ||| ||| ||||| || | || ||||| ||
Sbjct 2681963 CTAAGGTTCAGCAGCTCTTGCAGGACTTCTTT-AATGGGAAGGAGTTGTGCAAAAGTATT 2681905
Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269
|| || || |||||||||||||||||||| || |||| ||||| || || ||| |
Sbjct 2681904 AACCCCGACGAGGCTGTTGCCTATGGTGCGGCTGTTCAGGCAGCCATACTGAGTGGGGAG 2681845
Query 552270 ACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTA 552329
|||| || | || | | | || | ||||| || || || ||||||||| |
Sbjct 2681844 GGCAATGAGAAGGTGCAGGACCTGCTTCTGTTGGATGTCACACCGCTCTCTCTTGGTCTG 2681785
Query 552330 GAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAA 552389
|| |||| ||||| | ||||| | ||| || || || ||||| || ||
Sbjct 2681784 GAGACAGCCGGAGGAGTAATGACCGTGTTGATCCCAAGGAACACCACTATCCCCACGAAG 2681725
Query 552390 AAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTT 552449
||| | || || || || ||||| || || ||| ||| ||| |||||| ||| |
Sbjct 2681724 AAAGAGCAGGTTTTCTCGACCTATTCTGACAACCAACCTGGTGTCTTGATTCAAGTTTAT 2681665
Query 552450 GAAGGAGAAAGAAAATTCACTAAAGATAATAAT---CAACTTGGTACTTTTAATTTAGAA 552506
|| || || || | |||| |||||||||| | ||||||| || | |
Sbjct 2681664 GAGGGCGAGAGGACTAGGACTAGAGATAATAATAACCTTCTTGGTAAATTCGAGCTCTCT 2681605
Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566
|| ||||| || || ||| | || || || || || ||| | || || || || |||
Sbjct 2681604 GGCATTCCACCGGCACCTAGGGGTGTTCCACAGATCACTGTTTCCTTTGACATAGACGCC 2681545
Query 552567 AATGGAATTTTGAATGTGACTGCT 552590
||||| || |||||||| |||||
Sbjct 2681544 AATGGTATCTTGAATGTCTCTGCT 2681521
Score = 104 bits (114), Expect = 2e-16
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050
|| ||| || |||||| | || ||||| || |||||||||||||| |||||||| |
Sbjct 28557845 AGTTATTGGGATAGATCTTGGCACCACCTACTCTTGTGTTGGTGTTTACAAAAATGGTCA 28557786
Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110
|| || || || |||||||| ||||| ||| | | || || |||| || |||||||
Sbjct 28557785 TGTGGAGATCATAGCCAATGACCAAGGAAACCGTATCACCCCTTCTTGGGTGGCTTTCAC 28557726
Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170
|| |||| ||| ||||||| || ||||| |||| || ||| || | |
Sbjct 28557725 TGACTCTGAGAGATTAATTGGTGAAGCTGCAAAGAATCAGGCAGCTGTGAACGCCGAAAG 28557666
Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAA 550205
|| |||||||||| |||| | | || |||||||
Sbjct 28557665 GACCATTTTTGATGTTAAAAGACTTATCGGAAGAA 28557631
Score = 98.7 bits (108), Expect = 8e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369
|| || ||| | ||||| | ||||| |||||||| || || || |||||| ||| ||
Sbjct 2682666 AAGCAGTTTGCTGCAGAAGAGATTTCTTCTATGGTCTTGATAAAGATGAAAGAAATTGCT 2682607
Query 550370 AGTGCTTTTGTTGG-TCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAA 550428
|| | | || || | || | |||| || | ||||| || || || || ||
Sbjct 2682606 GAAGCCTACCTGGGCTCTACT-GTAAAAAATGCTGTTGTTACTGTTCCTGCTTACTTCAA 2682548
Query 550429 TGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCG 550488
|||||| || ||||| || || |||||||| || |||||||| || ||||| | |
Sbjct 2682547 TGACTCTCAGCGTCAGGCAACAAAAGATGCAGGTGTCATTGCTGGTCTCAATGTAATGAG 2682488
Query 550489 TATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536
||||||||||| || || |||||||| |||| ||||| || || ||
Sbjct 2682487 GATTATCAATGAGCCGACAGCTGCTGCTATTGCTTATGGTCTCGACAA 2682440
Score = 96.9 bits (106), Expect = 3e-14
Identities = 111/147 (76%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| | ||||| | || || || ||||| || ||||| || ||| | ||||||
Sbjct 4968334 GTTACAAAAGCAGTGGTTACAGTTCCTGCATACTTCAATGATTCCCAAAGGACAGCTACA 4968275
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTA-ATGTTCTTCGTATTATCAATGAACCTACTGC 550509
|| ||||| || ||||| ||||| |||| | ||||||||||| |||||||| || || ||
Sbjct 4968274 AAGGATGCCGGTCGTATCGCTGG-CTTAGAAGTTCTTCGTATCATCAATGAGCCGACAGC 4968216
Query 550510 TGCTGCACTTGCATATGGACTTGATAA 550536
||| || | |||||||| |||| ||
Sbjct 4968215 TGCATCATTGGCATATGGTTTTGAAAA 4968189
>seq10
Length=33665772
Score = 163 bits (180), Expect = 2e-34
Identities = 453/684 (66%), Gaps = 8/684 (1%)
Strand=Plus/Minus
Query 551910 AGAACTGCTTGCGAAAGAGCCAA-ACGAGCTCTTTCATCTGGTACTCAAACCACTATTGA 551968
|| || || ||||||||||| || | || || | || || | ||||||| || || ||
Sbjct 1504491 AGGACAGCATGCGAAAGAGCTAAGAGGACCT-TGTCTTCCACTGCTCAAACTACAATCGA 1504433
Query 551969 AGTAGATTCATTATTTGAGGGAATTGATTA-TAATACGCCTATTTCGAGGGCCAAATTTG 552027
| ||||| || | ||||| ||||||| || | | || ||| | || || | ||||
Sbjct 1504432 GATTGATTCCTTGTACGAGGGCATTGATTTCTACTCCACC-ATTACTAGAGCGAGGTTTG 1504374
Query 552028 AAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT-TAAGA 552086
|||| || || || || || || || ||||| || || |||| | ||
Sbjct 1504373 AAGAGCTTAACATGGACCTGTTCAGGAAGTGCATGGAACCTGTCGAG-AAGTGCCTGAGG 1504315
Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146
||| ||||||| || || || || || || |||| ||||||||||| || || |||
Sbjct 1504314 GATGCAAAGATGGACAAGAGCAGTGTCCACGATGTTGTCCTTGTTGGTGGGTCCACGAGA 1504255
Query 552147 ATTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAG 552205
||||| || ||| || | || || ||| || |||||| || | || ||||
Sbjct 1504254 ATTCCAAAGGTTCAGCAACTCTTGCAGGACTTCTT-CAATGGGAAGGAGTTGTGCAAAAG 1504196
Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265
| ||||||| |||||||| ||||| |||||||| || |||| || || || || |||
Sbjct 1504195 TATTAATCCGGATGAGGCCGTTGCTTATGGTGCTGCTGTTCAGGCTGCCATACTCAGTGG 1504136
Query 552266 ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325
| |||| || | || | | | ||| | ||||| || || || ||||||||
Sbjct 1504135 GGAGGGCAATGAGAAGGTGCAGGACCTGCTTCTTTTGGATGTCACACCGCTCTCTCTTGG 1504076
Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385
| | || |||| |||||| | |||||| | | ||| || || || ||||| |||
Sbjct 1504075 TCTGGAGACAGCTGGAGGAGTAATGACTGTTTTAATCCCGAGGAACACCACTATCCCTAC 1504016
Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445
|| || | || || || |||||||| ||||| || ||| ||| || || |
Sbjct 1504015 AAAGAAGGAGCAGGTCTTCTCGACGTATTCTGATAACCAGCCTGGTGTCTTGATCCAGGT 1503956
Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505
|| || || || || | || | |||||| |||| || || | ||| | |
Sbjct 1503955 TTACGAGGGTGAGAGGACTAGGACGAGAGATAACAATCTCCTAGGCAAATTTGAGCTCTC 1503896
Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565
|||||||| |||||||| | || || || || || |||| || || || |||||
Sbjct 1503895 TGGTATTCCACCTGCTCCAAGGGGTGTTCCTCAGATCACAGTTTGCTTTGACATTGATGC 1503836
Query 552566 CAATGGAATTTTGAATGTGACTGC 552589
|||||| || ||||| ||| ||||
Sbjct 1503835 CAATGGTATCTTGAACGTGTCTGC 1503812
Score = 116 bits (128), Expect = 3e-20
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369
||||| ||||| | ||| | ||||| |||||||| || || ||||||||| ||| |||
Sbjct 1504953 AAACAGTTTTCTGCGGAAGAGATTTCTTCTATGGTCTTGATAAAAATGAAAGAAATCGCC 1504894
Query 550370 AGTGCTTTTGTTGGT-CAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAA 550428
|| | | ||| | | | | | | |||| || | ||||| || || || |||||
Sbjct 1504893 GAAGCCTACCTGGGTTCCACCA-TAAAGAATGCCGTTGTTACTGTTCCTGCTTACTTTAA 1504835
Query 550429 TGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCG 550488
|||||| || || || || || ||||| ||||| |||||||| |||||||| | |
Sbjct 1504834 TGACTCCCAGCGCCAGGCAACCAAAGACGCTGGTGTCATTGCTGGTCTTAATGTAATGAG 1504775
Query 550489 TATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536
|||||||| || || || |||||||| |||| ||||| || || ||
Sbjct 1504774 GATTATCAACGAGCCAACAGCTGCTGCTATTGCCTATGGTCTCGACAA 1504727
Score = 95.1 bits (104), Expect = 1e-13
Identities = 157/222 (71%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313
||| ||||| || || || ||||| ||| | ||| |||||||| || || || ||
Sbjct 14516029 GAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGG--ATATTGTAGTCCGCAAGGGTG 14516086
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
| ||| || | |||||| || ||||| || | |||||||| || || ||||| ||
Sbjct 14516087 CGACCATCCTCTAATTGTTTCCCAGCAAAGATTAACCTTTGCTGGTCCGGTGGAATACCC 14516146
Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAG 563432
||||||||||||||||| ||| || ||||| ||||| | || | | ||| ||
Sbjct 14516147 TCTTTATCTTGAATTTTAGCTTTCACATTATCAATAGTATC-GGAAGATTCAACTTCAAG 14516205
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | || || || || ||||| |||| ||| ||||||||
Sbjct 14516206 GGTGATGGTCTTGCCGGTGAGAGTCTTAATGAATATTTGCAT 14516247
>seq7
Length=28617404
Score = 154 bits (170), Expect = 1e-31
Identities = 566/872 (65%), Gaps = 16/872 (2%)
Strand=Plus/Minus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|| ||| ||| || | ||||| | |||| || ||| ||||| || || |||
Sbjct 12148902 GGCACTTTTGATGTCTCCCTTCTTACCATCGAGGAGGGTATCTTTGAGGTCAAGGCCACT 12148843
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
||| ||| | ||||||||||| || || ||||| || | |||| | ||| | ||
Sbjct 12148842 GCTGGTGATACCCATCTTGGTGGTGAGGACTTTGACAACCGCATGGTCAACCAT--TTTG 12148785
Query 551845 TTGAAGATTTTAAACGAAAAAACAA--AGTTGATCTATCTACATCTGCCAAAGCTCTTCG 551902
| |||| || || |||| ||||| || ||| | | | | | |||||| |
Sbjct 12148784 TCCAAGAGTTCAAGAGAAAGAACAAGAAGGATATCAGTGGGAACC--CTAGGGCTCTTAG 12148727
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
| | || || || || || || || || | |||| || || | ||||||||
Sbjct 12148726 GAGGTTGAGGACAGCATGTGAGAGGGCAAAGAGGACTCTCTCCTCCACAGCACAAACCAC 12148667
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTA-TAATACGCCTATTTCGAGGGCCA 552021
|| || | ||||| || | ||||||||||||| || | | || ||| | || ||||
Sbjct 12148666 GATCGAGATTGATTCCTTGTACGAGGGAATTGATTTCTACTCCACC-ATTACCAGAGCCA 12148608
Query 552022 AATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT 552081
||||| || | || || ||||| || || || || || || |||| |
Sbjct 12148607 GGTTTGAGGAGCTAAACATGGACCTGTTTAGGAAGTGTATGGAGCCTGTGGAG-AAGTGT 12148549
Query 552082 -TAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCT 552140
| || ||| | ||||| || || || || ||||| | || |||||||||||||||
Sbjct 12148548 CTGAGGGATGCCAAGATGGACAAGAGCACTGTCCATGATGTGGTTCTTGTTGGTGGATCT 12148489
Query 552141 ACAAGAATTCCTAAAATTCGCGAAATGTT-AAGTTCTTATTTCAATGGTAAAAAATTAAA 552199
|| ||||| || || ||| | |||| || ||| ||||| || || | |
Sbjct 12148488 ACCAGAATACCAAAGGTTCAGCAGTTGTTGCAGGACTT-CTTCAACGGGAAGGAGCTTTG 12148430
Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259
|||| | ||||| |||||||| |||||||| ||||| || |||| || ||||||||
Sbjct 12148429 CAAAAGCATCAATCCTGATGAGGCAGTTGCCTACGGTGCTGCTGTTCAGGCTGCTATTCT 12148370
Query 552260 TTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATC 552319
| || | | | || || | ||| | | | || | ||||| |||||||| ||
Sbjct 12148369 TAGCGGTGAGGGTAACGAGAAGGTGCAAGACCTGCTTCTGTTGGATGTCACTCCTCTTTC 12148310
Query 552320 TCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTT-ATCGATAGAAATACTACTA 552378
||||||| | || || | |||||| ||||||| |||| || || || ||||| |
Sbjct 12148309 TCTTGGTCTGGAGACTGCTGGAGGAGTTATGAC-CGTCTTAATTCCCAGGAACACTACCA 12148251
Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438
|||| || || | || || ||||| |||||||| || ||| | | ||| |
Sbjct 12148250 TTCCCACGAAGAAGGAACAGGTGTTCTCTACCTATTCAGACAACCAACCGGGTGTCTTGA 12148191
Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498
| || ||| ||| ||||| || | || | ||| || |||| ||||| | |||
Sbjct 12148190 TCCAGGTTTATGAGGGAGAGAGGACCCGGACCAGAGACAACAATCTGCTTGGAAAATTTG 12148131
Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558
| | || ||||| ||||| ||| | || || || || || ||| ||||| |
Sbjct 12148130 AGCTCTCTGGGATTCCACCTGCGCCTAGGGGGGTTCCTCAGATCACGGTTTGCTTCGACA 12148071
Query 552559 TCGATGCCAATGGAATTTTGAATGTGACTGCT 552590
| || |||||||| || |||||||| |||||
Sbjct 12148070 TTGACGCCAATGGTATCTTGAATGTCTCTGCT 12148039
Score = 100 bits (110), Expect = 2e-15
Identities = 96/122 (79%), Gaps = 1/122 (1%)
Strand=Plus/Minus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
||||| || || || || ||||||||||||||| | |||||||| ||||| || |||||
Sbjct 4318631 GCAGTTATCACAGTTCCTGCATATTTTAATGACGCGCAACGTCAGGCTACAAAGGATGCA 4318572
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
|| | ||| |||| || |||| | | |||||||||||||| |||| |||||||||
Sbjct 4318571 GGGAGAATTTCTGGTGTTGATGTGCAAAGAATTATCAATGAACCAACTG-AGCTGCACTT 4318513
Query 550520 GC 550521
||
Sbjct 4318512 GC 4318511
>seq8
Length=35439739
Score = 147 bits (162), Expect = 2e-29
Identities = 555/861 (64%), Gaps = 10/861 (1%)
Strand=Plus/Minus
Query 551735 TGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGA 551794
||| || ||||||| | ||||||| ||| | ||| || |||||| ||| ||
Sbjct 25921375 TGATGTCTCTCTTCTTACAATCGAAGAAGGTATTTTTGAGGTCAAGGCTACTGCTGGTGA 25921316
Query 551795 TTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTAT--CATGGTGTGTTGAAGAT 551852
| |||| |||||||| || |||||||| || || ||||| ||| | ||| ||||
Sbjct 25921315 TACTCACCTTGGTGGTGAGGATTTTGACAACCGAATGGTAAACCAT--TTTGTCCAAGAG 25921258
Query 551853 TTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGA 551912
|| || |||| |||| ||| || | | | ||||||| | | | ||
Sbjct 25921257 TTCAAGAGAAAGCACAAGAAAGATATAAGTGGGAACCCTAGAGCTCTTAGAAGGTTGAGG 25921198
Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972
|| || || || || || || | |||| || || | | |||||||| ||||| |
Sbjct 25921197 ACAGCATGTGAGAGGGCAAAGAGGACTCTCTCCTCCACTGCACAAACCACAATTGAGATT 25921138
Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032
||||| || | ||||| |||||| | || | || | || |||| ||||||||
Sbjct 25921137 GATTCCTTGTACGAGGGTGTTGATTTCTACACCACCATCACCAGAGCCAGGTTTGAAGAG 25921078
Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT-TTTAAGAGATTC 552091
|| || || || || || || || || || || |||| ||| || ||| |
Sbjct 25921077 CTTAACATGGACCTGTTCAGGAAGTGCATGGATCCTGTCGAG-AAGTGTTTGAGGGATGC 25921019
Query 552092 AAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCC 552151
||||| || || || || |||| | || ||||||||||| ||||| ||||||||
Sbjct 25921018 CAAGATGGACAAGAGCAGTGTCGATGATGTGGTTCTTGTTGGTGGGTCTACCAGAATTCC 25920959
Query 552152 TAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTA 552210
|| ||| || || | || ||| |||||||||||| | || ||||| |||
Sbjct 25920958 AAAGGTTCAGCAACTGCTGCAGGACTT-TTTCAATGGTAAGGAGCTATGCAAAAGTATTA 25920900
Query 552211 ATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAA 552270
|||| || ||||| ||||| |||||||| || |||| || || |||||| || |
Sbjct 25920899 ATCCTGACGAGGCAGTTGCTTATGGTGCTGCTGTTCAGGCTGCAATTCTTAGCGGTGAGG 25920840
Query 552271 CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAG 552330
|||| || | || | | | || | ||||| || ||||| ||||||||| | |
Sbjct 25920839 GCAATGAGAAGGTTCAGGACCTGCTTCTGTTGGATGTCACGCCTCTCTCTCTTGGTCTGG 25920780
Query 552331 AAACAGTTGGAGGTATTATGACTAATCTT-ATCGATAGAAATACTACTATTCCTTGTAAA 552389
| || | ||||| | |||||| |||| || || || || || || || ||
Sbjct 25920779 AGACCGCGGGAGGAGTCATGACT-GTCTTGATTCCCAGGAACACCACCATCCCCACAAAG 25920721
Query 552390 AAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTT 552449
|| | || || ||||| || || || || ||| | | ||| ||||| |||
Sbjct 25920720 AAGGAGCAAGTCTTCTCTACCTACTCTGACAACCAACCCGGTGTCCTGATTCAGGTTTAC 25920661
Query 552450 GAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGT 552509
|| || || || | || | ||| || |||| || || | || | | ||
Sbjct 25920660 GAGGGTGAGAGGACGAGGACCAGAGACAACAATCTGCTGGGCAAATTCGAACTCTCTGGA 25920601
Query 552510 ATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAAT 552569
||||| ||||||||| | || || || || || ||| || || || |||||||||
Sbjct 25920600 ATTCCACCTGCTCCTAGGGGTGTTCCTCAGATCACCGTTTGCTTTGACATTGATGCCAAT 25920541
Query 552570 GGAATTTTGAATGTGACTGCT 552590
|| || ||||| || |||||
Sbjct 25920540 GGTATCTTGAACGTCTCTGCT 25920520
Score = 116 bits (128), Expect = 3e-20
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369
|| || ||||| | ||| | ||||| || ||||| || ||||| ||||| ||| ||
Sbjct 25921662 AAGCAGTTTTCTGCTGAAGAGATTTCTTCCATGGTCTTGATGAAGATGAAGGAAATTGCT 25921603
Query 550370 AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAAT 550429
|| | | || | || | | |||| || | ||||| || || || |||||
Sbjct 25921602 GAGGCATACCTGGGATCTGTCGTCAAGAATGCTGTTGTCACTGTTCCTGCTTACTTTAAC 25921543
Query 550430 GACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGT 550489
|||||||| || || || |||||||||||||| ||| |||| ||||||||| | |
Sbjct 25921542 GACTCACAGCGCCAGGCCACTAAAGATGCTGGTGTCATTTCTGGTCTTAATGTTATGAGG 25921483
Query 550490 ATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536
||||||||||| || ||||||||||| | || ||||| ||||| ||
Sbjct 25921482 ATTATCAATGAGCCCACTGCTGCTGCTATCGCTTATGGTCTTGACAA 25921436
>seq3
Length=30470407
Score = 122 bits (134), Expect = 7e-22
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCA 550402
||||| | || |||||| |||| || ||| | |||| | |||| | | ||
Sbjct 9252528 GTTTTGACAAAGATGAAAGAAACTGCTGAATCTTATCTTGGGAAGTCAGTTTCAAAGGCT 9252587
Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462
|| || ||||| || |||||||||||||| | |||||||| ||||| || ||||| ||
Sbjct 9252588 GTTATCACTGTTCCTGCATATTTTAATGATGCCCAACGTCAGGCTACAAAGGATGCAGGG 9252647
Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCA 550522
| |||||||| ||| |||| | | |||||||||||||| ||||||||||| |||||
Sbjct 9252648 AGGATTGCTGGTCTTGATGTACAAAGAATTATCAATGAACCAACTGCTGCTGCGCTTGCC 9252707
Query 550523 TATGG 550527
|||||
Sbjct 9252708 TATGG 9252712
Score = 89.7 bits (98), Expect = 4e-12
Identities = 119/163 (73%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050
|| ||| || |||||| | || ||||| || |||||||||||| | | || ||| |
Sbjct 26828638 AGTTATTGGGATAGATCTTGGCACCACCTACTCTTGTGTTGGTGTCTATAAGAACGGTCA 26828697
Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110
||||| || || |||||||| ||||| ||| | | || ||||||| || |||||||
Sbjct 26828698 TGTTGAGATCATAGCCAATGACCAAGGAAACCGCATCACCCCATCTTGGGTGGCTTTCAC 26828757
Query 550111 GGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGC 550152
|| |||| | ||| | ||||||| || ||||| |||| ||
Sbjct 26828758 TGATTCTGAGAGATTGA-TTGGTGAGGCCGCAAAGAATCAGGC 26828799
>seq6
Length=34899179
Score = 116 bits (128), Expect = 3e-20
Identities = 121/158 (77%), Gaps = 3/158 (2%)
Strand=Plus/Minus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| | || || || || || || ||||| ||||| ||||| ||| | ||| ||
Sbjct 8273027 GTTACCAAAGCCGTGATTACAGTGCCTGCATACTTTAACGACTCGCAAAGGACAGCAACA 8272968
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
||||||||||| ||||||||||| || |||| |||||||| |||||||| || || |||
Sbjct 8272967 AAAGATGCTGGGCGTATTGCTGGTCTGGATGTCCTTCGTATCATCAATGAGCCAACAGCT 8272908
Query 550511 GCTGCACTTGCATATGGACTTG---ATAAACATAATGA 550545
|| || | ||||||||| ||| | ||| |||||||
Sbjct 8272907 GCATCATTGGCATATGGATTTGAGAAGAAAAATAATGA 8272870
Score = 107 bits (118), Expect = 2e-17
Identities = 130/177 (73%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411
|| ||||| ||||||| |||| | ||||| || ||| | | ||||| || |||
Sbjct 34375693 AAGATGAAGGAAACAGCAGAGGCTTATCTTGGTAAATCTGTTTCAAAGGCAGTCATCACT 34375634
Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471
|| || ||||| |||||||| |||| ||||| || || || ||||| || | ||||||
Sbjct 34375633 GTCCCTGCATACTTTAATGATGCACAGCGTCAGGCAACAAAGGATGCAGGGAGGATTGCT 34375574
Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
|| || | || || | |||||||| || || ||||||||||| ||| | ||||||
Sbjct 34375573 GGGCTCGAGGTCCTGAGGATTATCAACGAGCCCACTGCTGCTGCCCTTTCGTATGGA 34375517
Score = 105 bits (116), Expect = 5e-17
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| | |||||| | ||||| || ||||||||||||||||| ||| | ||||||
Sbjct 28741396 GTTACAAAAGCAGTAGTTACTGTTCCTGCATATTTTAATGACTCCCAAAGGACAGCTACA 28741337
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|| |||||||| ||||||||||| | | || ||||| || || ||||| || || |||
Sbjct 28741336 AAGGATGCTGGTCGTATTGCTGGTTTAGAAGTCCTTCGGATCATTAATGAGCCGACAGCT 28741277
Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536
|| || | ||||| || |||| ||
Sbjct 28741276 GCATCATTGGCATACGGTTTTGAAAA 28741251
Score = 100 bits (110), Expect = 2e-15
Identities = 158/222 (71%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313
||| ||||||||||| || ||||| ||| ||||| || ||||| ||||| || ||
Sbjct 13144381 GAGGCGGAGTACAAGGTGGAGGGTGGACTCCTTTTGG--ATGTTGTAGTCAGCAAGGGTG 13144324
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
| ||| |||||||| || || ||||| || | |||||||| || || || |||||
Sbjct 13144323 CGGCCATCCTCAAGTTGCTTGCCAGCAAATATCAACCTTTGCTGGTCCGGGGGTATTCCC 13144264
Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAG 563432
|| ||||| || || || ||| || ||||| || |||| | || | | || ||
Sbjct 13144263 TCCTTATCCTGGATCTTGGCTTTGACATTGTCAATGGTGTCAGAG-GATTCAACCTCAAG 13144205
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | || || ||||| |||||||| || || ||||||||
Sbjct 13144204 GGTGATCGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 13144163
>seq4
Length=30051516
Score = 114 bits (126), Expect = 1e-19
Identities = 102/128 (80%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
|| || || || || || |||||||||||||| |||||||||| ||||| || |||||
Sbjct 20649125 GCTGTTATCACCGTTCCTGCATATTTTAATGATGCACAACGTCAGGCTACAAAGGATGCA 20649184
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
||| ||||| || || |||||| | |||||||||||||| ||||| |||||||||
Sbjct 20649185 GGAAAAATTGCCGGTCTCGATGTTCAAAGAATTATCAATGAACCAACTGCAGCTGCACTT 20649244
Query 550520 GCATATGG 550527
|| |||||
Sbjct 20649245 GCTTATGG 20649252
Score = 107 bits (118), Expect = 2e-17
Identities = 103/132 (78%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 361706 CCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCT 361765
|||||||| | || ||| || |||||||| || || ||| | ||||| ||| || ||
Sbjct 20649252 CCATAAGCAAGTGCAGCTGCAGTTGGTTCATTGATAATTCTTTGAACATCGAGACCGGCA 20649193
Query 361766 ATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTA 361825
|||||| |||||| || || |||||||||||||||||||||||||||||||| ||
Sbjct 20649192 ATTTTTCCTGCATCCTTTGTAGCCTGACGTTGTGCATCATTAAAATATGCAGGAACGGTG 20649133
Query 361826 ATCACTGCTTTT 361837
|| || || |||
Sbjct 20649132 ATAACAGCCTTT 20649121
Score = 102 bits (112), Expect = 7e-16
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053
||| || |||||| | || ||||| || |||||||||||| | | ||||| | ||
Sbjct 8716696 TATTGGGATAGATCTTGGCACCACCTACTCTTGTGTTGGTGTCTACAAGAATGGCCATGT 8716755
Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113
||||| || |||||||| ||||| ||| | | ||| || || | || | ||||| ||
Sbjct 8716756 GGAAATCATAGCCAATGACCAAGGAAACCGCATTACCCCTTCGTGGGTGGCGTTCACTGA 8716815
Query 550114 AACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATA 550172
|||| | ||| | ||||||| || ||||| ||| || ||| |||||| | |
Sbjct 8716816 TTCTGAGAGATTGA-TTGGTGAGGCTGCAAAGAATCTGGCAGCTGTGAATCCTGAAAGGA 8716874
Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAGAA 550205
| |||||||||| ||| | ||||||||||||
Sbjct 8716875 CCATTTTTGATGTCAAAAGACTAATTGGAAGAA 8716907
>seq1335
Length=244505
Score = 107 bits (118), Expect = 2e-17
Identities = 130/177 (73%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411
|| ||||| |||| || |||| | ||||| || ||| || | || || || |||
Sbjct 206776 AAGATGAAGGAAACCGCAGAGGCTTATCTTGGTAAATCTGTTTCGAAGGCTGTCATCACT 206835
Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471
|| || || || || ||||| |||| || || ||||| || ||||| || | ||||||
Sbjct 206836 GTTCCCGCCTACTTCAATGATGCACAGCGCCAGGCTACAAAGGATGCAGGGAGAATTGCT 206895
Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
|| ||| | || ||| | ||||||||||| || ||||| ||||||||| | ||||||
Sbjct 206896 GGGCTTGAAGTCCTTAGGATTATCAATGAGCCAACTGCAGCTGCACTTTCCTATGGA 206952
>seq2
Length=22054697
Score = 91.5 bits (100), Expect = 1e-12
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || | || || || || || || || ||||| || || || || || || ||||
Sbjct 17228837 ATGCGGTGGTGACGGTCCCTGCCTACTTCAACGACTCGCAGCGGCAGGCCACAAAGGATG 17228896
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
| ||| ||||| || || |||||||| || || |||||||| || |||||||||||
Sbjct 17228897 CCGGAGTCATTGCGGGGCTCAATGTTCTGCGGATCATCAATGAGCCCACTGCTGCTGCCA 17228956
Query 550518 TTGCATATGGACTTGATAAA 550537
|||| ||||| || || |||
Sbjct 17228957 TTGCCTATGGTCTGGACAAA 17228976
>seq5
Length=29377369
Score = 87.8 bits (96), Expect = 1e-11
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 550421 TATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAAT 550480
|| || ||||| | || | || || || || ||||||||| |||||||| | |||
Sbjct 8770549 TACTTCAATGATGCCCAGAGGCAGGCCACCAAGGATGCTGGAATAATTGCTGGTCCGAAT 8770490
Query 550481 GTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536
||| | |||||||||||||| ||||||||||| |||||||||||||||| ||
Sbjct 8770489 GTTGCAAGGATTATCAATGAACCGACTGCTGCTGCTATTGCATATGGACTTGACAA 8770434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028912111341910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |