Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_016656.1
Length=45890
Score E
Sequences producing significant alignments: (Bits) Value
seq1042 91.5 4e-14
seq10 87.8 5e-13
>seq1042
Length=564079
Score = 91.5 bits (100), Expect = 4e-14
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 26243 GGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATG 26302
|| ||||| ||| || ||||| ||||||| || |||||||||||||| |||| |||
Sbjct 550860 GGTCAAGGAAGTGTTTCAGATGGTATGCCTCACGGAATCTCTGGTACTTTCCACTTCATG 550801
Query 26303 TTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCT 26362
| |||||||| || || || || || || ||||||||||| | ||| ||| |||||
Sbjct 550800 ATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTAACATGTTAGGTTTTGCT 550741
Query 26363 GGG 26365
|||
Sbjct 550740 GGG 550738
>seq10
Length=33665772
Score = 87.8 bits (96), Expect = 5e-13
Identities = 89/115 (77%), Gaps = 2/115 (2%)
Strand=Plus/Plus
Query 26261 GATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAA 26320
||||| |||||| | || || ||||||||||| ||||| ||| | |||||||| ||||||
Sbjct 4332895 GATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCAGAA 4332954
Query 26321 CATAATATACTCATGCACCCATTCCATATGGCTGGTGTTG--CTGGGGTTTTCGG 26373
|| || || || ||||| | ||| || ||| ||||| | |||| || |||||
Sbjct 4332955 CACAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTCTGGTGTATTCGG 4333009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146713752092616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |