Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_020855.1
Length=192497
Score E
Sequences producing significant alignments: (Bits) Value
seq1382 131 2e-25
seq9 102 1e-16
>seq1382
Length=172696
Score = 131 bits (144), Expect = 2e-25
Identities = 240/343 (70%), Gaps = 19/343 (6%)
Strand=Plus/Minus
Query 8029 TTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAACCAAACACATACAACTGGG 8088
|| ||||| || ||||| |||| |||||| | || || | ||| | || | ||||||
Sbjct 123837 TTGAGGTTGAAAGCCATGGTGCTAATACCTAAAGCTGTGACCCAGATACCAATAACTGGC 123778
Query 8089 AATGTAGCGAGGAAG--AAGTGAAGACTT--CTACTGTTGTT-AAACGATGCATACTGGA 8143
| | || | ||| | || |||| | | | |||||| |||| | ||||| ||||
Sbjct 123777 CAAGCTGCCAAGAATCCATGTCAAGAAGTAGCGAGAGTTGTTGAAACTA-GCATATTGGA 123719
Query 8144 AGATTAATCTACCAAAGTATCCATGAGCAGCAACAATA-----TTATAGGTCTCTTC--- 8195
||| |||| | || || ||||||||||| |||||| || || ||||||||
Sbjct 123718 GGATCAATCGGCTTAAATAACCATGAGCAGCTACAATACTCTATTGTAAGTCTCTTCCTT 123659
Query 8196 -TTCTTGACCAAACTTATAACCATAGTTCTG-AGACTCTTCTTCAGTTGTCTCTCTGATT 8253
||||||||| || | ||||| | | || ||| || | |||||| || || |||||
Sbjct 123658 CTTCTTGACCGAATCTGTAACC-TGCTAATGCAGATTCGTTTTCAGTGGTTTCCCTGATC 123600
Query 8254 AGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACC- 8312
| | ||| || || || ||||| |||||||||||||| || || || ||||| | |||
Sbjct 123599 AAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCA 123540
Query 8313 -TGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATG 8354
|||| ||| ||| | || ||||||||||| ||||| ||
Sbjct 123539 GAGCTAGACCTAACATGTTCAATGGATGCATAAGGATGTTGTG 123497
>seq9
Length=34148863
Score = 102 bits (112), Expect = 1e-16
Identities = 149/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 8304 GAACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTG 8363
||| | ||| | ||| ||| ||| || | |||||||||| ||||| || ||||| |
Sbjct 1507159 GAATACACCAGTTACACCTAACATGTGAACCAGATGCATAAGGATGTTGTGTTCTGCCAG 1507100
Query 8364 GAATACGA-ACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATG 8422
||||| | |||||||||| || | | ||| || |||| |||||| |||||||||||
Sbjct 1507099 AAATACAATACATGAAGTTGAAA-TGCTAGATATTCCTAAAGGCATACCATCAGAGAAAC 1507041
Query 8423 AACCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTAT 8482
|| ||||||| || || | ||||| || || |||||| | || ||||| ||
Sbjct 1507040 TTCCTTGACCAATAGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAAT 1506981
Query 8483 ATGCTACACAGATCCATGGTCTCATACC 8510
|||| ||| ||||| || | ||||||
Sbjct 1506980 ATGCAACAGCAATCCAAGGACGCATACC 1506953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 615806518185480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |