Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq10 132 9e-26
>seq10
Length=33665772
Score = 132 bits (146), Expect = 9e-26
Identities = 139/183 (76%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
|||||| || || | | || || |||| || |||||||| |||||||||||||| ||
Sbjct 14516065 GATATTGTAGTCCGCAAGGGTGCGACCATCCTCTAATTGTTTCCCAGCAAAGATTAACCT 14516124
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
|| || || ||||| || || ||||||||||| |||||| ||| |||||| ||||
Sbjct 14516125 TTGCTGGTCCGGTGGAATACCCTCTTTATCTTGAATTTTAGCTTTCACATTATCAATAGT 14516184
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
||| || ||||| ||||| || || ||||| || || || | || ||||| ||||| ||
Sbjct 14516185 ATCGGAAGATTCAACTTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTAATGAATATTTG 14516244
Query 192534 CAT 192536
|||
Sbjct 14516245 CAT 14516247
Score = 89.7 bits (98), Expect = 1e-12
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 192403 AAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACA 192462
||||| || |||||||| || || || || || || || ||||| || || ||||||
Sbjct 14516990 AAGATCAACCTCTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGGCCTTTACA 14517049
Query 192463 TTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTA 192522
||| |||| || || ||||| || || || || ||||| || || |||| ||| |||
Sbjct 14517050 TTATCAATAGTGTCAGAAGATTCAACCTCAAGGGTGATGGTCTTGCCGGTTAGTGTCTTA 14517109
Query 192523 ATAAATATCTGCATTTTATTAGAAAAA 192549
| |||||||||||| | | || || ||
Sbjct 14517110 ACAAATATCTGCATCTGAATAAAATAA 14517136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984388437514650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |