Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq10 132 9e-26 >seq10 Length=33665772 Score = 132 bits (146), Expect = 9e-26 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| || || | | || || |||| || |||||||| |||||||||||||| || Sbjct 14516065 GATATTGTAGTCCGCAAGGGTGCGACCATCCTCTAATTGTTTCCCAGCAAAGATTAACCT 14516124 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 || || || ||||| || || ||||||||||| |||||| ||| |||||| |||| Sbjct 14516125 TTGCTGGTCCGGTGGAATACCCTCTTTATCTTGAATTTTAGCTTTCACATTATCAATAGT 14516184 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || ||||| ||||| || || ||||| || || || | || ||||| ||||| || Sbjct 14516185 ATCGGAAGATTCAACTTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTAATGAATATTTG 14516244 Query 192534 CAT 192536 ||| Sbjct 14516245 CAT 14516247 Score = 89.7 bits (98), Expect = 1e-12 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 192403 AAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACA 192462 ||||| || |||||||| || || || || || || || ||||| || || |||||| Sbjct 14516990 AAGATCAACCTCTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGGCCTTTACA 14517049 Query 192463 TTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTA 192522 ||| |||| || || ||||| || || || || ||||| || || |||| ||| ||| Sbjct 14517050 TTATCAATAGTGTCAGAAGATTCAACCTCAAGGGTGATGGTCTTGCCGGTTAGTGTCTTA 14517109 Query 192523 ATAAATATCTGCATTTTATTAGAAAAA 192549 | |||||||||||| | | || || || Sbjct 14517110 ACAAATATCTGCATCTGAATAAAATAA 14517136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984388437514650