Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq10 136 7e-27
>seq10
Length=33665772
Score = 136 bits (150), Expect = 7e-27
Identities = 123/155 (79%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| || |||||||| |||||||| ||||| || || ||||| ||||| || || ||||||
Sbjct 14516093 TCCTCTAATTGTTTCCCAGCAAAGATTAACCTTTGCTGGTCCGGTGGAATACCCTCTTTA 14516152
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
||||| |||||| ||| |||||| |||||||| || ||||| ||||| || || |||
Sbjct 14516153 TCTTGAATTTTAGCTTTCACATTATCAATAGTATCGGAAGATTCAACTTCAAGGGTGATG 14516212
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || | || ||||||||||| |||||
Sbjct 14516213 GTCTTGCCGGTGAGAGTCTTAATGAATATTTGCAT 14516247
Score = 89.7 bits (98), Expect = 9e-13
Identities = 108/146 (74%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 171936 AAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACA 171995
|| || || ||||||||||| || || || || || || ||||| || || ||||||
Sbjct 14516990 AAGATCAACCTCTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGGCCTTTACA 14517049
Query 171996 TTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTA 172055
||| ||||| || || ||||| || || || || ||||| || || |||| ||| |||
Sbjct 14517050 TTATCAATAGTGTCAGAAGATTCAACCTCAAGGGTGATGGTCTTGCCGGTTAGTGTCTTA 14517109
Query 172056 ATGAATATCTGCATTTTATTATAAAA 172081
| ||||||||||| | | ||||||
Sbjct 14517110 ACAAATATCTGCATCTGA--ATAAAA 14517133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905053870222200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |