Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq10 136 7e-27 >seq10 Length=33665772 Score = 136 bits (150), Expect = 7e-27 Identities = 123/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || |||||||| |||||||| ||||| || || ||||| ||||| || || |||||| Sbjct 14516093 TCCTCTAATTGTTTCCCAGCAAAGATTAACCTTTGCTGGTCCGGTGGAATACCCTCTTTA 14516152 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| |||||| ||| |||||| |||||||| || ||||| ||||| || || ||| Sbjct 14516153 TCTTGAATTTTAGCTTTCACATTATCAATAGTATCGGAAGATTCAACTTCAAGGGTGATG 14516212 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || | || ||||||||||| ||||| Sbjct 14516213 GTCTTGCCGGTGAGAGTCTTAATGAATATTTGCAT 14516247 Score = 89.7 bits (98), Expect = 9e-13 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 171936 AAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACA 171995 || || || ||||||||||| || || || || || || ||||| || || |||||| Sbjct 14516990 AAGATCAACCTCTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGGCCTTTACA 14517049 Query 171996 TTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTA 172055 ||| ||||| || || ||||| || || || || ||||| || || |||| ||| ||| Sbjct 14517050 TTATCAATAGTGTCAGAAGATTCAACCTCAAGGGTGATGGTCTTGCCGGTTAGTGTCTTA 14517109 Query 172056 ATGAATATCTGCATTTTATTATAAAA 172081 | ||||||||||| | | |||||| Sbjct 14517110 ACAAATATCTGCATCTGA--ATAAAA 14517133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905053870222200