Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 1e-12 >seq5 Length=29377369 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||||||||||||||| | || || || ||||| ||| | || |||| ||| Sbjct 457756 ATGCAAATTTTTGTCAAAACCCTCACCGGAAACACCATCACCCTGGAGGTGGAGAGCTCA 457815 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | | | ||| |||||| || || || ||| | | |||||| Sbjct 457816 -GACACGATCGCCAATCTTAAAGCAAAGATCCATGACAAGGAGGGCATCTCACCGGATCA 457874 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | ||| || |||||||| ||||| | | || ||| ||||||| Sbjct 457875 GCAGAGGCTCATCTTTGCCGGGAAACAGCTCGAGGATGGCCGCACTCTGGACGACTACAG 457934 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 |||||| ||||| || || | ||| |||| Sbjct 457935 CATTCAGAAGGAATCCACTCTTCACCTGGT 457964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398841511743451