Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq5 87.8 1e-12
>seq5
Length=29377369
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
|||||||||||||||||||| | || || || ||||| ||| | || |||| |||
Sbjct 457756 ATGCAAATTTTTGTCAAAACCCTCACCGGAAACACCATCACCCTGGAGGTGGAGAGCTCA 457815
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || ||| | | | ||| |||||| || || || ||| | | ||||||
Sbjct 457816 -GACACGATCGCCAATCTTAAAGCAAAGATCCATGACAAGGAGGGCATCTCACCGGATCA 457874
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| || || | ||| || |||||||| ||||| | | || ||| |||||||
Sbjct 457875 GCAGAGGCTCATCTTTGCCGGGAAACAGCTCGAGGATGGCCGCACTCTGGACGACTACAG 457934
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764
|||||| ||||| || || | ||| ||||
Sbjct 457935 CATTCAGAAGGAATCCACTCTTCACCTGGT 457964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398841511743451
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |