Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 1e-11 >seq1 Length=27573629 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/152 (74%), Gaps = 5/152 (3%) Strand=Plus/Plus Query 304987 TAAAGG-TAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTG 305045 |||||| |||||| || || ||| ||||||| | |||||||| |||||||||||| | Sbjct 11247821 TAAAGGCTAAAGAAGGCCGAATTAGAGGTAACTTGATGGGAAAGCGTGTTGATTTTTCAG 11247880 Query 305046 CAAGAAGTGTAATCACACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTG 305105 || ||| || || |||||||| || ||| | || ||||| | |||||||| ||| Sbjct 11247881 CACGAACAGTTATTACACCTGACCCTACAATCAACATTGATGAACTCGGAGTTCC--TTG 11247938 Query 305106 AA--ATTGCTTTAAAACTAACATTTCCAGAGA 305135 | || ||||| || || || | ||||||| Sbjct 11247939 GAGCATAGCTTTGAATCTTACGTACCCAGAGA 11247970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186702419362899