Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq6 93.3 1e-13
>seq6
Length=34899179
Score = 93.3 bits (102), Expect = 1e-13
Identities = 130/180 (72%), Gaps = 3/180 (2%)
Strand=Plus/Plus
Query 443693 TCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGG 443752
||||| |||| |||||| || || || || || ||||| ||| | || || |||
Sbjct 15336855 TCTCA--TTCGCCGAGCGCCTCGTTGCCTTCGCCTGCGTCGAGGGAGTCTTCTTCTCCGG 15336912
Query 443753 CAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTA 443812
| ||| || ||||||||||| | || ||||| || || |||| ||||| |||||
Sbjct 15336913 CTCCTTCTGCG-CCATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCGGGTCTCACCTTCT 15336971
Query 443813 GTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872
||||| || ||| || |||||||| | || |||||||||||||| || |||||||
Sbjct 15336972 CAAACGAGCTCATCTCCCGTGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACA 15337031
Score = 87.8 bits (96), Expect = 6e-12
Identities = 124/173 (72%), Gaps = 1/173 (1%)
Strand=Plus/Plus
Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758
||||| ||||||||| ||||| || || ||||| || | || || |||| |||
Sbjct 4328577 CTTCGCCGAGCGACTCGTCGCCTTCGCCTGCGTCGAGGGCATCTTTTTCTCCGGCTCCTT 4328636
Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818
|| ||||||||||| | || ||||| || || |||| |||||| ||||| ||||
Sbjct 4328637 CTGCG-CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTCACCTTCTCCAACG 4328695
Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871
| || ||| || |||||||| | || |||||||| || || || || |||
Sbjct 4328696 AGCTCATCTCCCGTGACGAGGGCCTTCACTGCGACTTTGCTTGCCTCCTTTAC 4328748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588188275321255
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |