Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq3338 637 6e-178 seq2660 154 2e-32 seq2678 132 6e-26 seq10 132 6e-26 seq9 129 7e-25 seq1063 127 3e-24 seq7 107 2e-18 seq1382 105 8e-18 seq1042 98.7 1e-15 seq1024 89.7 6e-13 >seq3338 Length=30856 Score = 637 bits (706), Expect = 6e-178 Identities = 1514/2273 (67%), Gaps = 111/2273 (5%) Strand=Plus/Minus Query 183935 TTATTCACCCATCATATGTGGATAGGTGGTTTTCTTATTGTGGGTGCATCAGCACATGCT 183994 || ||||| ||||| |||||||| ||||| ||||| || || ||||| | |||||||| Sbjct 30824 TTGTTCACACATCACATGTGGATCGGTGGGTTTCTCATAGTTGGTGCTGCTGCACATGCA 30765 Query 183995 TCAATTGCTATGATAAGAGACTATAATCC---TGTTCAACATATGGGAAATGTATTAGAT 184051 ||||| |||| ||||||| || |||| | || | | | | || |||||||| Sbjct 30764 GCAATTTTTATGGTAAGAGATTACGATCCAACTACTCGATACAACG---ATCTATTAGAT 30708 Query 184052 AGAATACTTAAATCTAGAGATGCAATCATCAGTCACTTGAACTGGGTATGCATCTTTTTA 184111 | | |||| | | ||||||||||| || | ||||||| ||| || ||| | Sbjct 30707 CGTGTCCTTAGACACCGCGATGCAATCATATCACATCTTAACTGGGCATGTATATTTCTG 30648 Query 184112 GGTTTTCATAGTTTTGGTCTTTATATTCACAATGATATTATGAGAGCATTGGGTAGACCT 184171 |||||||| |||||||| | |||||||| ||||||| ||||| || || || | || Sbjct 30647 GGTTTTCACAGTTTTGGCTTGTATATTCATAATGATACCATGAGCGCTTTAGGGCGTCCA 30588 Query 184172 AATGATCTATTCAGTGATACAGCAATACAATTACAACCTGTATTTGCACAGTCTGTTCAG 184231 | ||| | || ||||| || |||||||||||||| | ||||| || | || || Sbjct 30587 CAAGATATGTTTTCAGATACCGCTATACAATTACAACCCATCTTTGCTCAATGGGTACAA 30528 Query 184232 AGATTACATGCTTCATTAT-----ATAATGTCTC-TGATGTATTTGGTGGATCAACCACA 184285 | ||||||| | | |||| ||| || || | | | | | | | Sbjct 30527 AACACCCATGCTTTAGCACCCGGCATAACAGCTCCTGGTGCAACAGCAAGTACCAGCTTA 30468 Query 184286 AT---GGTTGGTGGTAAGATTG-------------CTAAT--GCT------CCTTTTGTA 184321 | || |||||| || | | | || ||| ||| || | Sbjct 30467 ACTTGGGGAGGTGGTGAGTTGGTAGCAGTAGGCGGCAAAGTAGCTTTGTTACCTATTCCA 30408 Query 184322 CTAGGTACAGCAGACTTTATGATACATCACATACACGCTTTCCAGATTCATGTTTGTGTA 184381 |||| || |||||||| | | ||||| || || || || ||| || || |||| Sbjct 30407 TTAGGAACCGCAGACTTCTTAGTCCATCATATTCATGCATTTACGATCCACGTGACTGTA 30348 Query 184382 TTAATTCTTCTCAAGGGTGTTTTATACTCTAGAAACTCACAATTAATACCAGATAAGAGT 184441 || || || || || |||||| ||| || | | || | || ||||| ||||| || Sbjct 30347 TTGATACTACTGAAAGGTGTTCTATTTGCTCGCAGTTCCCGTTTGATACCTGATAA-AGC 30289 Query 184442 AAGT-TAGGATTCAGATTCCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATC 184500 || | | || || | || ||||||||||| ||||| ||||| || || ||||| ||||| Sbjct 30288 AAATCTTGGTTTTCGTTTTCCTTGTGATGGACCTGGAAGAGGGGGGACATGTCAAGTATC 30229 Query 184501 AGGATGGGATCATGTATTCCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAAT 184560 | ||||||||||| ||| | ||| ||||||||||||| ||| || || |||| || Sbjct 30228 TGCCTGGGATCATGTCTTCTTAGGTCTATTCTGGATGTACAATGCGATTTCCGTAGTTAT 30169 Query 184561 CTTCCACTTTAGTTGGAGAATGCAA---GATGTATGGGGT-CTAT--------------- 184601 ||||| || ||||||| |||||| ||||| |||||| |||| Sbjct 30168 TTTCCATTTCAGTTGGAAAATGCAGTCGGATGTTTGGGGTACTATAAGTGATCAAGGGGT 30109 Query 184602 --------------CAGGAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTT 184647 ||||||| |||||||| |||||||| ||||| || ||||| ||| | Sbjct 30108 AGTAACTCATATTACAGGAGGAAACTTTGCGCAGAGTTCCATTACTATTAATGGGTGGCT 30049 Query 184648 GAGAGACTTCTTATGGTCACAGTCAAGTCAAGTTCTCAATAGTTATGGA-CAAGAC-ATC 184705 |||| ||||||||| ||||| || ||| || | | |||||| | | ||| Sbjct 30048 TCGAGATTTCTTATGGGCACAGGCATCTCAGGTAATTCAGTCTTATGGTTCTTCATTATC 29989 Query 184706 AGCATGTATGGTTTGCTATTTCTT-GGAGCACATTTTGTATGGGCATTCAGTTTGATGTT 184764 |||| ||||| | || |||||| || || |||||||| ||||| |||||||| ||||| Sbjct 29988 TGCAT--ATGGTCT-CTTTTTCTTAGGTGCTCATTTTGTCTGGGCTTTCAGTTTAATGTT 29932 Query 184765 CCTATGGAGTGGTAGAGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAA 184824 |||| ||||| | || || |||||||| | || || || || | |||||| ||||| Sbjct 29931 TCTATTCAGTGGCCGTGGTTATTGGCAAGAACTCATTGAATCCATCGTTTGGGCTCATAA 29872 Query 184825 CAAATTAAAACTTGCACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGC 184884 |||||||||| |||| ||| | | ||| || ||||| || ||| |||||||||||| Sbjct 29871 CAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTACAAGGACGTGC 29812 Query 184885 TGTTGGAGTTGCACACTTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGC 184944 ||| ||||| | || | | | || || || |||||||||||||||||||||||||| || Sbjct 29811 TGTAGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCATTCTTCTTAGC 29752 Query 184945 TCACCTTATCCCCTTAAGTTAAATCATGGCTA-------CTAAAA-------------CA 184984 |||| | ||| || ||||||| | ||| | Sbjct 29751 AAGAATTAT----TGCAGTAGGATAATGGCTAGGAGGATTTGAAAGGCATTATGGCATTA 29696 Query 184985 AAATTTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTGGTAT 185044 | |||||| | |||| |||| || || || || || ||| | | | |||| | Sbjct 29695 AGATTTCCGAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTT 29636 Query 185045 GGATTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGT-TATA 185103 || | || || ||||||||||| ||||||||||| |||| || || || | || | || Sbjct 29635 GGTATTGCTACCGCACATGACTTCGAGAGTCATGATGATATTACTGAGGA-ACGTCTTTA 29577 Query 185104 TCAAAAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGG 185163 ||| || | |||||| | |||||||| || | ||||| |||||||| ||| | || Sbjct 29576 TCAGAACATTTTTGCTTCTCACTTTGGGCAATTAGCAATAATCTTTCTGTGGACGTCCGG 29517 Query 185164 TAATTTAATTCATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACAACA 185223 ||| | ||||| |||| |||||||| || ||||| | || |||||| ||| Sbjct 29516 AAATCTCTTTCATGTAGCTTGGCAAGGAAATTTTGAGTCATGGATACAAGACCCTTTACA 29457 Query 185224 TGTGATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGATGC 185283 ||| | |||||| || ||| ||| ||||||||||||||||||||| || ||| || Sbjct 29456 TGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCAGCTGTAGAAGC 29397 Query 185284 ATACACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCATTG 185343 | || | | |||| |||| ||| ||||| | ||||| || | ||||| || Sbjct 29396 CTTTACTCGAGGAGGTGCTACCGGTCCAGTGAATATCGCTTATTCCGGCGTTTATCAGTG 29337 Query 185344 GTGGTACACAGTTGGTATGAGAACTAATATGCAACTGTATACTGGTGGTGCATTTATGAT 185403 |||||| ||| | || | | |||||| | || |||||||| | | ||| | | Sbjct 29336 GTGGTATACAATCGGATTACGCACTAATGAAGATCTTTATACTGGAGCTCTTTTTCTATT 29277 Query 185404 TCTACTAGCATTGGTATCTTTACTTGGTGCTCAATTACATCTGAAACCAAAGTTTGCACC 185463 | || | |||| ||| | | | | ||||| | ||||||| | | | | Sbjct 29276 ATTTCTTTCTGCTATATCCTTAATAGCGGGTTGGTTACACTTACAACCAAA-ATGGAAAC 29218 Query 185464 TAAGC-TTGCTTGGTTTAAAGATAATGAGAACAGATTAAATCATCATCTATCAGTTCTAT 185522 |||| || | ||||| ||| || || | ||||||||||| | |||| || | Sbjct 29217 CAAGCGTTTCGTGGTTCAAAAATGCCGAATCTCGTCTAAATCATCATTTGTCAGGACTTT 29158 Query 185523 TTGGATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGCATCAA 185582 | ||| | |||||| | || ||| | || ||||| | || || || || || | ||| | Sbjct 29157 TCGGAGTGAGTTCTTTGGCTTGGACAGGACATTTAGTTCATGTCGCTATTCCAGGATCCA 29098 Query 185583 GAGGA-ATCACTGTAGATTGGACTAATTATGTGTTTATGAAACCTCATCCTGCAGGTTTA 185641 | ||| | || ||| |||| ||||| | | | | ||| ||||| ||| || Sbjct 29097 GGGGACAGTACGTCAGA-TGGAATAATTTTTTAGATGTATTACCCTATCCTCAAGGGTTG 29039 Query 185642 CTGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTGA-TGGATTAAATCA 185700 ||| | ||||| || | ||| | ||||||| ||||| ||||| | || | | || Sbjct 29038 GGACCACTTTTTACGGGTCAGTGGAATCTTTATGCCCAAAACCCTGATTCGAGT-AGCCA 28980 Query 185701 AATATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACATTCATGGGTGGTTTCCA 185760 |||| ||| | | || | ||||| || || |||| | | ||||| || || Sbjct 28979 TTTATTTGGTACTTCCCAAGGAACAGGAACTGCCATTCTAACCCTTCTCGGTGGATTTCA 28920 Query 185761 TCCACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGCAATAGGAGT 185820 ||||||||| | |||||| |||| ||||| || |||||||| | || || | | | Sbjct 28919 TCCACAAACGCAAAGTTTATGGCTGACCGATATTGCTCATCATCATTTAGCTATTGCATT 28860 Query 185821 AATATTCATTATTGCAGGTCATATGTATAGAAGT-GCTTGGGGTATTGGTCACTCAATGA 185879 || ||| | || || |||||||||||||||| | ||| ||| ||||| ||| || | Sbjct 28859 TATTTTCCTGATCGCTGGTCATATGTATAGAACTAACTTCGGG-ATTGGGCACAGTATCA 28801 Query 185880 AGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGCAGGTCATAAAGGAT 185939 | || | | ||| |||||| || ||| | || || |||| || ||||| || Sbjct 28800 AAGATCTTTTAGAAACACATATTCCTCCAGGGGGTCGATTAGGGCGTGGGCATAAGGGTC 28741 Query 185940 TATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCATCTCTAG 185999 | ||||| ||| | | | || | || | || ||||||||||| || || ||| ||| Sbjct 28740 TTTATGACACAATCAATAATTCGCTTCATTTTCAATTAGGTCTTGCTCTAGCCTCTTTAG 28681 Query 186000 GTGTTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCATCCTATGCTTTCATAG 186059 | ||| ||||| | || || ||||| |||||||| | || | ||||| ||||||| Sbjct 28680 GGGTTATTACTTCCTTAGTAGCTCAACACATGTACTCTTTACCTGCTTATGCATTCATAG 28621 Query 186060 CACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAATACATTGCA 186112 |||| | |||||| |||||||| ||||| |||||| |||||||| ||| Sbjct 28620 CACAAGACTTTACTACTCAAGCTGCGTTATATACTCATCACCAATACATCGCA 28568 >seq2660 Length=2080 Score = 154 bits (170), Expect = 2e-32 Identities = 205/285 (72%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696 |||| | || |||| ||| ||||||| |||| ||| | ||||| | | || | Sbjct 288 ACCTATAACTATTCAATATGCTTATGAGAAATCAATTACGTCAGAACGTCTCGGTGGTCG 229 Query 188697 GATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTAT 188756 || |||| ||| |||||||||||||||||||| ||||||||||| | || || || || Sbjct 228 AATTCACTTTGAATTTGATAAATGTATTGCTTGCGAAGTATGTGTTCGTGTATGCCCAAT 169 Query 188757 TAATTTACCTGTAGTTGATTGGGTAATGAATAAACAAACTAAGAAGAAGGAACTTAGAAA 188816 || ||||||| ||||||||| | || | | | | | || ||||| || | || Sbjct 168 AGATCTACCTGTTGTTGATTGGAGATTGGAAAGAGATATGAAAAAGAAACAATTGCTTAA 109 Query 188817 TTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCCAAC 188876 |||| ||||| || || | || || || ||||| || ||||| || || |||||||| Sbjct 108 TTATAGTATTGATTTCGGGGTCTGTATATTTTGTGGTAACTGTGTCGAGTATTGTCCAAC 49 Query 188877 TAACTGTCTATCCATGACAGAAGAGTATGAACTATCTGTTTTTGA 188921 |||||| |||| ||||| ||||| ||||| || ||| || ||| Sbjct 48 AAACTGTTTATCAATGACTGAAGAATATGAGCTTTCTACTTATGA 4 >seq2678 Length=2076 Score = 132 bits (146), Expect = 6e-26 Identities = 185/254 (73%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696 |||||| || |||| ||||||||||| |||| ||| | ||||| | | | || || Sbjct 280 ACCTGTAACTATTCAATATCCTTATGAGAAATCAATTACGTCAGAACGTT-TCGATGGTC 222 Query 188697 GA-TACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTA 188755 || | |||| ||| |||||||||||||||||||| ||||||||||| | || || |||| Sbjct 221 GAATTCACTTTGAATTTGATAAATGTATTGCTTGCGAAGTATGTGTTCGTGTATG-CCTA 163 Query 188756 TTA-ATTTACCTGTAGTTGATTGGGTAATGAATAAACAAACTAAGAAGAAGGAACTTAGA 188814 || || || || | ||||||||| | || | | | | | || ||||| || | Sbjct 162 ATAGATCTATCTATTGTTGATTGGAGATTGGAAAGAGATATGAAAAAGAAACAATTGCTT 103 Query 188815 AATTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCCA 188874 |||||| ||||| || || | || || || ||||| || ||||| || || |||||| Sbjct 102 AATTATAGTATTGATTTCGGGGTCTGTATATTTTGTGGTAACTGTGTCGAGTATTGTCCA 43 Query 188875 ACTAACTGTCTATC 188888 || |||||| |||| Sbjct 42 ACAAACTGTTTATC 29 >seq10 Length=33665772 Score = 132 bits (146), Expect = 6e-26 Identities = 229/330 (69%), Gaps = 21/330 (6%) Strand=Plus/Plus Query 190124 GATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAA 190183 ||||||||||||||||| || || ||||| |||||||||||| |||||||||| |||||| Sbjct 4332895 GATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCAGAA 4332954 Query 190184 CATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAG--CAGGTATGTTTGGTGGAG 190241 || || ||||||||||| | ||| || ||| |||||||| | ||| | || | | Sbjct 4332955 CACAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTCTGGTGTATTCG-----G 4333009 Query 190242 CATTATTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTG 190301 | || | | ||||||||||| | || | |||| | | ||||| |||| |||| Sbjct 4333010 CCCTA----GTACTATGCATGGTTCCTTGGTCAACTCTTGTTTCATCAGGGAAATCACTG 4333065 Query 190302 GTTTAGAGTCACAG--AACTATGGTTACAAGTTTGGACAAGAAGAAGAAAC------ATA 190353 || || | | | | || || || || |||| ||||| || ||| Sbjct 4333066 AAAACGAATCCGCGTTAGCAA--GTGACTGATTCGGTAAAGAGGAAGAGACTTTACAATA 4333123 Query 190354 CAACATAGTAGCTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAA 190413 | ||| |||| |||||||||||| || | || | | || ||| |||||| ||||| Sbjct 4333124 GAGCATTGTAGTTGCTCATGGTTATTTAAGCCGATTGAACTGCCAATATGCTAGTTTCAA 4333183 Query 190414 CAACTCAAGAAGTTTACACTTCTTCTTAGC 190443 |||||| | || ||| |||||||| || Sbjct 4333184 CAACTCGACTTCTTGACATTTCTTCTTGGC 4333213 >seq9 Length=34148863 Score = 129 bits (142), Expect = 7e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 190025 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 190084 || |||||| | |||||||| |||||| |||||||| || || | || || ||| Sbjct 1506950 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 1507009 Query 190085 GTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCCTTTAGGTATC 190144 || ||| | | ||||| ||||||| || ||||||||||||||||||||||| || Sbjct 1507010 GTTTTCTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATA 1507069 Query 190145 TCAGGTACATTCAACTTCATGT-TTGTATTCCAAGCAGAACATAATATCCTTATGCACCC 190203 || | | ||||||||||||| ||||||| | |||||||| || ||||||||||| | Sbjct 1507070 TCTAGCA-TTTCAACTTCATGTATTGTATTTCTGGCAGAACACAACATCCTTATGCATCT 1507128 Query 190204 ATTCCATATGGCAGGTGTAGCAGGT 190228 | || ||| ||||||| | ||| Sbjct 1507129 GGTTCACATGTTAGGTGTAACTGGT 1507153 >seq1063 Length=431445 Score = 127 bits (140), Expect = 3e-24 Identities = 230/331 (69%), Gaps = 23/331 (7%) Strand=Plus/Minus Query 190124 GATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAA 190183 |||||||||||||| || || || ||||| ||| |||||||| ||||||| | |||||| Sbjct 54225 GATGGTATGCCTTTTGGAATATCTGGTACTTTCTACTTCATGATTGTATTACTGGCAGAA 54166 Query 190184 CATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAG--CAGGTATGTTTGGTGGAG 190241 || || ||||||||||| | ||| || ||| |||||||| | ||| | || | | Sbjct 54165 CACAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTCTGGTGTATTCG-----G 54111 Query 190242 CATTATTCTCTGCAATGCATGGTTCACTTGTAACA-TCTTCTCTAATCAGAGAAACAACT 190300 | || | | ||||||||||| |||| || |||| | | ||||| |||| ||| Sbjct 54110 CCCTA----GTACTATGCATGGTTC-CTTGGTCCACTCTTGTTTCATCAGGGAAATCACT 54056 Query 190301 GGTTTAGAGTCACAG--AACTATGGTTACAAGTTTGGACAAGAAGAAGAAAC------AT 190352 | || || | | | | || || || || |||| ||||| || || Sbjct 54055 GAAAACGAATCCGCGTTAGCAA--GTGACTGATTCGGTAAAGAGGAAGAGACTTTACAAT 53998 Query 190353 ACAACATAGTAGCTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCA 190412 | | || ||||||||||||||||| || | || | |||||||| |||||| |||| Sbjct 53997 AGAGTATTGTAGCTGCTCATGGTTATTTAAGCCGATTGATCTTCCAATATGCTAGTTTCA 53938 Query 190413 ACAACTCAAGAAGTTTACACTTCTTCTTAGC 190443 ||||||| | |||||| |||||||| || Sbjct 53937 ACAACTCTCGTTCTTTACATTTCTTCTTGGC 53907 >seq7 Length=28617404 Score = 107 bits (118), Expect = 2e-18 Identities = 202/294 (69%), Gaps = 10/294 (3%) Strand=Plus/Minus Query 185752 TGGTTTCCATCCACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGC 185811 ||| || |||||||||||| | |||||| |||| ||||| || |||| ||| |||| Sbjct 25098584 TGGATTTCATCCACAAACACAAAGTTTATGGCTGACCGATATTGCTCATCCTCATTTTGC 25098525 Query 185812 AATAGGAGTAATATTCATTATTGCAGGTCATATGTATAGAAGT-GCTTGGGGTATTGGTC 185870 || | | | || ||| ||||||| |||||||||||||||| | ||| || ||||| | Sbjct 25098524 TATTGCATTTATTTTCCTTATTGCTGGTCATATGTATAGAACTAACTTCAGG-ATTGGGC 25098466 Query 185871 A------CTCAATG--AAGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGG 185922 | | || || || || || | || |||||| || ||||| || || |||| Sbjct 25098465 ACACTGGCACAGTGTCAAAGATATTTTAAAAACACATATTCCTCCAAGGGGGCGATTAGG 25098406 Query 185923 TGCAGGTCATAAAGGATTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCT 185982 | ||||| | | ||||||||| | | | ||| | || | || |||||||| Sbjct 25098405 ATGTGAGCATAAGCGTCTTTATGAAACAATCAATAATTCACTTCATTTTCAATTAGGTCT 25098346 Query 185983 TGCACTTGCATCTCTAGGTGTTGTTACTAGTCTGGTGGCACAACATATGTACTC 186036 ||| | || ||| |||| ||| ||||| |||| || |||| ||||| || Sbjct 25098345 TGCTTTAGCCTCTTTAGGGGTTATTACTTCCTTGGTAGCTCAACGCATGTATTC 25098292 >seq1382 Length=172696 Score = 105 bits (116), Expect = 8e-18 Identities = 235/347 (68%), Gaps = 18/347 (5%) Strand=Plus/Plus Query 190182 AACATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCA--GGTATGTTTGGTGG 190239 |||| || ||||||||||| ||||| | ||| |||| |||| ||| | || || || Sbjct 123495 AACACAACATCCTTATGCATCCATTGAACATGTTAGGTCTAGCTCTGGTGTATTCGGCGG 123554 Query 190240 AGCATTATTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAAC 190299 | ||||| ||| ||||||||||| | ||||| ||| | | ||||| ||||| || Sbjct 123555 CTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCAC 123614 Query 190300 TGGTTTAGAGTCA-CAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACA----TAC 190354 || || || || | | ||||||| || || |||||||||| || | ||| Sbjct 123615 TGAAAACGAATCTGCATTAGCA-GGTTACAGATTCGGTCAAGAAGAAGGAAGAGACTTAC 123673 Query 190355 AACATAGTA-----GCTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCAT 190409 || | |||| |||||||||||||| || | || | ||| |||| |||||| | Sbjct 123674 AATAGAGTATTGTAGCTGCTCATGGTTATTTAAGCCGATTGATCCTCCAATATGCTAGTT 123733 Query 190410 TCAACAACT----CAAGAAGTTTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTA 190465 ||||||||| | | || ||| ||||| |||| | || || | || | Sbjct 123734 TCAACAACTCTCGCTACTTCTTGACATGGATTCTTGGCAGCTTGGCCAGTTATTGGTATC 123793 Query 190466 TGGTTAACATCAATGGGTATTTGCACAATGGCATTCAA-CTTAAATG 190511 ||| | ||| | | |||||| |||| ||||| ||||| || ||||| Sbjct 123794 TGGGTCACAGCTTTAGGTATTAGCACCATGGCTTTCAACCTCAAATG 123840 >seq1042 Length=564079 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 182532 AATGTGTGAAGGCTTGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAG 182591 ||||||| ||||| || ||||||| |||||| | |||||||| || || |||| Sbjct 136950 AATGTGTACGAGCTTGCCCTACAGATGTATAGGAAATGATACCTTGGGACGGATGTAAAG 137009 Query 182592 CAAAGCAAATTGCTTCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAA 182651 | |||||||| ||||| ||||| ||||| ||||| || | || ||| ||||||||||| Sbjct 137010 CTAAGCAAATAGCTTCTTCACCAAGAACCGAGGACAGTATGGGTTGTCAGAGATGTGAAT 137069 Query 182652 CAGCATGTCCTACA 182665 | || || || ||| Sbjct 137070 CTGCCTGCCCAACA 137083 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 190121 TCTGATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCA 190180 || |||||||||||| || ||||| ||||| ||| |||||||| |||||||||| || Sbjct 550845 TCAGATGGTATGCCTCACGGAATCTCTGGTACTTTCCACTTCATGATTGTATTCCAGGCT 550786 Query 190181 GAACATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGG 190227 || || || ||||||||||||||||| | ||| |||| | || || Sbjct 550785 GAGCACAACATCCTTATGCACCCATTTAACATGTTAGGTTTTGCTGG 550739 >seq1024 Length=717246 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 190562 ACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAAAGAAAT 190621 || |||| ||| | | ||| | || ||||||||||||||||||||||||||| | ||| Sbjct 156791 ACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAAT 156850 Query 190622 GCACACAACTTCCCACTAGACCTA 190645 || ||||||||||| ||||||||| Sbjct 156851 GCTCACAACTTCCCTCTAGACCTA 156874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631369905874440