Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_028955.1
Length=197361
Score E
Sequences producing significant alignments: (Bits) Value
seq3338 637 6e-178
seq2660 154 2e-32
seq2678 132 6e-26
seq10 132 6e-26
seq9 129 7e-25
seq1063 127 3e-24
seq7 107 2e-18
seq1382 105 8e-18
seq1042 98.7 1e-15
seq1024 89.7 6e-13
>seq3338
Length=30856
Score = 637 bits (706), Expect = 6e-178
Identities = 1514/2273 (67%), Gaps = 111/2273 (5%)
Strand=Plus/Minus
Query 183935 TTATTCACCCATCATATGTGGATAGGTGGTTTTCTTATTGTGGGTGCATCAGCACATGCT 183994
|| ||||| ||||| |||||||| ||||| ||||| || || ||||| | ||||||||
Sbjct 30824 TTGTTCACACATCACATGTGGATCGGTGGGTTTCTCATAGTTGGTGCTGCTGCACATGCA 30765
Query 183995 TCAATTGCTATGATAAGAGACTATAATCC---TGTTCAACATATGGGAAATGTATTAGAT 184051
||||| |||| ||||||| || |||| | || | | | | || ||||||||
Sbjct 30764 GCAATTTTTATGGTAAGAGATTACGATCCAACTACTCGATACAACG---ATCTATTAGAT 30708
Query 184052 AGAATACTTAAATCTAGAGATGCAATCATCAGTCACTTGAACTGGGTATGCATCTTTTTA 184111
| | |||| | | ||||||||||| || | ||||||| ||| || ||| |
Sbjct 30707 CGTGTCCTTAGACACCGCGATGCAATCATATCACATCTTAACTGGGCATGTATATTTCTG 30648
Query 184112 GGTTTTCATAGTTTTGGTCTTTATATTCACAATGATATTATGAGAGCATTGGGTAGACCT 184171
|||||||| |||||||| | |||||||| ||||||| ||||| || || || | ||
Sbjct 30647 GGTTTTCACAGTTTTGGCTTGTATATTCATAATGATACCATGAGCGCTTTAGGGCGTCCA 30588
Query 184172 AATGATCTATTCAGTGATACAGCAATACAATTACAACCTGTATTTGCACAGTCTGTTCAG 184231
| ||| | || ||||| || |||||||||||||| | ||||| || | || ||
Sbjct 30587 CAAGATATGTTTTCAGATACCGCTATACAATTACAACCCATCTTTGCTCAATGGGTACAA 30528
Query 184232 AGATTACATGCTTCATTAT-----ATAATGTCTC-TGATGTATTTGGTGGATCAACCACA 184285
| ||||||| | | |||| ||| || || | | | | | | |
Sbjct 30527 AACACCCATGCTTTAGCACCCGGCATAACAGCTCCTGGTGCAACAGCAAGTACCAGCTTA 30468
Query 184286 AT---GGTTGGTGGTAAGATTG-------------CTAAT--GCT------CCTTTTGTA 184321
| || |||||| || | | | || ||| ||| || |
Sbjct 30467 ACTTGGGGAGGTGGTGAGTTGGTAGCAGTAGGCGGCAAAGTAGCTTTGTTACCTATTCCA 30408
Query 184322 CTAGGTACAGCAGACTTTATGATACATCACATACACGCTTTCCAGATTCATGTTTGTGTA 184381
|||| || |||||||| | | ||||| || || || || ||| || || ||||
Sbjct 30407 TTAGGAACCGCAGACTTCTTAGTCCATCATATTCATGCATTTACGATCCACGTGACTGTA 30348
Query 184382 TTAATTCTTCTCAAGGGTGTTTTATACTCTAGAAACTCACAATTAATACCAGATAAGAGT 184441
|| || || || || |||||| ||| || | | || | || ||||| ||||| ||
Sbjct 30347 TTGATACTACTGAAAGGTGTTCTATTTGCTCGCAGTTCCCGTTTGATACCTGATAA-AGC 30289
Query 184442 AAGT-TAGGATTCAGATTCCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATC 184500
|| | | || || | || ||||||||||| ||||| ||||| || || ||||| |||||
Sbjct 30288 AAATCTTGGTTTTCGTTTTCCTTGTGATGGACCTGGAAGAGGGGGGACATGTCAAGTATC 30229
Query 184501 AGGATGGGATCATGTATTCCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAAT 184560
| ||||||||||| ||| | ||| ||||||||||||| ||| || || |||| ||
Sbjct 30228 TGCCTGGGATCATGTCTTCTTAGGTCTATTCTGGATGTACAATGCGATTTCCGTAGTTAT 30169
Query 184561 CTTCCACTTTAGTTGGAGAATGCAA---GATGTATGGGGT-CTAT--------------- 184601
||||| || ||||||| |||||| ||||| |||||| ||||
Sbjct 30168 TTTCCATTTCAGTTGGAAAATGCAGTCGGATGTTTGGGGTACTATAAGTGATCAAGGGGT 30109
Query 184602 --------------CAGGAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTT 184647
||||||| |||||||| |||||||| ||||| || ||||| ||| |
Sbjct 30108 AGTAACTCATATTACAGGAGGAAACTTTGCGCAGAGTTCCATTACTATTAATGGGTGGCT 30049
Query 184648 GAGAGACTTCTTATGGTCACAGTCAAGTCAAGTTCTCAATAGTTATGGA-CAAGAC-ATC 184705
|||| ||||||||| ||||| || ||| || | | |||||| | | |||
Sbjct 30048 TCGAGATTTCTTATGGGCACAGGCATCTCAGGTAATTCAGTCTTATGGTTCTTCATTATC 29989
Query 184706 AGCATGTATGGTTTGCTATTTCTT-GGAGCACATTTTGTATGGGCATTCAGTTTGATGTT 184764
|||| ||||| | || |||||| || || |||||||| ||||| |||||||| |||||
Sbjct 29988 TGCAT--ATGGTCT-CTTTTTCTTAGGTGCTCATTTTGTCTGGGCTTTCAGTTTAATGTT 29932
Query 184765 CCTATGGAGTGGTAGAGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAA 184824
|||| ||||| | || || |||||||| | || || || || | |||||| |||||
Sbjct 29931 TCTATTCAGTGGCCGTGGTTATTGGCAAGAACTCATTGAATCCATCGTTTGGGCTCATAA 29872
Query 184825 CAAATTAAAACTTGCACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGC 184884
|||||||||| |||| ||| | | ||| || ||||| || ||| ||||||||||||
Sbjct 29871 CAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTACAAGGACGTGC 29812
Query 184885 TGTTGGAGTTGCACACTTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGC 184944
||| ||||| | || | | | || || || |||||||||||||||||||||||||| ||
Sbjct 29811 TGTAGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCATTCTTCTTAGC 29752
Query 184945 TCACCTTATCCCCTTAAGTTAAATCATGGCTA-------CTAAAA-------------CA 184984
|||| | ||| || ||||||| | ||| |
Sbjct 29751 AAGAATTAT----TGCAGTAGGATAATGGCTAGGAGGATTTGAAAGGCATTATGGCATTA 29696
Query 184985 AAATTTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTGGTAT 185044
| |||||| | |||| |||| || || || || || ||| | | | |||| |
Sbjct 29695 AGATTTCCGAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTT 29636
Query 185045 GGATTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGT-TATA 185103
|| | || || ||||||||||| ||||||||||| |||| || || || | || | ||
Sbjct 29635 GGTATTGCTACCGCACATGACTTCGAGAGTCATGATGATATTACTGAGGA-ACGTCTTTA 29577
Query 185104 TCAAAAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGG 185163
||| || | |||||| | |||||||| || | ||||| |||||||| ||| | ||
Sbjct 29576 TCAGAACATTTTTGCTTCTCACTTTGGGCAATTAGCAATAATCTTTCTGTGGACGTCCGG 29517
Query 185164 TAATTTAATTCATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACAACA 185223
||| | ||||| |||| |||||||| || ||||| | || |||||| |||
Sbjct 29516 AAATCTCTTTCATGTAGCTTGGCAAGGAAATTTTGAGTCATGGATACAAGACCCTTTACA 29457
Query 185224 TGTGATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGATGC 185283
||| | |||||| || ||| ||| ||||||||||||||||||||| || ||| ||
Sbjct 29456 TGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCAGCTGTAGAAGC 29397
Query 185284 ATACACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCATTG 185343
| || | | |||| |||| ||| ||||| | ||||| || | ||||| ||
Sbjct 29396 CTTTACTCGAGGAGGTGCTACCGGTCCAGTGAATATCGCTTATTCCGGCGTTTATCAGTG 29337
Query 185344 GTGGTACACAGTTGGTATGAGAACTAATATGCAACTGTATACTGGTGGTGCATTTATGAT 185403
|||||| ||| | || | | |||||| | || |||||||| | | ||| | |
Sbjct 29336 GTGGTATACAATCGGATTACGCACTAATGAAGATCTTTATACTGGAGCTCTTTTTCTATT 29277
Query 185404 TCTACTAGCATTGGTATCTTTACTTGGTGCTCAATTACATCTGAAACCAAAGTTTGCACC 185463
| || | |||| ||| | | | | ||||| | ||||||| | | | |
Sbjct 29276 ATTTCTTTCTGCTATATCCTTAATAGCGGGTTGGTTACACTTACAACCAAA-ATGGAAAC 29218
Query 185464 TAAGC-TTGCTTGGTTTAAAGATAATGAGAACAGATTAAATCATCATCTATCAGTTCTAT 185522
|||| || | ||||| ||| || || | ||||||||||| | |||| || |
Sbjct 29217 CAAGCGTTTCGTGGTTCAAAAATGCCGAATCTCGTCTAAATCATCATTTGTCAGGACTTT 29158
Query 185523 TTGGATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGCATCAA 185582
| ||| | |||||| | || ||| | || ||||| | || || || || || | ||| |
Sbjct 29157 TCGGAGTGAGTTCTTTGGCTTGGACAGGACATTTAGTTCATGTCGCTATTCCAGGATCCA 29098
Query 185583 GAGGA-ATCACTGTAGATTGGACTAATTATGTGTTTATGAAACCTCATCCTGCAGGTTTA 185641
| ||| | || ||| |||| ||||| | | | | ||| ||||| ||| ||
Sbjct 29097 GGGGACAGTACGTCAGA-TGGAATAATTTTTTAGATGTATTACCCTATCCTCAAGGGTTG 29039
Query 185642 CTGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTGA-TGGATTAAATCA 185700
||| | ||||| || | ||| | ||||||| ||||| ||||| | || | | ||
Sbjct 29038 GGACCACTTTTTACGGGTCAGTGGAATCTTTATGCCCAAAACCCTGATTCGAGT-AGCCA 28980
Query 185701 AATATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACATTCATGGGTGGTTTCCA 185760
|||| ||| | | || | ||||| || || |||| | | ||||| || ||
Sbjct 28979 TTTATTTGGTACTTCCCAAGGAACAGGAACTGCCATTCTAACCCTTCTCGGTGGATTTCA 28920
Query 185761 TCCACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGCAATAGGAGT 185820
||||||||| | |||||| |||| ||||| || |||||||| | || || | | |
Sbjct 28919 TCCACAAACGCAAAGTTTATGGCTGACCGATATTGCTCATCATCATTTAGCTATTGCATT 28860
Query 185821 AATATTCATTATTGCAGGTCATATGTATAGAAGT-GCTTGGGGTATTGGTCACTCAATGA 185879
|| ||| | || || |||||||||||||||| | ||| ||| ||||| ||| || |
Sbjct 28859 TATTTTCCTGATCGCTGGTCATATGTATAGAACTAACTTCGGG-ATTGGGCACAGTATCA 28801
Query 185880 AGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGCAGGTCATAAAGGAT 185939
| || | | ||| |||||| || ||| | || || |||| || ||||| ||
Sbjct 28800 AAGATCTTTTAGAAACACATATTCCTCCAGGGGGTCGATTAGGGCGTGGGCATAAGGGTC 28741
Query 185940 TATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCATCTCTAG 185999
| ||||| ||| | | | || | || | || ||||||||||| || || ||| |||
Sbjct 28740 TTTATGACACAATCAATAATTCGCTTCATTTTCAATTAGGTCTTGCTCTAGCCTCTTTAG 28681
Query 186000 GTGTTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCATCCTATGCTTTCATAG 186059
| ||| ||||| | || || ||||| |||||||| | || | ||||| |||||||
Sbjct 28680 GGGTTATTACTTCCTTAGTAGCTCAACACATGTACTCTTTACCTGCTTATGCATTCATAG 28621
Query 186060 CACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAATACATTGCA 186112
|||| | |||||| |||||||| ||||| |||||| |||||||| |||
Sbjct 28620 CACAAGACTTTACTACTCAAGCTGCGTTATATACTCATCACCAATACATCGCA 28568
>seq2660
Length=2080
Score = 154 bits (170), Expect = 2e-32
Identities = 205/285 (72%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696
|||| | || |||| ||| ||||||| |||| ||| | ||||| | | || |
Sbjct 288 ACCTATAACTATTCAATATGCTTATGAGAAATCAATTACGTCAGAACGTCTCGGTGGTCG 229
Query 188697 GATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTAT 188756
|| |||| ||| |||||||||||||||||||| ||||||||||| | || || || ||
Sbjct 228 AATTCACTTTGAATTTGATAAATGTATTGCTTGCGAAGTATGTGTTCGTGTATGCCCAAT 169
Query 188757 TAATTTACCTGTAGTTGATTGGGTAATGAATAAACAAACTAAGAAGAAGGAACTTAGAAA 188816
|| ||||||| ||||||||| | || | | | | | || ||||| || | ||
Sbjct 168 AGATCTACCTGTTGTTGATTGGAGATTGGAAAGAGATATGAAAAAGAAACAATTGCTTAA 109
Query 188817 TTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCCAAC 188876
|||| ||||| || || | || || || ||||| || ||||| || || ||||||||
Sbjct 108 TTATAGTATTGATTTCGGGGTCTGTATATTTTGTGGTAACTGTGTCGAGTATTGTCCAAC 49
Query 188877 TAACTGTCTATCCATGACAGAAGAGTATGAACTATCTGTTTTTGA 188921
|||||| |||| ||||| ||||| ||||| || ||| || |||
Sbjct 48 AAACTGTTTATCAATGACTGAAGAATATGAGCTTTCTACTTATGA 4
>seq2678
Length=2076
Score = 132 bits (146), Expect = 6e-26
Identities = 185/254 (73%), Gaps = 4/254 (2%)
Strand=Plus/Minus
Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696
|||||| || |||| ||||||||||| |||| ||| | ||||| | | | || ||
Sbjct 280 ACCTGTAACTATTCAATATCCTTATGAGAAATCAATTACGTCAGAACGTT-TCGATGGTC 222
Query 188697 GA-TACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTA 188755
|| | |||| ||| |||||||||||||||||||| ||||||||||| | || || ||||
Sbjct 221 GAATTCACTTTGAATTTGATAAATGTATTGCTTGCGAAGTATGTGTTCGTGTATG-CCTA 163
Query 188756 TTA-ATTTACCTGTAGTTGATTGGGTAATGAATAAACAAACTAAGAAGAAGGAACTTAGA 188814
|| || || || | ||||||||| | || | | | | | || ||||| || |
Sbjct 162 ATAGATCTATCTATTGTTGATTGGAGATTGGAAAGAGATATGAAAAAGAAACAATTGCTT 103
Query 188815 AATTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCCA 188874
|||||| ||||| || || | || || || ||||| || ||||| || || ||||||
Sbjct 102 AATTATAGTATTGATTTCGGGGTCTGTATATTTTGTGGTAACTGTGTCGAGTATTGTCCA 43
Query 188875 ACTAACTGTCTATC 188888
|| |||||| ||||
Sbjct 42 ACAAACTGTTTATC 29
>seq10
Length=33665772
Score = 132 bits (146), Expect = 6e-26
Identities = 229/330 (69%), Gaps = 21/330 (6%)
Strand=Plus/Plus
Query 190124 GATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAA 190183
||||||||||||||||| || || ||||| |||||||||||| |||||||||| ||||||
Sbjct 4332895 GATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCAGAA 4332954
Query 190184 CATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAG--CAGGTATGTTTGGTGGAG 190241
|| || ||||||||||| | ||| || ||| |||||||| | ||| | || | |
Sbjct 4332955 CACAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTCTGGTGTATTCG-----G 4333009
Query 190242 CATTATTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTG 190301
| || | | ||||||||||| | || | |||| | | ||||| |||| ||||
Sbjct 4333010 CCCTA----GTACTATGCATGGTTCCTTGGTCAACTCTTGTTTCATCAGGGAAATCACTG 4333065
Query 190302 GTTTAGAGTCACAG--AACTATGGTTACAAGTTTGGACAAGAAGAAGAAAC------ATA 190353
|| || | | | | || || || || |||| ||||| || |||
Sbjct 4333066 AAAACGAATCCGCGTTAGCAA--GTGACTGATTCGGTAAAGAGGAAGAGACTTTACAATA 4333123
Query 190354 CAACATAGTAGCTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAA 190413
| ||| |||| |||||||||||| || | || | | || ||| |||||| |||||
Sbjct 4333124 GAGCATTGTAGTTGCTCATGGTTATTTAAGCCGATTGAACTGCCAATATGCTAGTTTCAA 4333183
Query 190414 CAACTCAAGAAGTTTACACTTCTTCTTAGC 190443
|||||| | || ||| |||||||| ||
Sbjct 4333184 CAACTCGACTTCTTGACATTTCTTCTTGGC 4333213
>seq9
Length=34148863
Score = 129 bits (142), Expect = 7e-25
Identities = 153/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 190025 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 190084
|| |||||| | |||||||| |||||| |||||||| || || | || || |||
Sbjct 1506950 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 1507009
Query 190085 GTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCCTTTAGGTATC 190144
|| ||| | | ||||| ||||||| || ||||||||||||||||||||||| ||
Sbjct 1507010 GTTTTCTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATA 1507069
Query 190145 TCAGGTACATTCAACTTCATGT-TTGTATTCCAAGCAGAACATAATATCCTTATGCACCC 190203
|| | | ||||||||||||| ||||||| | |||||||| || ||||||||||| |
Sbjct 1507070 TCTAGCA-TTTCAACTTCATGTATTGTATTTCTGGCAGAACACAACATCCTTATGCATCT 1507128
Query 190204 ATTCCATATGGCAGGTGTAGCAGGT 190228
| || ||| ||||||| | |||
Sbjct 1507129 GGTTCACATGTTAGGTGTAACTGGT 1507153
>seq1063
Length=431445
Score = 127 bits (140), Expect = 3e-24
Identities = 230/331 (69%), Gaps = 23/331 (7%)
Strand=Plus/Minus
Query 190124 GATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAA 190183
|||||||||||||| || || || ||||| ||| |||||||| ||||||| | ||||||
Sbjct 54225 GATGGTATGCCTTTTGGAATATCTGGTACTTTCTACTTCATGATTGTATTACTGGCAGAA 54166
Query 190184 CATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAG--CAGGTATGTTTGGTGGAG 190241
|| || ||||||||||| | ||| || ||| |||||||| | ||| | || | |
Sbjct 54165 CACAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTCTGGTGTATTCG-----G 54111
Query 190242 CATTATTCTCTGCAATGCATGGTTCACTTGTAACA-TCTTCTCTAATCAGAGAAACAACT 190300
| || | | ||||||||||| |||| || |||| | | ||||| |||| |||
Sbjct 54110 CCCTA----GTACTATGCATGGTTC-CTTGGTCCACTCTTGTTTCATCAGGGAAATCACT 54056
Query 190301 GGTTTAGAGTCACAG--AACTATGGTTACAAGTTTGGACAAGAAGAAGAAAC------AT 190352
| || || | | | | || || || || |||| ||||| || ||
Sbjct 54055 GAAAACGAATCCGCGTTAGCAA--GTGACTGATTCGGTAAAGAGGAAGAGACTTTACAAT 53998
Query 190353 ACAACATAGTAGCTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCA 190412
| | || ||||||||||||||||| || | || | |||||||| |||||| ||||
Sbjct 53997 AGAGTATTGTAGCTGCTCATGGTTATTTAAGCCGATTGATCTTCCAATATGCTAGTTTCA 53938
Query 190413 ACAACTCAAGAAGTTTACACTTCTTCTTAGC 190443
||||||| | |||||| |||||||| ||
Sbjct 53937 ACAACTCTCGTTCTTTACATTTCTTCTTGGC 53907
>seq7
Length=28617404
Score = 107 bits (118), Expect = 2e-18
Identities = 202/294 (69%), Gaps = 10/294 (3%)
Strand=Plus/Minus
Query 185752 TGGTTTCCATCCACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGC 185811
||| || |||||||||||| | |||||| |||| ||||| || |||| ||| ||||
Sbjct 25098584 TGGATTTCATCCACAAACACAAAGTTTATGGCTGACCGATATTGCTCATCCTCATTTTGC 25098525
Query 185812 AATAGGAGTAATATTCATTATTGCAGGTCATATGTATAGAAGT-GCTTGGGGTATTGGTC 185870
|| | | | || ||| ||||||| |||||||||||||||| | ||| || ||||| |
Sbjct 25098524 TATTGCATTTATTTTCCTTATTGCTGGTCATATGTATAGAACTAACTTCAGG-ATTGGGC 25098466
Query 185871 A------CTCAATG--AAGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGG 185922
| | || || || || || | || |||||| || ||||| || || ||||
Sbjct 25098465 ACACTGGCACAGTGTCAAAGATATTTTAAAAACACATATTCCTCCAAGGGGGCGATTAGG 25098406
Query 185923 TGCAGGTCATAAAGGATTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCT 185982
| ||||| | | ||||||||| | | | ||| | || | || ||||||||
Sbjct 25098405 ATGTGAGCATAAGCGTCTTTATGAAACAATCAATAATTCACTTCATTTTCAATTAGGTCT 25098346
Query 185983 TGCACTTGCATCTCTAGGTGTTGTTACTAGTCTGGTGGCACAACATATGTACTC 186036
||| | || ||| |||| ||| ||||| |||| || |||| ||||| ||
Sbjct 25098345 TGCTTTAGCCTCTTTAGGGGTTATTACTTCCTTGGTAGCTCAACGCATGTATTC 25098292
>seq1382
Length=172696
Score = 105 bits (116), Expect = 8e-18
Identities = 235/347 (68%), Gaps = 18/347 (5%)
Strand=Plus/Plus
Query 190182 AACATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCA--GGTATGTTTGGTGG 190239
|||| || ||||||||||| ||||| | ||| |||| |||| ||| | || || ||
Sbjct 123495 AACACAACATCCTTATGCATCCATTGAACATGTTAGGTCTAGCTCTGGTGTATTCGGCGG 123554
Query 190240 AGCATTATTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAAC 190299
| ||||| ||| ||||||||||| | ||||| ||| | | ||||| ||||| ||
Sbjct 123555 CTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCAC 123614
Query 190300 TGGTTTAGAGTCA-CAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACA----TAC 190354
|| || || || | | ||||||| || || |||||||||| || | |||
Sbjct 123615 TGAAAACGAATCTGCATTAGCA-GGTTACAGATTCGGTCAAGAAGAAGGAAGAGACTTAC 123673
Query 190355 AACATAGTA-----GCTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCAT 190409
|| | |||| |||||||||||||| || | || | ||| |||| |||||| |
Sbjct 123674 AATAGAGTATTGTAGCTGCTCATGGTTATTTAAGCCGATTGATCCTCCAATATGCTAGTT 123733
Query 190410 TCAACAACT----CAAGAAGTTTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTA 190465
||||||||| | | || ||| ||||| |||| | || || | || |
Sbjct 123734 TCAACAACTCTCGCTACTTCTTGACATGGATTCTTGGCAGCTTGGCCAGTTATTGGTATC 123793
Query 190466 TGGTTAACATCAATGGGTATTTGCACAATGGCATTCAA-CTTAAATG 190511
||| | ||| | | |||||| |||| ||||| ||||| || |||||
Sbjct 123794 TGGGTCACAGCTTTAGGTATTAGCACCATGGCTTTCAACCTCAAATG 123840
>seq1042
Length=564079
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 182532 AATGTGTGAAGGCTTGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAG 182591
||||||| ||||| || ||||||| |||||| | |||||||| || || ||||
Sbjct 136950 AATGTGTACGAGCTTGCCCTACAGATGTATAGGAAATGATACCTTGGGACGGATGTAAAG 137009
Query 182592 CAAAGCAAATTGCTTCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAA 182651
| |||||||| ||||| ||||| ||||| ||||| || | || ||| |||||||||||
Sbjct 137010 CTAAGCAAATAGCTTCTTCACCAAGAACCGAGGACAGTATGGGTTGTCAGAGATGTGAAT 137069
Query 182652 CAGCATGTCCTACA 182665
| || || || |||
Sbjct 137070 CTGCCTGCCCAACA 137083
Score = 95.1 bits (104), Expect = 2e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 190121 TCTGATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCA 190180
|| |||||||||||| || ||||| ||||| ||| |||||||| |||||||||| ||
Sbjct 550845 TCAGATGGTATGCCTCACGGAATCTCTGGTACTTTCCACTTCATGATTGTATTCCAGGCT 550786
Query 190181 GAACATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGG 190227
|| || || ||||||||||||||||| | ||| |||| | || ||
Sbjct 550785 GAGCACAACATCCTTATGCACCCATTTAACATGTTAGGTTTTGCTGG 550739
>seq1024
Length=717246
Score = 89.7 bits (98), Expect = 6e-13
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 190562 ACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAAAGAAAT 190621
|| |||| ||| | | ||| | || ||||||||||||||||||||||||||| | |||
Sbjct 156791 ACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAAT 156850
Query 190622 GCACACAACTTCCCACTAGACCTA 190645
|| ||||||||||| |||||||||
Sbjct 156851 GCTCACAACTTCCCTCTAGACCTA 156874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 631369905874440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |