Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq8 84.2 2e-11
>seq8
Length=35439739
Score = 84.2 bits (92), Expect = 2e-11
Identities = 149/215 (69%), Gaps = 12/215 (6%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| || || ||||| ||||| |||||||| ||||| | || ||||| ||| |
Sbjct 4857997 ATGCAGATCTTCGTGAAGACTCTCACTGGGAAGACCATTACCTTGGAGGTCGAGAGCTCG 4858056
Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
||| ||||||| ||||| || || ||||| || || | ||| ||
Sbjct 4858057 GAC-----ACAATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGG 4858111
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGAT 27963
| |||||| || | || ||||| || ||||| | || |||| |||| |||| |||||
Sbjct 4858112 ACCAGCAAAGGCTCATCTTTGCAGGCAAACAGCTCGAAGACGGCCGCACTCTTG-CCGAT 4858170
Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998
||||||||||| || ||| ||| | ||| ||||
Sbjct 4858171 TACAACATCCAGAAGGAGTCCACGCTCCATCTGGT 4858205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355830917187093
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |