Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq8 158 3e-33
seq9 154 4e-32
seq3 154 4e-32
seq11 143 6e-29
seq6 143 6e-29
seq1 136 9e-27
seq1007 131 4e-25
seq5 120 7e-22
seq4576 114 3e-20
seq7 107 5e-18
seq2 107 5e-18
seq5789 96.9 8e-15
seq1382 96.9 8e-15
seq2973 95.1 3e-14
seq1035 89.7 1e-12
>seq8
Length=35439739
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| ||||| || || || | || || |||||||| || | || |||
Sbjct 1223246 AGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCCAAGGTGCGGCCGTCT 1223305
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || | || |||||||| || || || |||||||||
Sbjct 1223306 TCGAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTGTCT 1223365
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| |||| ||| || |||| ||||| |||
Sbjct 1223366 TGGATCTTGGCCTTAACATTGTCGATGGTGTCGGAGGATTCAACCTCTAGGGTGATGGTC 1223425
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||||| | ||| | |||||
Sbjct 1223426 TTGCCAGTGAGGGTTTTCACGAAGATCTGCAT 1223457
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| |||||||| || || || | |||||||||||||| || | || ||
Sbjct 1222075 AGCACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCGGCCAGGGTGCGACCGTCC 1222134
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| |||||||| | || ||||| || |||||||| ||||||||
Sbjct 1222135 TCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCC 1222194
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||||||| ||| || ||||| ||||| ||| | || || || | ||||| |||
Sbjct 1222195 TGGATCTTTGCCTTAACGTTGTCGATCGTGTCAGAGCTCTCAACCTCCAGGGTGATGGTC 1222254
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | || || | ||| | |||||
Sbjct 1222255 TTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 1222286
Score = 140 bits (154), Expect = 8e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| ||||| || || || | ||||| ||||| | |||| |||||
Sbjct 26900824 AGGACGAGGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCC 26900883
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || || || ||||| || || ||||||||
Sbjct 26900884 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCC 26900943
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| |||||| || || ||||| || | |||||| || | |||||||||
Sbjct 26900944 TGAATCTTGGCCTTCACGTTGTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGTC 26901003
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| ||||||| || || | ||| | ||||| ||
Sbjct 26901004 TTCCCCGTCAGCGTCTTCACGAAGATCTGCATCTT 26901038
Score = 140 bits (154), Expect = 8e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| ||||| || || |||| ||||| ||||| | || | || ||
Sbjct 32122443 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 32122384
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||||||||| |||||||| || | || ||||| ||||| || |||||||||||
Sbjct 32122383 TCGAGCTGCTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGGATCCCTTCCTTGTCC 32122324
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||| ||||| |||| ||||| || | ||||| |||
Sbjct 32122323 TGGATCTTGGCCTTGACGTTATCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTC 32122264
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| ||||| | || || | ||| | ||||| ||
Sbjct 32122263 TTCCCCGTAAGGGTCTTCACGAAGATCTGCATCTT 32122229
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| ||||| || || ||||| ||||| || || |||| ||||||||||| | ||| |
Sbjct 4858214 AGCCTCAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCAAGAGTGCGG 4858155
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| ||||| ||||| || || || ||||| || | ||| ||||| ||||| || || |||
Sbjct 4858154 CCGTCTTCGAGCTGTTTGCCTGCAAAGATGAGCCTTTGCTGGTCCGGCGGGATGCCCTCC 4858095
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| || ||||| ||||| ||| | || || || || ||
Sbjct 4858094 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCCGAGCTCTCGACCTCCAAGGTA 4858035
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || || | ||| || | ||| | |||||
Sbjct 4858034 ATGGTCTTCCCAGTGAGAGTCTTCACGAAGATCTGCAT 4857997
Score = 123 bits (136), Expect = 6e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| ||||| || || || | ||||| ||||| | || | || ||
Sbjct 4857980 AGGACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGCGTGCGGCCGTCC 4857921
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | ||| ||||| || || || || ||||||||
Sbjct 4857920 TCGAGCTGCTTGCCTGCAAAGATGAGCCTTTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 4857861
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| ||| |||| || || || || || |||
Sbjct 4857860 TGGATCTTGGCCTTAACATTGTCGATGGTGTCAGAGCTTTCGACCTCCAAGGTTATGGTC 4857801
Query 225682 TTGCCCGT 225689
|| || ||
Sbjct 4857800 TTCCCGGT 4857793
>seq9
Length=34148863
Score = 154 bits (170), Expect = 4e-32
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554
||||||||| |||||||| || || || || || || | |||||||| |||| || |
Sbjct 33549205 AAGTCTCAGCACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCTGCCAGGGTGCG 33549264
Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614
||||| || |||||||| ||||| ||||| || | ||| ||||| || |||||||| ||
Sbjct 33549265 GCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCCGGGGGAATACCCTC 33549324
Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674
|||||| || ||||| ||| ||| ||||||||||| ||| | ||||| || | ||
Sbjct 33549325 CTTGTCCTGAATCTTGGCCTTTACATTGTCGATGGTGTCCGAGCTCTCCACCTCAAGGGT 33549384
Query 225675 GATCGTCTTGCCCGTCAAAG 225694
||| ||||| || |||||||
Sbjct 33549385 GATGGTCTTCCCGGTCAAAG 33549404
Score = 127 bits (140), Expect = 5e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || |||||||| || || | |||||||| |||| || | || ||
Sbjct 33541420 AGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCCAGGGTGCGGCCGTCC 33541361
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
||||||||||||||||||||||| || | || || || || ||||| || ||||||||
Sbjct 33541360 TCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGTGGAATCCCCTCCTTGTCC 33541301
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||| ||||| ||| | ||||| || || || || |||
Sbjct 33541300 TGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACCTCCAAGGTAATGGTC 33541241
Query 225682 TTGCCCGT 225689
|| || ||
Sbjct 33541240 TTCCCGGT 33541233
Score = 123 bits (136), Expect = 6e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || |||||||| || || | |||||||| |||| || | ||| ||
Sbjct 33548984 AGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCCAGGGTGCGCCCGTCC 33549043
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||||||||| ||||| || | || || || || ||||| || ||||||||
Sbjct 33549044 TCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCCGGTGGAATCCCCTCCTTGTCC 33549103
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||||||| ||| ||| || || ||||| || | ||||| || || || || |||
Sbjct 33549104 TGGATCTTTGCCTTGACATTATCAATCGTGTCCGAACTCTCCACCTCCAAGGTAATGGTC 33549163
Query 225682 TTGCCCGT 225689
|| || ||
Sbjct 33549164 TTCCCTGT 33549171
Score = 104 bits (114), Expect = 6e-17
Identities = 152/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||| ||||| || || |||| ||||| ||||| | || | || ||
Sbjct 11331980 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCC 11332039
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | || ||| |||||||| | || | ||||| ||| | || | |||| ||
Sbjct 11332040 TCGATCT----CCCCGCGAAGATGATACGCGGCTGGTCCGGCTGGATGTCCTCCTCCTCC 11332095
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| ||||| ||||| || | ||||| || | |||||||||
Sbjct 11332096 TGGATCTTAGCCTTCACGTTGTCGATCGTGTCCGACGACTCCACCTCGAGGGTGATCGTC 11332155
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||||||| | || || | || | |||||| ||
Sbjct 11332156 TTGCCCGTGAGGGTCTTCACAAAGATTTGCATCTT 11332190
>seq3
Length=30470407
Score = 154 bits (170), Expect = 4e-32
Identities = 163/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| ||||| || || |||| |||||| || || | || | ||||||
Sbjct 5990990 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCGAGGGTGCGCCCATCC 5991049
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||||||||| || ||||| || || || ||||| ||||| || || ||||| ||
Sbjct 5991050 TCGAGCTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTATCC 5991109
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| ||||||||||| || | ||||| || | |||||||||
Sbjct 5991110 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATCGTC 5991169
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| ||||| | ||| || | ||| | ||||| ||
Sbjct 5991170 TTCCCCGTGAGAGTCTTCACGAAGATCTGCATCTT 5991204
>seq11
Length=25514024
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| || || || || |||| || || ||||| | || | || ||
Sbjct 15140726 AGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCGGCGAGGGTGCGGCCGTCC 15140785
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||||||||| |||||||| || || || ||||| ||||| || || ||||||||
Sbjct 15140786 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 15140845
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| ||||| ||||| || | ||||| || | |||||||||
Sbjct 15140846 TGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGACGACTCCACCTCAAGGGTGATCGTC 15140905
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||||||||| || | ||| | |||||
Sbjct 15140906 TTCCCCGTCAAAGTCTTCACGAAGATCTGCAT 15140937
Score = 132 bits (146), Expect = 1e-25
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| |||||||| || || |||| ||||| || || | ||| | || ||
Sbjct 16241430 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTACGGCCGTCC 16241489
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | ||| ||||| || ||||| |||||||||||
Sbjct 16241490 TCGAGCTGCTTGCCCGCAAAGATGAGCCTTTGCTGGTCCGGTGGAATGCCTTCCTTGTCC 16241549
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| |||||| ||||||||||| ||| | || || || | |||||||||
Sbjct 16241550 TGAATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCTCTCGACTTCGAGGGTGATCGTC 16241609
Query 225682 TTGCCCGT 225689
|| || ||
Sbjct 16241610 TTCCCGGT 16241617
Score = 95.1 bits (104), Expect = 3e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564
|| ||||||||||| || || || || | ||||| || || | || | || || ||
Sbjct 19732795 ACTAGGTGGAGAGTTGACTCCTTCTGTATGTTGTAGTCCGCAAGCGTACGGCCGTCCTCG 19732854
Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624
|||||||| || |||||||| || | ||| ||||| ||||| || || ||||||||||||
Sbjct 19732855 AGCTGCTTGCCTGCGAAGATGAGCCTTTGCTGGTCCGGCGGGATCCCCTCCTTGTCTTGG 19732914
Query 225625 ATCTT 225629
|||||
Sbjct 19732915 ATCTT 19732919
>seq6
Length=34899179
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| ||||||||||| || |||| || || || |||| || | ||||||
Sbjct 13154755 AGGACCAGGTGAAGAGTGGATTCCTTCTGGATGTTATAGTCTGCCAGTGTGCGCCCATCC 13154696
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | |||||||| || || || || ||||||||
Sbjct 13154695 TCGAGCTGCTTACCCGCAAAGATTAGCCTCTGTTGGTCTGGTGGGATTCCCTCCTTGTCC 13154636
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| |||||| ||||||| ||||| ||||| ||| | || || || | ||||| |||
Sbjct 13154635 TGTATCTTTGCCTTCACATTGTCGATAGTGTCCGAGCTCTCAACCTCCAGAGTGATGGTC 13154576
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| | ||||| | || | ||||||
Sbjct 13154575 TTCCCCGTGAGGGTTTTCACAAAAATTTGCAT 13154544
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| ||||||||||| ||||| || ||||||| ||||| || || | || | |||||
Sbjct 13144374 AGTACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCC 13144315
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| ||||| || || | | ||| ||||| || || || || ||||| ||
Sbjct 13144314 TCAAGTTGCTTGCCAGCAAATATCAACCTTTGCTGGTCCGGGGGTATTCCCTCCTTATCC 13144255
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| || ||| || |||||||| |||| ||| || || | |||||||||
Sbjct 13144254 TGGATCTTGGCTTTGACATTGTCAATGGTGTCAGAGGATTCAACCTCAAGGGTGATCGTC 13144195
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | |||||| | || | ||||||
Sbjct 13144194 TTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 13144163
>seq1
Length=27573629
Score = 136 bits (150), Expect = 9e-27
Identities = 165/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| |||||||| ||||| || || |||| ||||| || || | ||
Sbjct 19376101 ACGAAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCGAGGGT 19376160
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||| || || ||||||||||| || || || || || || ||||| ||||| || ||
Sbjct 19376161 GCGCCCGTCCTCGAGCTGCTTCCCGGCAAATATGAGGCGCTGCTGGTCCGGCGGGATCCC 19376220
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| || ||||||||||| || | ||||| || |
Sbjct 19376221 CTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAG 19376280
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||||||||| || || | || || | ||| | ||||| ||
Sbjct 19376281 GGTGATCGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATCTT 19376325
>seq1007
Length=1704909
Score = 131 bits (144), Expect = 4e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| ||||| || || |||| ||||| ||||| | || | || ||
Sbjct 32316 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 32375
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||||||||| |||||||| || || || ||||| | ||||| |||||||||||
Sbjct 32376 TCGAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCTGAGGAATCCCTTCCTTGTCC 32435
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||| ||| || | ||||| || | || ||||||
Sbjct 32436 TGGATCTTGGCCTTGACGTTGTCGATGGCGTCCGATGACTCCACCTCGAGGGTAATCGTC 32495
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| || || | || || | ||| | ||||| ||
Sbjct 32496 TTCCCGGTGAGGGTCTTCACGAAGATCTGCATCTT 32530
>seq5
Length=29377369
Score = 120 bits (132), Expect = 7e-22
Identities = 159/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| ||||||| || | || || || ||||| || |||| ||||||||| || ||
Sbjct 457745 CGGAGTCTCATTACCAAATGAAGGGTAGATTCCTTGTGGATGGAGTAATCGGCTAAGGTG 457686
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||| | ||||| || || ||||| || | ||| ||||| || |||||
Sbjct 457685 CGGCCATCTTCCAATTGCTTGCCGGCAAAGATGAGCCTTTGCTGGTCCACAGGGATACCC 457626
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||||||||| ||||| ||||||| ||||||||||| ||| | || || || |
Sbjct 457625 TCCTTGTCTTGCATCTTAGCCTTCACATTCTCGATGGTGTCCGAGCTCTCGACCTCGAGG 457566
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| | || ||||| || | || || ||||| | ||||||
Sbjct 457565 GTGGTGGTTTTGCCGGTAAGGGTCTTGATGAAGATTTGCAT 457525
Score = 120 bits (132), Expect = 7e-22
Identities = 163/224 (73%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| |||| || || ||||| ||||||||||| || || | |||| ||| ||| |||
Sbjct 457977 ACGGAGTCGGAGAACCAGGTGAAGAGTGGATTCCTTCTGAATGCTGTAGTCGTCCAGAGT 457918
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || ||||| ||||| || ||||| || | || || || || | || ||
Sbjct 457917 GCGGCCATCCTCGAGCTGTTTCCCGGCAAAGATGAGCCTCTGCTGATCCGGTGAGATGCC 457858
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTT--CGATGGTGTCTGAGGTTTCCACGTCT 225669
|||||||| |||||| ||||||| | || || |||| ||||||||| | ||||| ||
Sbjct 457857 CTCCTTGTCATGGATC-TTTGCTTTA-AGATTGGCGATCGTGTCTGAGCTCTCCACCTCC 457800
Query 225670 AACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
| ||||| || || || || | ||||| | || | ||||||
Sbjct 457799 AGGGTGATGGTGTTTCCGGTGAGGGTTTTGACAAAAATTTGCAT 457756
>seq4576
Length=2771
Score = 114 bits (126), Expect = 3e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| || || ||||| |||| ||||| || || | || | |||||
Sbjct 2702 AGGACGAGGTGGAGCGTCGACTCTTTCTGGATGTTGTAGTCCGCAAGCGTACGGCCATCC 2643
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||| || || | ||| |||||||| || || || || |||||
Sbjct 2642 TCGAGCTGCTTGCCCGCGAAAATGAGCCTTTGCTGGTCGGGAGGGATGCCCTCTTTGTCC 2583
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| || || ||||||||||| ||| |||| || || | ||||| ||
Sbjct 2582 TGGATCTTAGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTT 2523
Query 225682 TTGCCCGT 225689
|| || ||
Sbjct 2522 TTTCCAGT 2515
>seq7
Length=28617404
Score = 107 bits (118), Expect = 5e-18
Identities = 101/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554
||| || ||||||||||| ||||| || ||||| |||| |||||||| |||| ||||
Sbjct 27638081 AAGCCTGAGGACAAGGTGCAGAGTTGACTCTTTCTGGATGTTGTAATCAGCCAGGGTTCG 27638140
Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614
|||||||| |||||||| || || ||||| | || || ||||| || || || || ||
Sbjct 27638141 GCCATCTTCCAGCTGCTTACCTGCAAAGATCAATCTCTGCTGGTCTGGAGGTATCCCCTC 27638200
Query 225615 CTTGTCTTG 225623
|||||| ||
Sbjct 27638201 CTTGTCCTG 27638209
>seq2
Length=22054697
Score = 107 bits (118), Expect = 5e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| |||| ||||| || | | ||||| || || |||| |||| ||||| | |||
Sbjct 17986761 CGGAGTCGAAGGACCAGAAAGTGCGTGGACTCCTTCTGGATCCTGTAGTCGGCGAGAGTG 17986820
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| || | |||||| ||||| |||||||||| || || |||
Sbjct 17986821 CGGCCGTCCTCGAGCTGCTTGCCGGAGAAGATGAGTCGCTGTTGGTCGGTAGGGATGCCT 17986880
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||| || |||||||| ||| | ||||||||||| ||| |||||| || | |
Sbjct 17986881 TCCACGTTTTGGATCTCGGCCTTGAGGTTATCGATGGTGTCAGAGCTTTCCATATCAACC 17986940
Query 225673 GTGATCGTCTTGCCCGT 225689
||||| ||||||| ||
Sbjct 17986941 GTGATGATCTTGCCGGT 17986957
>seq5789
Length=6742
Score = 96.9 bits (106), Expect = 8e-15
Identities = 64/71 (90%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696
|| ||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||||
Sbjct 3396 AGGGGGTAGCGACTGTTTCTTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATA 3337
Query 372697 GGGTCTGACAC 372707
| |||||||||
Sbjct 3336 GAGTCTGACAC 3326
>seq1382
Length=172696
Score = 96.9 bits (106), Expect = 8e-15
Identities = 74/88 (84%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 4472 ATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCTG 4531
||||||| ||||||||||| ||||| ||||| || |||||||| || || || || ||||
Sbjct 51765 ATATTTGTCCATCAGTAATGGAGATCACATTGGTTGGGATATAGGCCGATACGTCCCCTG 51824
Query 4532 CTTGTGTTTCGACAACAGGTAAGGCTGT 4559
|||||||||| | || |||||||||||
Sbjct 51825 CTTGTGTTTCAATGACGGGTAAGGCTGT 51852
>seq2973
Length=40044
Score = 95.1 bits (104), Expect = 3e-14
Identities = 102/134 (76%), Gaps = 1/134 (1%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||||||||| || || || || | ||||| || || | || | || ||
Sbjct 14946 AGCACTAGGTGGAGAGTCGACTCCTTCTGTATGTTGTAGTCCGCAAGCGTACGGCCGTCC 14887
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| ||||| |||||||| || | ||| ||||| ||||| || || |||||||||
Sbjct 14886 TCCAGCTGTTTCCCGGCGAAGATTAGCCTTTGCTGGTCCGGCGGGATCCCCTCCTTGTCT 14827
Query 225622 TGGATCTTTTGCTT 225635
|| ||| |||||||
Sbjct 14826 TGAATC-TTTGCTT 14814
Score = 84.2 bits (92), Expect = 5e-11
Identities = 95/126 (75%), Gaps = 1/126 (1%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||||||||| || || || |||| || || || || | || || || ||
Sbjct 39199 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTT-TAGTCCGCAAGCGTACTGCCGTCC 39141
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || ||| |||| || | ||| ||||| || || || || |||||||||
Sbjct 39140 TCGAGGTGCTTGCCTGCGGAGATGAGCCTTTGCTGGTCCGGGGGGATCCCCTCCTTGTCT 39081
Query 225622 TGGATC 225627
||||||
Sbjct 39080 TGGATC 39075
>seq1035
Length=594915
Score = 89.7 bits (98), Expect = 1e-12
Identities = 104/139 (75%), Gaps = 1/139 (1%)
Strand=Plus/Plus
Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783
||| || || | ||||||| || | ||||| |||| ||||||||||||| |||||||||
Sbjct 1525 TATGTCAAGAGCTGGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACCGC 1584
Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843
|| | | | |||||| || |||||||||| | ||| |||| | | |||| ||
Sbjct 1585 TTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCGGTCGAGCGACCGTACTCCCCAGGCGG 1644
Query 7844 AATATTT-ACGCGTTAGCT 7861
| | ||| |||||||||||
Sbjct 1645 AGTGTTTAACGCGTTAGCT 1663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192420287517746
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |