Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1007 152 4e-32
seq1 152 4e-32
seq8 147 2e-30
seq3 147 2e-30
seq11 145 5e-30
seq9 138 8e-28
seq6 125 5e-24
seq5 111 1e-19
seq7 91.5 1e-13
seq4576 87.8 1e-12
>seq1007
Length=1704909
Score = 152 bits (168), Expect = 4e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| ||||||||||| |||||||| ||| |||| ||
Sbjct 32319 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCG 32378
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||||||||| ||||| | |||||||| || ||| | |||||||| |||
Sbjct 32379 AGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCTGAGGAATCCCTTCCTTGTCCTGG 32438
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||| ||| | || |||||||| | |||||||||||
Sbjct 32439 ATCTTGGCCTTGACGTTGTCGATGGCGTCCGATGACTCCACCTCGAGGGTAATCGTCTTC 32498
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||||||||||||||| |||||
Sbjct 32499 CCGGTGAGGGTCTTCACGAAGATCTGCAT 32527
>seq1
Length=27573629
Score = 152 bits (168), Expect = 4e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| ||||||||||| || ||||| |||| |||| ||
Sbjct 19376114 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTGCGCCCGTCCTCG 19376173
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||||||||||||||| || | |||||||| || | || | || ||||| |||
Sbjct 19376174 AGCTGCTTCCCGGCAAATATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGG 19376233
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||| | | | |||||||| | || |||||||| | || ||||||||
Sbjct 19376234 ATCTTCGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTC 19376293
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||||||||||||||| |||||
Sbjct 19376294 CCGGTGAGGGTCTTCACGAAGATCTGCAT 19376322
>seq8
Length=35439739
Score = 147 bits (162), Expect = 2e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| |||||| |||||| || |||||||| |||||||| || | || |||
Sbjct 26900827 ACGAGGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCC 26900886
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||| | |||||||||||| | || | || ||||| |||
Sbjct 26900887 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGA 26900946
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || ||||| | ||||||||||| | || ||||||||
Sbjct 26900947 ATCTTGGCCTTCACGTTGTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGTCTTC 26901006
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || |||||||||||||| |||||
Sbjct 26901007 CCCGTCAGCGTCTTCACGAAGATCTGCAT 26901035
Score = 143 bits (158), Expect = 2e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| ||||||||||| |||||||| ||| |||| ||
Sbjct 32122440 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCG 32122381
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||||||||| ||||| | | |||||| || | || | |||||||| |||
Sbjct 32122380 AGCTGCTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGG 32122321
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || ||||| | ||| |||||||| | || || |||||
Sbjct 32122320 ATCTTGGCCTTGACGTTATCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTC 32122261
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||||||||||||||| |||||
Sbjct 32122260 CCCGTAAGGGTCTTCACGAAGATCTGCAT 32122232
Score = 140 bits (154), Expect = 2e-28
Identities = 159/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
|||||||||||| ||| |||||| || || ||||||||||| || ||| |||| ||
Sbjct 1222077 CACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCGGCCAGGGTGCGACCGTCCTC 1222136
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || |||||||| | | |||||| || | || | ||| ||||| |||
Sbjct 1222137 GAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCCTG 1222196
Query 44248 TATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| | || ||| | || ||||| | | || ||||||| || || ||||
Sbjct 1222197 GATCTT-TGCCTTAACGTTGTCGATCGTGTCAGAGCTCTCAACCTCCAGGGTGATGGTCT 1222255
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| ||||||||||| |||||||| |||||
Sbjct 1222256 TTCCAGTGAGGGTCTTGACGAAGATCTGCAT 1222286
Score = 134 bits (148), Expect = 1e-26
Identities = 169/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || |||| |||||| || |||||| |||||| ||||||||||||||
Sbjct 4858227 CATCCCTCCCCTGAGCCTCAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATC 4858168
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||| || ||| |||| || ||||| || || |||||||| | | ||||| || |
Sbjct 4858167 GGCAAGAGTGCGGCCGTCTTCGAGCTGTTTGCCTGCAAAGATGAGCCTTTGCTGGTCCGG 4858108
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | || ||||| | | ||
Sbjct 4858107 CGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCCGAGCTCTC 4858048
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||| ||||| ||||| || ||||| |||||||||||||| ||||||
Sbjct 4858047 GACCTCCAAGGTAATGGTCTTCCCAGTGAGAGTCTTCACGAAGATCTGCATG 4857996
Score = 123 bits (136), Expect = 2e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || ||||||| |||||| ||||| ||| |||||| || ||||| || ||
Sbjct 1222284 CATACCTCCCCTGAGTCTCAGCACCAGATGAAGGGTGGACTCCTTCTGAATGTTATAGTC 1222343
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||| | ||| | || || |||||||| ||||||||||| | | |||||| || |
Sbjct 1222344 GGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGG 1222403
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
||| | || ||||| ||| ||||| || | || ||| | || ||||| | | |
Sbjct 1222404 AGGGATGCCCTCCTTGTCCTGGATCTT-GGCCTTAACGTTGTCGATCGTGTCCGAGCTCT 1222462
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| | || || ||||| || ||||| |||||||| ||||| |||||
Sbjct 1222463 CGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 1222514
Score = 123 bits (136), Expect = 2e-23
Identities = 155/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| || |||||||| |||||||| ||| |||| ||
Sbjct 4857977 ACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCG 4857918
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | | ||||| || | || | || ||||| |||
Sbjct 4857917 AGCTGCTTGCCTGCAAAGATGAGCCTTTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 4857858
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||| | | ||| ||||||| || || ||||
Sbjct 4857857 ATCTTGGCCTTAACATTGT--CGATGGTGTCAGAGCTTTCGACCTCCAAGGTTATGGTCT 4857800
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || |||||||||||||| ||||| |||||
Sbjct 4857799 TCCCGGTGAGGGTCTTCACAAAGATCTGCAT 4857769
Score = 116 bits (128), Expect = 3e-21
Identities = 154/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| ||||| || ||| |||||| || ||||| || ||||| | ||| |||| ||
Sbjct 1223248 CACGAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCCAAGGTGCGGCCGTCTTC 1223307
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || || ||||| | | |||||| || | || | || ||||| ||
Sbjct 1223308 GAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTGTCTTG 1223367
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | |||||||||| |||||| ||||| | || || |||
Sbjct 1223368 GATCTTGGCCTTAACATTGT--CGATGGTGTCGGAGGATTCAACCTCTAGGGTGATGGTC 1223425
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||||||| ||||||||||| |||||
Sbjct 1223426 TTGCCAGTGAGGGTTTTCACGAAGATCTGCAT 1223457
>seq3
Length=30470407
Score = 147 bits (162), Expect = 2e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| ||||| ||||| || ||||| |||| | || ||
Sbjct 5990993 ACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCGAGGGTGCGCCCATCCTCG 5991052
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||||||||||||||| | |||||||| || | || | || ||||| |||
Sbjct 5991053 AGCTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTATCCTGG 5991112
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | |||||||| | || |||||||| | || ||||||||
Sbjct 5991113 ATCTTGGCCTTCACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATCGTCTTC 5991172
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| |||||||||||||| |||||
Sbjct 5991173 CCCGTGAGAGTCTTCACGAAGATCTGCAT 5991201
Score = 86.0 bits (94), Expect = 5e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 44106 TCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT 44165
||||||| || || || ||||| || |||||||| || |||||| || ||||||||||
Sbjct 29005014 TCATTCCGCCCCTGAGCCTCAAGACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAAT 29005073
Query 44166 CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| || | ||| | || |||| ||||| || ||||| ||||| | ||||| ||||
Sbjct 29005074 CAGCCAAGGTGCGGCCATCTTCCAATTGCTTTCCCGCAAAAATCAACCTTTGCTGGTCTG 29005133
Query 44226 AAGGCACACCTTCCTTTTCC 44245
||| | || ||||| |||
Sbjct 29005134 GAGGTATCCCCTCCTTGTCC 29005153
>seq11
Length=25514024
Score = 145 bits (160), Expect = 5e-30
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || || |||||| |||||||| || |||||||| ||| |||| ||
Sbjct 15140728 CACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCGGCGAGGGTGCGGCCGTCCTC 15140787
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||||||||| ||||| | |||||||| || | || | || ||||| |||
Sbjct 15140788 CAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 15140847
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|||||| ||||| | | || ||||| | || |||||||| | || ||||||||
Sbjct 15140848 GATCTTCGCCTTCACGTTGTCGATCGTGTCCGACGACTCCACCTCAAGGGTGATCGTCTT 15140907
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | |||||||||||||| |||||
Sbjct 15140908 CCCCGTCAAAGTCTTCACGAAGATCTGCAT 15140937
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| ||| |||||| ||||||||||| || || || || |||| ||
Sbjct 16241433 ACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTACGGCCGTCCTCG 16241492
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | | ||||| || | || | |||||||| |||
Sbjct 16241493 AGCTGCTTGCCCGCAAAGATGAGCCTTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGA 16241552
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | |||||||| | | || || || | || ||||||||
Sbjct 16241553 ATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCTCTCGACTTCGAGGGTGATCGTCTTC 16241612
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| |||||||| ||||| |||||
Sbjct 16241613 CCGGTGAGCGTCTTCACAAAGATCTGCAT 16241641
>seq9
Length=34148863
Score = 138 bits (152), Expect = 8e-28
Identities = 157/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
|||||||||||| ||| ||||| || ||||||||||| || || |||| |||| ||
Sbjct 33548986 CACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCCAGGGTGCGCCCGTCCTC 33549045
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||||||| |||||||||| | ||||||||| | || | || ||||| |||
Sbjct 33549046 CAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCCGGTGGAATCCCCTCCTTGTCCTG 33549105
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || ||||| | |||||||||| ||||| |||||
Sbjct 33549106 GATCTTTGCCTTGACATTATCAATCGTGTCCGAACTCTCCACCTCCAAGGTAATGGTCTT 33549165
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||| ||||| || ||||| ||||||
Sbjct 33549166 CCCTGTGAGCGTCTTAACAAAGATCTGCATG 33549196
Score = 132 bits (146), Expect = 3e-26
Identities = 156/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
|||||||||||| ||| ||||| || ||||||||||| || || ||| |||| ||
Sbjct 33541418 CACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCCAGGGTGCGGCCGTCCTC 33541359
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||||| || ||||| | | ||||||||| | || | || ||||| |||
Sbjct 33541358 TAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGTGGAATCCCCTCCTTGTCCTG 33541299
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|||||| ||| | | | || ||||| | | |||||||||| ||||| |||||
Sbjct 33541298 GATCTTCGCCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACCTCCAAGGTAATGGTCTT 33541239
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||||||||| || ||||| ||||||
Sbjct 33541238 CCCGGTGAGGGTCTTAACAAAGATCTGCATG 33541208
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| ||||||||||| |||||||| ||| |||| ||
Sbjct 11331983 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCG 11332042
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
| || ||| || ||||| | |||| |||| || | | | | |||| |||
Sbjct 11332043 ATCT----CCCCGCGAAGATGATACGCGGCTGGTCCGGCTGGATGTCCTCCTCCTCCTGG 11332098
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || ||||| | || |||||||| | || ||||||||
Sbjct 11332099 ATCTTAGCCTTCACGTTGTCGATCGTGTCCGACGACTCCACCTCGAGGGTGATCGTCTTG 11332158
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||||||||||| |||||||||||
Sbjct 11332159 CCCGTGAGGGTCTTCACAAAGATTTGCAT 11332187
Score = 96.9 bits (106), Expect = 2e-15
Identities = 148/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || ||||||| ||| |||||||| || |||||| || |||||||||||
Sbjct 33549193 CATGCCACCCCTAAGTCTCAGCACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATC 33549252
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || |||||||| || |||||||| | | ||||| || |
Sbjct 33549253 TGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCCGG 33549312
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | ||| ||||| ||| ||||| ||| || ||| | |||||||| | |
Sbjct 33549313 GGGAATACCCTCCTTGTCCTGAATCTTGGCCTTTACATTGT--CGATGGTGTCCGAGCTC 33549370
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGT 44313
|||||||| | || || ||||| || ||
Sbjct 33549371 TCCACCTCAAGGGTGATGGTCTTCCCGGT 33549399
>seq6
Length=34899179
Score = 125 bits (138), Expect = 5e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||||||||| ||| ||||| |||||||| || || || ||| |||| | || ||
Sbjct 13154752 ACCAGGTGAAGAGTGGATTCCTTCTGGATGTTATAGTCTGCCAGTGTGCGCCCATCCTCG 13154693
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | | ||| || |||| || | || ||||| ||| |
Sbjct 13154692 AGCTGCTTACCCGCAAAGATTAGCCTCTGTTGGTCTGGTGGGATTCCCTCCTTGTCCTGT 13154633
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || ||||| | | || ||||||| || || |||||
Sbjct 13154632 ATCTTTGCCTTCACATTGTCGATAGTGTCCGAGCTCTCAACCTCCAGAGTGATGGTCTTC 13154573
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||||| ||||| || ||||||||
Sbjct 13154572 CCCGTGAGGGTTTTCACAAAAATTTGCAT 13154544
Score = 122 bits (134), Expect = 6e-23
Identities = 156/212 (74%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||||||||||||||| || || || ||| | || ||
Sbjct 13144371 ACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCA 13144312
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || ||||| ||||| | ||||| || | || | || ||||| |||
Sbjct 13144311 AGTTGCTTGCCAGCAAATATCAACCTTTGCTGGTCCGGGGGTATTCCCTCCTTATCCTGG 13144252
Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| |||| || ||| | |||||||| | |||||| ||||| | || ||||||
Sbjct 13144251 ATCTTG-GCTTTGACATTGT--CAATGGTGTCAGAGGATTCAACCTCAAGGGTGATCGTC 13144195
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| || || || |||||||||||
Sbjct 13144194 TTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 13144163
>seq5
Length=29377369
Score = 111 bits (122), Expect = 1e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191
||||| || ||| |||||| |||||| |||||| ||||| || | || || ||
Sbjct 457502 AGGTGGAGGGTGGACTCCTTCTGGATGGAGTAATCAGCGAGAGTCCGGCCATCCTCGAGT 457443
Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251
||||| |||| ||||||||| | |||| ||| || | |||||||| ||| |||
Sbjct 457442 TGCTTGCCGGAAAAGATCAACCTTTGCTCGTCTTGGGGGATTCCTTCCTTCTCCCGGATC 457383
Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311
|| ||| || | | | |||||||| |||||| ||||| | || ||||| ||
Sbjct 457382 TTGGCCTTTAAATTCTCGACGGTGTCGGAGGATTCAACCTCGAGACGGATGGTCTTGCCG 457323
Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || |||||||||||||||||
Sbjct 457322 GTGAGAGTTTTCACGAAGATTTGCAT 457297
Score = 109 bits (120), Expect = 4e-19
Identities = 172/243 (71%), Gaps = 4/243 (2%)
Strand=Plus/Minus
Query 44098 TTTTTATTTCATT--CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGG 44155
|||| |||||| | || || | |||| | ||||||||||| ||| ||||| ||
Sbjct 457997 TTTTCATTTCACTGGCCACCACGGAGTCGGAGAACCAGGTGAAGAGTGGATTCCTTCTGA 457938
Query 44156 ATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGC 44215
||| |||| ||| | || ||| | || || ||||| |||||||||||||| | | |
Sbjct 457937 ATGCTGTAGTCGTCCAGAGTGCGGCCATCCTCGAGCTGTTTCCCGGCAAAGATGAGCCTC 457878
Query 44216 TGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGT 44274
|||||||| | | | || ||||| || ||||| ||||| || || | || ||
Sbjct 457877 TGCTGATCCGGTGAGATGCCCTCCTTGTCATGGATCTT-TGCTTTAAGATTGGCGATCGT 457819
Query 44275 GTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTG 44334
||| | | |||||||||| || || || ||||| |||||||| || || || |||||
Sbjct 457818 GTCTGAGCTCTCCACCTCCAGGGTGATGGTGTTTCCGGTGAGGGTTTTGACAAAAATTTG 457759
Query 44335 CAT 44337
|||
Sbjct 457758 CAT 457756
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169
|||||| | ||||||| |||| ||||| || ||||| |||||| |||||||||
Sbjct 457752 TCCCCCCCGGAGTCTCATTACCAAATGAAGGGTAGATTCCTTGTGGATGGAGTAATCGGC 457693
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
| ||| | || |||| ||||| ||||||||||| | | ||||| || |||
Sbjct 457692 TAAGGTGCGGCCATCTTCCAATTGCTTGCCGGCAAAGATGAGCCTTTGCTGGTCCACAGG 457633
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289
| ||| ||||| || ||||| ||||| | | |||||||| | | || ||
Sbjct 457632 GATACCCTCCTTGTCTTGCATCTTAGCCTTCACATTCTCGATGGTGTCCGAGCTCTCGAC 457573
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||| | || | || || || || |||||||| | |||||||||||||
Sbjct 457572 CTCGAGGGTGGTGGTTTTGCCGGTAAGGGTCTTGATGAAGATTTGCATG 457524
>seq7
Length=28617404
Score = 91.5 bits (100), Expect = 1e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 44106 TCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT 44165
||||||| || || || || | || ||||| || || ||| || |||||||||||||
Sbjct 27638068 TCATTCCGCCCCTAAGCCTGAGGACAAGGTGCAGAGTTGACTCTTTCTGGATGTTGTAAT 27638127
Query 44166 CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| || || || | || ||||||||||| || ||||||||||| | |||||| ||||
Sbjct 27638128 CAGCCAGGGTTCGGCCATCTTCCAGCTGCTTACCTGCAAAGATCAATCTCTGCTGGTCTG 27638187
Query 44226 AAGGCACACCTTCCTTTTCC 44245
||| | || ||||| |||
Sbjct 27638188 GAGGTATCCCCTCCTTGTCC 27638207
>seq4576
Length=2771
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| ||||| ||| || ||||||||||| || || || || | || ||
Sbjct 2699 ACGAGGTGGAGCGTCGACTCTTTCTGGATGTTGTAGTCCGCAAGCGTACGGCCATCCTCG 2640
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || || || | | ||||| || | ||| | || || || |||
Sbjct 2639 AGCTGCTTGCCCGCGAAAATGAGCCTTTGCTGGTCGGGAGGGATGCCCTCTTTGTCCTGG 2580
Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| |||| | ||| | |||||||||| | ||| ||||| | || || || ||
Sbjct 2579 ATCTT-AGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTTTT 2521
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| ||||| ||||| || ||||| |||||
Sbjct 2520 TCCAGTGAGCGTCTTAACAAAGATCTGCAT 2491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359958551986803
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |