Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq4576 187 6e-42
seq8 187 6e-42
seq11 165 2e-35
seq1007 159 8e-34
seq5 159 8e-34
seq6 156 1e-32
seq1 156 1e-32
seq3 150 4e-31
seq9 143 6e-29
seq2 107 5e-18
seq10 105 2e-17
seq2973 104 6e-17
>seq4576
Length=2771
Score = 187 bits (206), Expect = 6e-42
Identities = 165/206 (80%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| |||||||| |||||||||||||| |||||||| |||
Sbjct 2494 CAGATCTTTGTTAAGACGCTCACTGGAAAAACCATCACCCTCGAGGTCGAAAGCTCCGAC 2553
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||||||| ||||| ||||||||||| || |||||||| |||||||||
Sbjct 2554 ACCATCGACAACGTCAAAGCTAAGATCCAGGACAAAGAGGGCATCCCTCCCGACCAGCAA 2613
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || ||||| || || |||||||| ||||| | || ||||| || || ||| ||
Sbjct 2614 AGGCTCATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTTGCGGACTACAACATC 2673
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| ||||| || || || || || ||
Sbjct 2674 CAGAAAGAGTCGACGCTCCACCTCGT 2699
>seq8
Length=35439739
Score = 187 bits (206), Expect = 6e-42
Identities = 172/218 (79%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| |||||||| || || || || ||| | ||||| || ||||| |||
Sbjct 4858000 CAGATCTTCGTGAAGACTCTCACTGGGAAGACCATTACCTTGGAGGTCGAGAGCTCGGAC 4858059
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| |||||||| || || ||||| ||||||||||||
Sbjct 4858060 ACAATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAA 4858119
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || |||||||||||||| || | |||||||||||||| ||| ||
Sbjct 4858120 AGGCTCATCTTTGCAGGCAAACAGCTCGAAGACGGCCGCACTCTTGCCGATTACAACATC 4858179
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|| || || || || || ||||| || |||| |||||
Sbjct 4858180 CAGAAGGAGTCCACGCTCCATCTGGTGCTGAGGCTCAG 4858217
Score = 178 bits (196), Expect = 3e-39
Identities = 170/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| |||||||| || || || |||||||||||||| || ||||| |||
Sbjct 1222511 CAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCGGAC 1222452
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||| |||||||| || || |||||||||||||||||
Sbjct 1222451 ACGATCGACAACGTTAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAG 1222392
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| ||||| || |||||||| ||||| | || | ||||| |||||| |
Sbjct 1222391 AGGCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTATAACATT 1222332
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|| || || || || || ||||| || ||||||||||
Sbjct 1222331 CAGAAGGAGTCCACCCTTCATCTGGTGCTGAGACTCAG 1222294
Score = 159 bits (176), Expect = 8e-34
Identities = 159/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || ||||||||||||||||| ||| |||
Sbjct 32122235 CAGATCTTCGTGAAGACCCTTACGGGGAAGACAATCACCCTCGAGGTGGAGTCCTCGGAC 32122294
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| |||||||| ||||| ||||| |||||||||||
Sbjct 32122295 ACGATCGATAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCGCCGGACCAGCAG 32122354
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||||||||| || |||||||| || || | || || ||||| || ||| ||
Sbjct 32122355 AGGCTCATCTTCGCCGGGAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACATC 32122414
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 32122415 CAGAAGGAGTCCACCCTCCACCTCGT 32122440
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || ||||||||||||||||||||| || |||
Sbjct 26901032 CAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACCCTCGAGGTGGAATCGTCGGAC 26900973
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| || |||||||||||||| || || ||||| ||||| |||||
Sbjct 26900972 ACGATTGACAACGTGAAGGCCAAGATTCAGGACAAGGAGGGCATCCCGCCGGATCAGCAG 26900913
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| ||||| || ||||| | || || ||||| || ||| |
Sbjct 26900912 CGTCTCATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGAACCCTCGCCGACTACAACATT 26900853
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 26900852 CAGAAGGAGTCCACGCTCCACCTCGT 26900827
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| ||||| || |||||||| ||||| || ||||| |||
Sbjct 1222283 CAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTGGAGGTTGAGAGCTCTGAC 1222224
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || |||||| |||||||| || || || || |||||||||||
Sbjct 1222223 ACGATCGACAACGTTAAGGCAAAGATCCAGGACAAGGAGGGTATTCCACCGGACCAGCAG 1222164
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| |||||||| || || || |||||||| || || | || || |||||||| || |
Sbjct 1222163 AGGCTTATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTGGCCGATTACAATATT 1222104
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 1222103 CAGAAGGAGTCCACTCTTCACCTGGT 1222078
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| ||||| || || || |||||||| ||||| ||| ||| |||
Sbjct 1223454 CAGATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTAGAGGTTGAATCCTCCGAC 1223395
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| || ||||| || || ||||| || ||||||||
Sbjct 1223394 ACCATCGACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGGATCCCCCCCGACCAGCAG 1223335
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || |||||||| || || ||||||||||| || | || | ||||| |||||| |
Sbjct 1223334 AGGCTCATCTTCGCTGGTAAGCAGCTCGAAGACGGCCGCACCTTGGCCGACTATAACATT 1223275
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 1223274 CAGAAGGAGTCCACCCTCCACCTCGT 1223249
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || ||||| || || || || ||| | ||||| |||||||| |||
Sbjct 4857772 CAGATCTTTGTGAAGACCCTCACCGGGAAGACCATAACCTTGGAGGTCGAAAGCTCTGAC 4857831
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| |||||||| || || ||||| ||||||||||||
Sbjct 4857832 ACCATCGACAATGTTAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAA 4857891
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || || |||||||| || || | || || ||||| || ||| |
Sbjct 4857892 AGGCTCATCTTTGCAGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAACATT 4857951
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 4857952 CAGAAGGAGTCCACCCTCCACCTCGT 4857977
Score = 100 bits (110), Expect = 7e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046
||||| ||||| || ||||| |||||||| || || |||||||||||||| || |
Sbjct 1222676 ATCGACAACGTTAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAACAGAGG 1222617
Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106
|| ||||||||||| || |||||||| ||||| | || | ||||| |||||| | ||
Sbjct 1222616 CTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTATAACATTCAG 1222557
Query 178107 AAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || ||
Sbjct 1222556 AAGGAGTCCACCCTCCACCTCGT 1222534
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || || || || || |||||||||||||| || ||| |||
Sbjct 5206777 CAGATCTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTCGAGAGCAGCGAC 5206718
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
|||||||| || || || ||||| |||||||| |||||
Sbjct 5206717 ACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGG 5206677
>seq11
Length=25514024
Score = 165 bits (182), Expect = 2e-35
Identities = 160/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || ||||| || || |||||||||||||| || || ||||| |||
Sbjct 16241638 CAGATCTTTGTGAAGACGCTCACCGGGAAGACGATCACCCTCGAAGTCGAGAGCTCGGAC 16241579
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || |||||||||||||| ||||| || || ||||||||||||
Sbjct 16241578 ACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAAGGCATTCCACCGGACCAGCAA 16241519
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || || |||||||| || || | |||||||| || || ||| ||
Sbjct 16241518 AGGCTCATCTTTGCGGGCAAGCAGCTCGAGGACGGCCGTACTCTTGCAGACTACAACATC 16241459
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 16241458 CAGAAGGAGTCCACTCTTCACCTCGT 16241433
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| ||| | || || || ||||||||||| |||||||| || |||
Sbjct 15140934 CAGATCTTCGTGAAGACTTTGACGGGGAAGACGATCACCCTTGAGGTGGAGTCGTCGGAC 15140875
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||| |||||||| || || ||||| |||||||||||
Sbjct 15140874 ACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAG 15140815
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || || || | || || ||||| |||||| ||
Sbjct 15140814 CGCCTCATCTTCGCCGGGAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTATAACATC 15140755
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 15140754 CAGAAGGAGTCTACCCTCCACCTGGT 15140729
Score = 102 bits (112), Expect = 2e-16
Identities = 96/121 (79%), Gaps = 1/121 (1%)
Strand=Plus/Minus
Query 177905 AAGTAAG-GTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCC 177963
||||| | || | || | | || || ||||||||||| ||||| || || || |||||||
Sbjct 25072298 AAGTACGAGTGACAAAGATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCC 25072239
Query 177964 TCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAG 178023
||||||| || ||| ||||||||||| |||||||| ||||| |||||||||||||
Sbjct 25072238 TCGAGGTCGAGAGCAGCGACACCATCGACAACGTCAAGACCAAGATCCAGGACAAAGAAG 25072179
Query 178024 G 178024
|
Sbjct 25072178 G 25072178
Score = 95.1 bits (104), Expect = 3e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 177993 AACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATC 178052
||||| ||| ||||| || ||||| || || ||||| |||||||||||| | || |||
Sbjct 19732931 AACGTGAAAGCTAAGATCCAAGACAAGGAGGGGATCCCGCCGGACCAGCAAAGGCTCATC 19732872
Query 178053 TTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112
||||| || || |||||||| || || | || ||||| || || ||| | || || ||
Sbjct 19732871 TTCGCAGGCAAGCAGCTCGAGGACGGCCGTACGCTTGCGGACTACAACATACAGAAGGAG 19732812
Query 178113 TCAACACTGCATCTTGT 178129
||||| || || || ||
Sbjct 19732811 TCAACTCTCCACCTAGT 19732795
Score = 87.8 bits (96), Expect = 4e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| |||||||| |||||||||||||| |||||||| |||
Sbjct 19733088 CAGATCTTTGTTAAGACGCTCACTGGAAAAACCATCACCCTCGAGGTCGAAAGCTCCGAC 19733029
Query 177984 ACCATCGAGAACGTCAAA 178001
|||||||| ||||| |||
Sbjct 19733028 ACCATCGACAACGTGAAA 19733011
Score = 84.2 bits (92), Expect = 5e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081
||| || || ||||||||||| ||||| ||||| ||||| || |||||||| |||||| |
Sbjct 25072085 AGGGATTCCGCCGGACCAGCAGCGACTGATCTTTGCCGGGAAGCAGCTCGAGGATGGACG 25072026
Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110
||| || ||||| || ||| | || ||||
Sbjct 25072025 GACACTCGCCGACTACAACATTCAGAAAG 25071997
>seq1007
Length=1704909
Score = 159 bits (176), Expect = 8e-34
Identities = 159/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| || || ||||| |||||||||||||| || |||
Sbjct 32524 CAGATCTTCGTGAAGACCCTCACCGGGAAGACGATTACCCTCGAGGTGGAGTCATCGGAC 32465
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||| |||||||| ||||| |||||||| ||||| || |||| |||||||||
Sbjct 32464 GCCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCTCAGGACCAGCAG 32405
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| || || | || || ||||| || ||| ||
Sbjct 32404 CGGCTCATCTTCGCCGGGAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACATC 32345
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 32344 CAGAAGGAGTCCACCCTCCACCTCGT 32319
>seq5
Length=29377369
Score = 159 bits (176), Expect = 8e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || ||||| ||||| ||||| || |||||||| |||||||| |||||||||
Sbjct 457759 CAAATTTTTGTCAAAACCCTCACCGGAAACACCATCACCCTGGAGGTGGAGAGCTCAGAC 457818
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||| || | ||| |||||| || ||||| || || ||| | ||||| |||||
Sbjct 457819 ACGATCGCCAATCTTAAAGCAAAGATCCATGACAAGGAGGGCATCTCACCGGATCAGCAG 457878
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| ||||| ||||||||||| ||||| | ||||| | ||| || | | |
Sbjct 457879 AGGCTCATCTTTGCCGGGAAACAGCTCGAGGATGGCCGCACTCTGGACGACTACAGCATT 457938
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || ||||| || || || || ||| | |||||
Sbjct 457939 CAGAAGGAATCCACTCTTCACCTGGTTCTCCGACTC 457974
Score = 147 bits (162), Expect = 5e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||| | || || || || || ||||| | |||||||||||| || ||||| |||
Sbjct 457528 CAAATCTTCATCAAGACCCTTACCGGCAAAACCACCACCCTCGAGGTCGAGAGCTCGGAC 457587
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| || ||||| || || |||||| ||||||||||
Sbjct 457588 ACCATCGAGAATGTGAAGGCTAAGATGCAAGACAAGGAGGGTATCCCTGTGGACCAGCAA 457647
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| ||||| || || | |||||||| | || | |||||||| | ||
Sbjct 457648 AGGCTCATCTTTGCCGGCAAGCAATTGGAAGATGGCCGCACCTTAGCCGATTACTCCATC 457707
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || ||||| || || ||| | || ||||||||
Sbjct 457708 CACAAGGAATCTACCCTTCATTTGGTAATGAGACTC 457743
Score = 131 bits (144), Expect = 4e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||||||||||||||| || || || ||| |||||||| ||| ||| |||
Sbjct 457300 CAAATCTTCGTGAAAACTCTCACCGGCAAGACCATCCGTCTCGAGGTTGAATCCTCCGAC 457359
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||| ||||||| | || ||||| | ||| || ||||||||||| | ||| |||||
Sbjct 457360 ACCGTCGAGAATTTAAAGGCCAAGATCCGGGAGAAGGAAGGAATCCCCCAAGACGAGCAA 457419
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| |||| || || ||||| ||||| ||||||| || ||||| | ||
Sbjct 457420 AGGTTGATCTTTTCCGGCAAGCAACTCGAGGATGGCCGGACTCTCGCTGATTACTCCATC 457479
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || || || ||| ||
Sbjct 457480 CAGAAGGAGTCCACCCTCCACCTTATT 457506
>seq6
Length=34899179
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || ||||||||||| ||||| ||||||||||| ||||| ||| ||| |||
Sbjct 13144166 CAAATCTTTGTCAAAACTCTCACTGGAAAGACGATCACCCTTGAGGTTGAATCCTCTGAC 13144225
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || |||||| ||||| ||||| || || ||||| || ||||||||||||
Sbjct 13144226 ACCATTGACAATGTCAAAGCCAAGATCCAGGATAAGGAGGGAATACCCCCGGACCAGCAA 13144285
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || || || || || || || || ||||| | || ||||| || || ||| ||
Sbjct 13144286 AGGTTGATATTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTGCTGACTACAACATC 13144345
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| || || || || || |||||
Sbjct 13144346 CAAAAGGAGTCCACCCTCCACCTTGT 13144371
>seq1
Length=27573629
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| || || |||||||||||||||||||| || |||
Sbjct 19376319 CAGATCTTCGTGAAGACCCTCACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCGGAC 19376260
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || ||||| |||||||||||
Sbjct 19376259 ACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCGGACCAGCAG 19376200
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || ||||| || |||||||| || || | || || || || || ||| ||
Sbjct 19376199 CGCCTCATATTTGCCGGGAAGCAGCTCGAGGACGGGCGCACCCTCGCAGACTACAACATC 19376140
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 19376139 CAGAAGGAGTCCACCCTCCACCTCGT 19376114
>seq3
Length=30470407
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| |||||||| || || |||||||||||||||||||| || |||
Sbjct 5991198 CAGATCTTCGTGAAGACTCTCACGGGGAAGACGATCACCCTCGAGGTGGAGTCGTCGGAC 5991139
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| ||||| || || || ||||| || ||||||||
Sbjct 5991138 ACCATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCGCCTGACCAGCAG 5991079
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| ||||| || |||||||| ||||| | || || || || || || ||
Sbjct 5991078 CGCCTCATCTTTGCCGGGAAGCAGCTCGAGGATGGGCGCACCCTCGCGGACTACAATATC 5991019
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 5991018 CAGAAGGAGTCCACCCTCCACCTCGT 5990993
Score = 87.8 bits (96), Expect = 4e-12
Identities = 74/91 (81%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || || || || ||||||||||||||||| || ||| |||
Sbjct 29005413 CAGATATTCGTGAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAGAGCAGCGAC 29005354
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGG 178014
|||||||| ||||||||| ||||| ||||
Sbjct 29005353 ACCATCGACAACGTCAAAGCCAAGATCCAGG 29005323
>seq9
Length=34148863
Score = 143 bits (158), Expect = 6e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || |||||||| |||||||| ||||| ||||||||||| || || ||
Sbjct 33549399 ACCGGGAAGACCATCACCCTTGAGGTGGAGAGCTCGGACACCATCGACAATGTAAAGGCC 33549340
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|||||||||||||| || || || || |||||||||||| | || ||||| || || ||
Sbjct 33549339 AAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAGCAAAGGCTCATCTTTGCTGGCAAG 33549280
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||||| || ||||| | || || || ||||| ||| | || || || || || || ||
Sbjct 33549279 CAGCTTGAGGATGGCCGCACCCTGGCAGATTACAACATTCAGAAGGAGTCTACCCTTCAC 33549220
Query 178125 CTTGTTTTGAGACTCAG 178141
||||| ||||||| ||
Sbjct 33549219 CTTGTGCTGAGACTTAG 33549203
Score = 114 bits (126), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || ||||| || ||||| || || |||||||||||||||||||| || |||
Sbjct 11332184 CAAATCTTTGTGAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCGTCGGAC 11332125
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||| ||||| | || | |||| ||||||||||
Sbjct 11332124 ACGATCGACAACGTGAAGGCTAAGATCCAGGAGGAGGAGGACATCCAGCCGGACCAGCCG 11332065
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || |||| || || | || || ||||| || ||| ||
Sbjct 11332064 CGTATCATCTTCGCGGG----GAGATCGAGGACGGCCGCACGCTCGCCGACTACAACATC 11332009
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 11332008 CAGAAGGAGTCCACCCTCCACCTTGT 11331983
>seq2
Length=22054697
Score = 107 bits (118), Expect = 5e-18
Identities = 134/184 (73%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 177934 TGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGA 177993
|||| | |||||| || || | ||||| | || |||||||||| ||||||||||| |
Sbjct 17986968 TGAAGATTCTCACCGGCAAGATCATCACGGTTGATATGGAAAGCTCTGACACCATCGATA 17986909
Query 177994 ACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCT 178053
|| |||| |||| || || ||||| |||||| | ||||| || ||||| ||||
Sbjct 17986908 ACCTCAAGGCCGAGATCCAAAACGTGGAAGGCATCCCTACCGACCAACAGCGACTCATCT 17986849
Query 178054 TCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAAT 178113
|| |||| || |||||||| || || | ||||| ||||| || | |||| || || |
Sbjct 17986848 TCTCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCGCCGACTACAGGATCCAGAAGGAGT 17986789
Query 178114 CAAC 178117
| ||
Sbjct 17986788 CCAC 17986785
>seq10
Length=33665772
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||| | || |||||||| || || || |||||||| || || ||| || ||
Sbjct 14516244 CAAATATTCATTAAGACTCTCACCGGCAAGACCATCACCCTTGAAGTTGAATCTTCCGAT 14516185
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || ||||| || ||||| || || || ||||||||||||
Sbjct 14516184 ACTATTGATAATGTGAAAGCTAAAATTCAAGATAAAGAGGGTATTCCACCGGACCAGCAA 14516125
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| || || ||||| | || ||||| | || ||||| || || || ||
Sbjct 14516124 AGGTTAATCTTTGCTGGGAAACAATTAGAGGATGGTCGCACCCTTGCGGACTACAATATC 14516065
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 14516064 CAGAAGGAGTCCACCCTCCACCTGGT 14516039
>seq2973
Length=40044
Score = 104 bits (114), Expect = 6e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 177993 AACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATC 178052
||||| ||| ||||||||| ||||| || || ||||| |||||||||||| | || |||
Sbjct 14807 AACGTGAAAGCAAAGATTCAAGACAAGGAGGGGATCCCGCCGGACCAGCAAAGGCTAATC 14866
Query 178053 TTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112
|||||||| |||||||| || || || | || ||||| || || ||| | || || ||
Sbjct 14867 TTCGCCGGGAAACAGCTGGAGGACGGCCGTACGCTTGCGGACTACAACATACAGAAGGAG 14926
Query 178113 TCAACACTGCATCTTGT 178129
|| || || || || ||
Sbjct 14927 TCGACTCTCCACCTAGT 14943
Score = 86.0 bits (94), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 12/146 (8%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| || || || || || || ||||| || |||| |||
Sbjct 39219 CAGATCTTCGTGAAGACCCTCACGGGGAAGACCATTACTCTGGAGGTTGAGAGCTGGGAC 39278
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| ||| ||||||||| ||| || || |||| |||||
Sbjct 39279 ACTATAGACAACGTGAAAGCAAAGATTCAAGAC---GAGGGGATCC---------AGCAA 39326
Query 178044 CGACTTATCTTCGCCGGAAAACAGCT 178069
| || ||||||||||| ||||||||
Sbjct 39327 AGGCTAATCTTCGCCGGGAAACAGCT 39352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203619245851246
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |