Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq11 178 1e-39
seq8 165 8e-36
seq3 152 5e-32
seq1 150 2e-31
seq1007 143 2e-29
seq9 123 2e-23
seq6 114 1e-20
seq4576 100 3e-16
seq2 98.7 9e-16
seq5 93.3 4e-14
>seq11
Length=25514024
Score = 178 bits (196), Expect = 1e-39
Identities = 179/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||||||||| || || | |||||| || || || ||||||||| |||||||||||||
Sbjct 15140709 CGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCGG 15140768
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
||||||||| |||| || |||||||| |||||||| || |||||||| ||||||| |
Sbjct 15140769 CGAGGGTGCGGCCGTCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 15140828
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
| | || |||||||||| ||| || |||| ||| | | | ||||| |||||||
Sbjct 15140829 GGATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTGTCGATCGTGTCCGACGACTCC 15140887
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| | || ||||| || ||||||| ||||| ||||| ||||||||
Sbjct 15140888 ACCTCAAGGGTGATCGTCTTCCCCGTCAAAGTCTTCACGAAGATCTGCAT 15140937
Score = 98.7 bits (108), Expect = 9e-16
Identities = 152/213 (71%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| || || || ||| ||||||||| ||||| ||||| | || || || |||| |||
Sbjct 16241433 ACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTACGGCCGTCCTCG 16241492
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||||||||| || || || || | || ||||||| |||| || ||||||||| ||
Sbjct 16241493 AGCTGCTTGCCCGCAAAGATGAGCCTTTGCTGGTCCGGTGGAATGCCTTCCTTGTCC-TG 16241551
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGT 41829
| | || || | ||| | | | ||||| ||| ||| || || | || |||||
Sbjct 16241552 AATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCT---CTCGACTTCGAGGGTGATCGT 16241608
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || |||||||| || || ||||||||
Sbjct 16241609 CTTCCCGGTGAGCGTCTTCACAAAGATCTGCAT 16241641
>seq8
Length=35439739
Score = 165 bits (182), Expect = 8e-36
Identities = 179/235 (76%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|||||||| || || | || || || |||||| ||||||||||||||| ||||||| |
Sbjct 26900809 CCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGCG 26900868
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || | || || |||||||| |||||||| || || ||||| || |||| ||
Sbjct 26900869 AGGGTTCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGCGGG 26900928
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| | || || | ||| | | | ||||| ||| |||||
Sbjct 26900929 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTCACGTTGTCAATCGTGTCCGACGATTCCAC 26900987
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCG 41869
||| | || ||||| || |||||||||||||| ||||| |||||||| || |||
Sbjct 26900988 CTCGAGGGTGATCGTCTTCCCCGTCAGCGTCTTCACGAAGATCTGCATCTTGTCG 26901042
Score = 147 bits (162), Expect = 2e-30
Identities = 176/234 (75%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||||||||| || || | || || || || ||| ||||||||| ||||| |||||||
Sbjct 32122460 CGCCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 32122401
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCG 41752
||||||||| |||| ||||||||||| |||||||| || || | ||| |||||| |||
Sbjct 32122400 CGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGCG 32122341
Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811
||| | || ||||||||| || | || || | ||| | | ||||| |||||
Sbjct 32122340 GGATCCCT-TCCTTGTCC-TGGATCTTGGCCTTGACGTTATCGATCGTGTCCGAGGACTC 32122283
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||||| | || || || || ||||| || ||||| ||||| |||||||| ||
Sbjct 32122282 CACCTCGAGGGTGATTGTCTTCCCCGTAAGGGTCTTCACGAAGATCTGCATCTT 32122229
Score = 132 bits (146), Expect = 4e-26
Identities = 171/232 (74%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || || || | |||||| || || ||| |||||||||||| || || ||||
Sbjct 1222059 GCCACCACGGAGGCGGAGCACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCGGC 1222118
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||||| |||| |||||||||||||| || || || || | ||| ||||||| ||
Sbjct 1222119 CAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGTGG 1222178
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810
|| | |||||||||| || | ||||| | |||| | | | ||||| ||| ||
Sbjct 1222179 AATACCCTCCTTGTCC-TGGATCTTTGCCTTAACGTTGTCGATCGTGTCAGAGCT---CT 1222234
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||||| || || || || || || || ||||| ||||| ||||||||
Sbjct 1222235 CAACCTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 1222286
Score = 127 bits (140), Expect = 2e-24
Identities = 159/214 (74%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||||||||| || ||| ||||||||||||||||||||||| | |||||| | || ||
Sbjct 1222305 CACCAGATGAAGGGTGGACTCCTTCTGAATGTTATAGTCGGCCAAGGTGCGGCCATCCTC 1222364
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
||||||||||||||| || || || | ||| ||||||| || | || |||||||||| |
Sbjct 1222365 GAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC-T 1222423
Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCG 41828
| | || || | |||| | | | ||||| ||| ||| ||||| | || || |
Sbjct 1222424 GGATCTTGGCCTTAACGTTGTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATGG 1222480
Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || || || || ||||| || || ||||||||
Sbjct 1222481 TCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 1222514
Score = 127 bits (140), Expect = 2e-24
Identities = 114/143 (80%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || ||||| || | ||| || || || ||| |||||||||||||||||||||||
Sbjct 1222516 CCACCACGTAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCC 1222575
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || |||||||||||||||||||| ||||| | ||||||||||| ||
Sbjct 1222576 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGTTGGTCCGGAGGG 1222635
Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778
| || |||||||||| ||| ||
Sbjct 1222636 ATGCCCTCCTTGTCCTGGATCTT 1222658
Score = 123 bits (136), Expect = 2e-23
Identities = 169/232 (73%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| || || | || || || || ||| ||||||||||||||| |||||||
Sbjct 4857996 GCCACCGCGGAGCCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGC 4857937
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||| ||||| |||| |||||||||||||| || || || || | || ||||||| |||
Sbjct 4857936 GAGCGTGCGGCCGTCCTCGAGCTGCTTGCCTGCAAAGATGAGCCTTTGCTGGTCCGGGGG 4857877
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810
| || |||||||||| || | || || | ||| | | | ||||| ||| |
Sbjct 4857876 GATGCCCTCCTTGTCC-TGGATCTTGGCCTTAACATTGTCGATGGTGTCAGAGCT---TT 4857821
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||||| ||||| || || || || || ||||| || || ||||||||
Sbjct 4857820 CGACCTCCAAGGTTATGGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 4857769
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || ||||| || | ||| || || || ||| |||||||||||||||||||||||
Sbjct 1223231 CCACCACGTAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCC 1223290
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| |||| ||||||||||| || ||||| || || | ||| ||||| | |||
Sbjct 1223291 AAGGTGCGGCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCGGGGGGG 1223350
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||| | || | || || | ||| | | | |||||| || || ||
Sbjct 1223351 ATCCCCTCCTTGT-CTTGGATCTTGGCCTTAACATTGTCGATGGTGTCGGAGGATTCAAC 1223409
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || || || || || || || ||||| ||||||||
Sbjct 1223410 CTCTAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAGATCTGCAT 1223457
Score = 96.9 bits (106), Expect = 3e-15
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| || || | |||||| || || ||| |||||||| ||||| ||||| |
Sbjct 4859264 GCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTGGATTCCTTCTGTATGTTGTAGTCCGC 4859205
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTG 41745
||||||||| |||| ||||||||||| |||||||| || || | ||| ||
Sbjct 4859204 CAGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGCCTCTGCTG 4859154
>seq3
Length=30470407
Score = 152 bits (168), Expect = 5e-32
Identities = 175/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||||||||| || || | || || || || ||| ||||||||| || || ||||| |
Sbjct 5990973 CGCCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCG 5991032
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
|||||||||| | || ||||||||||| ||||| || || |||||||| ||||| | |
Sbjct 5991033 CGAGGGTGCGCCCATCCTCGAGCTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGCG 5991092
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
| | || |||||| ||| ||| || |||| ||| | | | ||||| |||||||
Sbjct 5991093 GGATGCCCTCCTTATCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCCGACGACTCC 5991151
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| | || ||||| || ||||| || ||||| ||||| |||||||| ||
Sbjct 5991152 ACCTCGAGGGTGATCGTCTTCCCCGTGAGAGTCTTCACGAAGATCTGCATCTT 5991204
>seq1
Length=27573629
Score = 150 bits (166), Expect = 2e-31
Identities = 177/234 (76%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||| || || || || | || || || || ||| ||||||||| ||||| ||||| |
Sbjct 19376094 CGCCCCCACGAAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTG 19376153
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCG 41752
|||||||||| |||| ||||||||||| ||||| ||||| |||||||| |||||| |||
Sbjct 19376154 CGAGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCAAATATGAGGCGCTGCTGGTCCGGCG 19376213
Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811
||| | | |||||||||| || | || || | ||| | | | ||||| |||||
Sbjct 19376214 GGATC-CCCTCCTTGTCC-TGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAAGACTC 19376271
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||||| | || ||||| || || || || ||||| ||||| |||||||| ||
Sbjct 19376272 CACCTCGAGGGTGATCGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATCTT 19376325
>seq1007
Length=1704909
Score = 143 bits (158), Expect = 2e-29
Identities = 173/233 (74%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||||||||| || || | || || || || ||| ||||||||| ||||| |||||||
Sbjct 32299 CGCCGCCGCGCAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 32358
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
||||||||| |||| ||||||||||| |||||||| || || ||||| |||||| |
Sbjct 32359 CGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCTGAG 32418
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
||| | ||||||||| || | || || | ||| | | | | ||| ||||||
Sbjct 32419 GAATCCCTTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGCGTCCGATGACTCC 32477
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| | || ||||| || || || || ||||| ||||| |||||||| ||
Sbjct 32478 ACCTCGAGGGTAATCGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATCTT 32530
>seq9
Length=34148863
Score = 123 bits (136), Expect = 2e-23
Identities = 169/232 (73%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| || || | |||||| || || ||| |||||||||||||| || || |
Sbjct 33548969 CCCCCGCGGAGGCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 33549028
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||||||| |||| || |||||||| || || || ||||| | ||| || |||| |||
Sbjct 33549029 AGGGTGCGCCCGTCCTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCCGGTGGA 33549088
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGA---CTC 41811
| | |||||||||| ||| ||| ||| | | | | | ||||| ||| |||
Sbjct 33549089 ATCCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCA-ATCGTGTC---CGAACTCTC 33549144
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||||| || || || || || || |||||||| || || |||||||||
Sbjct 33549145 CACCTCCAAGGTAATGGTCTTCCCTGTGAGCGTCTTAACAAAGATCTGCATG 33549196
Score = 114 bits (126), Expect = 1e-20
Identities = 167/232 (72%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| || || | |||||| || || ||| |||||||||||||| || || |
Sbjct 33541435 CCACCGCGGAGGCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 33541376
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || |||||||| || ||||| || || | ||| || |||| |||
Sbjct 33541375 AGGGTGCGGCCGTCCTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGTGGA 33541316
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| | |||||||||| || | || || | ||| | | | ||||| ||| |||
Sbjct 33541315 ATCCCCTCCTTGTCC-TGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAGCT---CTC 33541260
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||||| || || || || || || || ||||| || || |||||||||
Sbjct 33541259 CACCTCCAAGGTAATGGTCTTCCCGGTGAGGGTCTTAACAAAGATCTGCATG 33541208
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|||||||| || || | || || || || ||| ||||||||| ||||| ||||||| |
Sbjct 11331965 CCGCCGCGGAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 11332024
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| |||| || | | ||||| || | ||| | ||||||| |
Sbjct 11332025 AGCGTGCGGCCGTCCTCGATCTCC----CCGCGAAGATGATACGCGGCTGGTCCGGCTGG 11332080
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||| ||| ||| || ||||| || | | | ||||| |||||||||
Sbjct 11332081 ATGTCCTCCTCCTCCTGGATCTTAGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCCAC 11332139
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||| | || ||||| || ||||| || ||||| || || || ||||| ||
Sbjct 11332140 CTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTCACAAAGATTTGCATCTT 11332190
Score = 82.4 bits (90), Expect = 7e-11
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||| || || || || ||||||||||||||| || || | |||||||| | || ||
Sbjct 33549214 CACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCTGCCAGGGTGCGGCCATCCTC 33549273
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
||||||||||| || || || || | || ||||||| ||||| | ||||||||||
Sbjct 33549274 AAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCCGGGGGAATACCCTCCTTGTCC 33549331
>seq6
Length=34899179
Score = 114 bits (126), Expect = 1e-20
Identities = 167/232 (72%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| ||||| | ||||| || || ||| |||||||| ||||||||||| |
Sbjct 13154771 GCCACCGCGGAGACGAAGGACCAGGTGAAGAGTGGATTCCTTCTGGATGTTATAGTCTGC 13154712
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| |||||| | || ||||||||||| || || || || || | ||||||||| | ||
Sbjct 13154711 CAGTGTGCGCCCATCCTCGAGCTGCTTACCCGCAAAGATTAGCCTCTGTTGGTCTGGTGG 13154652
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810
| | |||||||||| || | ||||| | || | | | |||||| ||| ||
Sbjct 13154651 GATTCCCTCCTTGTCC-TGTATCTTTGCCTTCACATTGTCGATAGTGTCCGAGCT---CT 13154596
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||||| || || || || ||||| || || || || ||||| |||||
Sbjct 13154595 CAACCTCCAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACAAAAATTTGCAT 13154544
>seq4576
Length=2771
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| ||||| | || || || ||||| ||| ||||| ||||| ||||| |
Sbjct 2718 GCCACCGCGGAGACGGAGGACGAGGTGGAGCGTCGACTCTTTCTGGATGTTGTAGTCCGC 2659
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || | || |||||||||||||| ||||| || || | || ||||| | ||
Sbjct 2658 AAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATGAGCCTTTGCTGGTCGGGAGG 2599
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || ||| |||||| || | || |||| ||| | | | |||||| || |
Sbjct 2598 GATGCCCTCTTTGTCC-TGGATCTTAGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCGA 2540
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || ||||| || || |||||||| || || ||||||||
Sbjct 2539 CCTCGAGGGTGATGGTTTTTCCAGTGAGCGTCTTAACAAAGATCTGCAT 2491
>seq2
Length=22054697
Score = 98.7 bits (108), Expect = 9e-16
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| || || | |||||| ||||| ||||||||| || | |||||||
Sbjct 17986754 GCCGCCGCGGAGTCGAAGGACCAGAAAGTGCGTGGACTCCTTCTGGATCCTGTAGTCGGC 17986813
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748
||| ||||| |||| |||||||||||||||| ||| || || |||||||||||
Sbjct 17986814 GAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGAGAAGATGAGTCGCTGTTGGTC 17986867
>seq5
Length=29377369
Score = 93.3 bits (102), Expect = 4e-14
Identities = 162/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || || || | ||||| || || ||| |||||||||||| | ||||||
Sbjct 457983 GCCACCACGGAGTCGGAGAACCAGGTGAAGAGTGGATTCCTTCTGAATGCTGTAGTCGTC 457924
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| ||||| | || |||||||| || ||||| || || || | ||| || |||| |
Sbjct 457923 CAGAGTGCGGCCATCCTCGAGCTGTTTCCCGGCAAAGATGAGCCTCTGCTGATCCGGTGA 457864
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810
| || |||||||| |||| | ||||||| || | | | ||||| ||| ||
Sbjct 457863 GATGCCCTCCTTGT-CATGGATCTTTGCTTTAAGATTGGCGATCGTGTCTGAGCT---CT 457808
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||||| || || || || || || || || || || ||||| |||||
Sbjct 457807 CCACCTCCAGGGTGATGGTGTTTCCGGTGAGGGTTTTGACAAAAATTTGCAT 457756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462262051690800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |