Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20itinerans_20[genbank_20GCA_5F001649415.1_202016-05-21] 28,415 sequences; 455,349,267 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq125 82.4 8e-11 >seq125 Length=520858 Score = 82.4 bits (90), Expect = 8e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || |||||||||||||| || || ||||| | | |||||| ||||| || || || Sbjct 302535 AGGCAAGCGAAGTCGCAATGAAGGCCCTCGTCACGGGAGATAAGCTCGTTCGAGAAGGTG 302594 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | ||| ||||| || || ||||| | ||| || || || ||| || || || || || Sbjct 302595 AGCCCCGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATAGC-GCAGAAGGAGCCAGAGAA 302653 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGC 16359 ||| || ||||| ||| | || || |||| | ||| || || Sbjct 302654 GAAGATTCCCTCGACACAGGCGAAGGCGACAATTCGCTCGGC 302695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511232751997800