Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20itinerans_20[genbank_20GCA_5F001649415.1_202016-05-21] 28,415 sequences; 455,349,267 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq299 82.4 6e-11 >seq299 Length=319228 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || ||||||| | || || || ||||| ||| || || | | Sbjct 261719 ATGCAAATTTTTGTCAAAACCCTCACCGGGAAGACCATCACCCTTGAGGTTGAGAGCTCG 261778 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || ||||| || || || || ||||| | ||| ||| || Sbjct 261779 GACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 261838 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||||| || |||||||| ||||| |||||||| ||| | || |||| || || ||| Sbjct 261839 CAAAGGCTCATCTTTGCTGGCAAGCAATTGGAGGATGGCCGCACCTTGGCTGACTATAAT 261898 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 || || ||||||||||| || ||| ||||| Sbjct 261899 ATCCAGAAGGAATCTACCCTCCACTTGGTG 261928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410654537858810