Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20itinerans_20[genbank_20GCA_5F001649415.1_202016-05-21] 28,415 sequences; 455,349,267 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq83 168 6e-37 seq202 159 3e-34 seq1710 116 3e-21 seq1530 111 1e-19 seq403 104 2e-17 seq299 93.3 4e-14 seq1066 91.5 1e-13 seq16 91.5 1e-13 seq388 87.8 2e-12 seq33 87.8 2e-12 seq540 86.0 6e-12 seq262 82.4 7e-11 >seq83 Length=609517 Score = 168 bits (186), Expect = 6e-37 Identities = 404/605 (67%), Gaps = 7/605 (1%) Strand=Plus/Plus Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||| |||||||| || || |||||| | | || | Sbjct 416244 CACGTCCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTCGTCGAGAACCTCGCCGCGCGC 416303 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || | || || || | | ||||| | ||| ||||| || || | ||||| Sbjct 416304 TTCATGCGCGACGTCCAGCTCCCCGAGGCCCGCGCCTTCTACGGGTTCCAGATCGCCATC 416363 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || ||||| || || ||| |||| || ||||| |||||| |||| Sbjct 416364 GAGAACATCCACTCCGAGATGTACTCCCTCCTCCTCGACACCTACGTCAAGGACCCCGAC 416423 Query 57867 GAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAG 57926 || || | | || ||| |||| ||||| || | ||||| ||||| ||||| || Sbjct 416424 GACAAGTATCGCCTCTTCCACGCCATCGATACCGTCCCCGCCGTCGCCCGAAAGGCCGAC 416483 Query 57927 TGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTC 57986 ||| | | ||||| | | || | | | ||||||||| | || | || ||| Sbjct 416484 TGGGCCCTTCGCTGGATCGATTCCTCC---GGCTCCTTCGCCGAGCGCCTCGTTGCCTTC 416540 Query 57987 GCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAA 58045 ||| |||||| || || ||||| || ||| ||| |||| | || || ||| | ||||| Sbjct 416541 GCCTGCGTCGAGGGCATCTTCTTCTCCGGCTCCTTCTGCG-CTATCTTCTGGCTCAAGAA 416599 Query 58046 ACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCT 58105 ||||||||| ||||||||||| || || |||||| | || || ||||||||||| || Sbjct 416600 ACGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAACTCATCTCCCGCGACGAGGGCCT 416659 Query 58106 CCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG-ACGCGGGATC 58164 ||| || || || ||||| | ||| | | | ||| || | | || || | | Sbjct 416660 CCACTGCGACTTCGCCTGCCTCCTCTACAGCCTCCTCCGCAACAAGCTGTCCGAGGAAGC 416719 Query 58165 GCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCC 58224 | || || || | | || || || | |||||| ||||| ||| ||| || | Sbjct 416720 G-GTCCGGGCAATCGTTGCGGACGCTGTTGACATCGAACGGGAGTTCGTCTGCGACGCAC 416778 Query 58225 TACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTG 58284 | || || || | |||| |||||| |||| | ||| ||||||| ||||| || | Sbjct 416779 TCCCTGTCGCTCTCGTCGGGATGAACGTTGATCTCATGAGCCAGTACATCGAGTTCGTGG 416838 Query 58285 CCGAC 58289 ||||| Sbjct 416839 CCGAC 416843 >seq202 Length=395113 Score = 159 bits (176), Expect = 3e-34 Identities = 302/441 (68%), Gaps = 5/441 (1%) Strand=Plus/Minus Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || ||||| ||||| ||||| || || || |||||| | | || | Sbjct 244477 CACGTCCTCGCCTTTTTTGCCGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCGCCCGC 244418 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || | || || ||| | | ||||| | ||| ||||| || || | || || Sbjct 244417 TTCATGCGCGACGTCCAACTCCCCGAGGCCCGCGCCTTCTACGGTTTCCAGATTGCAATC 244358 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || ||||| || || || ||||||||||| | |||||| |||| Sbjct 244357 GAGAACATCCACTCCGAGATGTACTCCCTTCTACTCGATACGTACATCAAGGACCCCGAC 244298 Query 57867 GAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAG 57926 |||| | | || ||| |||| ||||| | | |||||| ||||| |||||| || Sbjct 244297 CAGAAGTTTCGCCTCTTCCACGCCATCGACAACGTCCCCGCGGTCGCCCGGAAGGCCGAC 244238 Query 57927 TGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTC 57986 ||| | || ||||||| | | | | | | ||||||||| | || |||| ||| Sbjct 244237 TGGGCCCTCCAATGGATTGA---GTCTTCTGGCTCCTTCGCCGAGCGACTCGTCGCCTTC 244181 Query 57987 GCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAA 58045 ||| |||||| || || || || || ||| ||| ||| || || || ||| | ||||| Sbjct 244180 GCCTGCGTCGAGGGCATCTTTTTCTCCGGCTCCTTCTGC-GCCATCTTCTGGCTCAAGAA 244122 Query 58046 ACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCT 58105 |||||||| |||||||| || || || ||||||| | || || || |||||||| || Sbjct 244121 GCGCGGCCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCCT 244062 Query 58106 CCATACTGATTTTGCGTGCCT 58126 || || ||||| ||||| Sbjct 244061 TCACTGCGACTTTGCTTGCCT 244041 >seq1710 Length=60682 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| || ||||| || |||||| |||| || || || Sbjct 25077 ATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 25018 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | ||| ||||||||| ||| | || || |||||| Sbjct 25017 GACACGATCGACAACGTCAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 24958 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||| ||||| ||| | || || || || ||| |||||| Sbjct 24957 CAGAGGCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTATAAC 24898 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || || ||||||||||| || ||||| ||||| || Sbjct 24897 ATTCAGAAGGAGTCCACCCTTCATCTGGTGCTGAGACTCAGGGGAGG 24851 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| || ||||| || |||||| |||| || || || Sbjct 22940 ATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 22999 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | ||| ||||||||| ||| | || || |||||| Sbjct 23000 GACACGATCGACAACGTTAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 23059 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||| ||||| ||| | || || || || ||| |||||| Sbjct 23060 CAGAGGCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTATAAC 23119 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || || ||||||||||| || ||||| ||||| || Sbjct 23120 ATTCAGAAGGAGTCCACCCTTCATCTGGTGCTGAGACTCAGGGGAGG 23166 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || |||||| | || || || || Sbjct 23168 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTGGAGGTCGAGAGCTCT 23227 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | ||||||||| || | || || ||||| Sbjct 23228 GACACGATCGACAACGTCAAGGCAAAGA-TCCAGGACAAGGAGGGTATTCCACCGGACCA 23286 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||| ||||| ||| | || || || || ||| ||||| Sbjct 23287 GCAGAGGCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTATAA 23346 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||| || || || || ||||||||||| || ||||| ||||| || Sbjct 23347 CATTCAGAAGGAGTCCACCCTTCATCTGGTGCTGAGACTCAGGGGAGG 23394 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || ||||| || |||||| | || || ||| | ||| Sbjct 22484 ATGCAGATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTAGAGGTGGAATCCTCC 22543 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||||| || | || ||||||||| Sbjct 22544 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCCCCCGACCAG 22603 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || |||||||| || ||| | |||||| || || ||| || ||| Sbjct 22604 CAGAGGCTCATCTTCGCTGGTAAGCAGCTCGAAGACGGCCGCACCTTGGCCGACTACAAC 22663 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || || || Sbjct 22664 ATTCAGAAGGAGTCCACCCTCCACCTCGTGCT 22695 >seq1530 Length=69702 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||| | ||||| || || || || || |||||| | || |||||| | || Sbjct 25635 ATGCAAATTTTCATCAAGACCCTCACCGGTAAGACCATCACCCTTGAGGTTGAATCTTCT 25576 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||||||| | || || |||||| Sbjct 25575 GACACAATTGATAATGTAAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCAGACCAG 25516 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 ||| | | || || ||||| || ||| | || ||| | || | ||| || ||||| Sbjct 25515 CAGAGGTTGATCTTTGCTGGGAAGCAGCTAGAGGACGGTCGCACCCT-AGCAGACTATAA 25457 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||||||| |||||||| |||||| |||| || || || ||||| || Sbjct 25456 CATTCAAAAGGAATCGACCCTTCATTTGGTTCTCAGGCTTAGGGGAGG 25409 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||| | ||||| || || || || || |||||| | || |||||| | || Sbjct 25863 ATGCAAATTTTCATCAAGACCCTCACCGGTAAGACCATCACCCTTGAGGTTGAATCTTCT 25804 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||||||| | || || |||||| Sbjct 25803 GACACCATTGATAATGTAAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCAGACCAG 25744 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 ||| | | || || ||||| || ||| | || ||| | || | ||| || ||||| Sbjct 25743 CAGAGGTTGATCTTTGCTGGGAAGCAGCTAGAGGACGGTCGCACCCT-AGCAGACTATAA 25685 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| ||||| |||||||| |||||| |||| || || || ||||| || Sbjct 25684 CATCCAAAAGGAATCGACCCTTCATTTGGTGCTCAGGCTTAGGGGAGG 25637 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||| | |||||||| || || || || |||||| | || |||||| | || Sbjct 26091 ATGCAAATTTTCATTAAGACTCTCACCGGTAAGACCATCACCCTTGAGGTTGAATCTTCT 26032 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | | | || | || |||||||||||| | || || |||||| Sbjct 26031 GACACCATTAATAATATAAAGGCTAAGATTCAAGACAAGGAAGGCATCCCCCCAGACCAG 25972 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 ||| | | || || ||||| || ||| | || ||| | || | ||| || ||||| Sbjct 25971 CAGAGGTTGATCTTTGCTGGGAAGCAGCTAGAGGACGGTCGCACCCT-AGCAGACTATAA 25913 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| ||||| |||||||| |||||| |||| || || || ||||| || Sbjct 25912 CATCCAAAAGGAATCGACCCTTCATTTGGTGCTCAGGCTTAGGGGAGG 25865 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||| |||||||||| || ||||| || |||||| | || || ||| | || Sbjct 25407 ATGCAAATTTTCATAAAGACTCTCACCGGCAAGACTATCACCCTTGAGGTCGAATCTTCT 25348 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | ||| ||||| || ||| | || || |||||| Sbjct 25347 GACACCATTGATAATGTAAAGGCCAAAATTCAAGACAAAGAGGGCATTCCCCCAGACCAG 25288 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 || | | ||||| ||||| ||||| || || || | || | ||| || || || Sbjct 25287 CAAAGGTTGATATTTGCTGGGAAACAATTAGAGGATGGTCGCACCCT-AGCAGACTACAA 25229 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || ||||| || |||||| |||| || || || ||||| || Sbjct 25228 TATTCAGAAGGAATCTACCCTTCATTTGGTTCTCAGGCTCAGGGGAGG 25181 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||||| || || || || |||||| | || || ||| | || Sbjct 26319 ATGCAAATTTTCGTTAAAACTCTCACCGGTAAGACCATCACCCTTGAGGTCGAATCTTCT 26260 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||||| || ||| | || || |||||| Sbjct 26259 GACACCATTGATAATGTAAAGGCCAAGATTCAAGACAAAGAGGGCATTCCCCCAGACCAG 26200 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 || | | ||||| ||||| ||||| || || || | || | ||| || || || Sbjct 26199 CAAAGGTTGATATTTGCTGGGAAACAATTAGAGGATGGTCGCACCCT-AGCAGACTACAA 26141 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || ||||| || |||||| |||| || || ||||||| || Sbjct 26140 TATTCAGAAGGAATCTACCCTTCATTTGGTGCTCAGGTTGAGGGGAGG 26093 >seq403 Length=254866 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || || ||||||||| | || || || |||| Sbjct 86071 ATGCAGATCTTCGTGAAGACGTTGACGGGGAAGACGATCACCCTTGAGGTGGAGTCGTCG 86130 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||| ||| | ||||| |||||| Sbjct 86131 GACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 86190 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| || || ||| |||| ||| || | ||| |||||| Sbjct 86191 CAGCGCCTCATCTTCGCCGGGAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTATAAC 86250 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || ||||| || ||||| || Sbjct 86251 ATCCAGAAGGAGTCTACTCTCCACCTGGTGCT 86282 >seq299 Length=319228 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || || ||||| || || || || |||||| | || |||||| | || Sbjct 261034 CATGCAGATTTTTGTCAAAACTCTCACCGGAAAGACCATCACCCTTGAGGTTGAATCCTC 261093 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | ||||| | || ||||||||||||| | || || || || Sbjct 261094 TGACACTATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCA 261153 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||| | || || ||||||||||||||| | || || Sbjct 261154 GCAAAGGCTCATCTTCGCTGGCAAACAGCTCGAGGA 261189 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || || || || || || || || ||||| | || ||||| || Sbjct 262402 CATGCAAATTTTTGTGAAAACCCTCACCGGGAAGACCATCACTCTGGAGGTTGAGAGCTC 262461 Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 || | | |||| | || || || || ||| ||||||||| || | || || |||| Sbjct 262462 GGATACTATCGACAATGTGAAGGCAAAG-ATACAGGACAAGGAGGGAATCCCACCAGACC 262520 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 | ||| | || || || |||||||| || ||||| || || || || |||| Sbjct 262521 AACAGAGGCTGATCTTTGCTGGCAAGCAATTGGAGGATGGGCGCACACTGGCAGACTATA 262580 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||| || || ||||| |||||||| ||||| ||| Sbjct 262581 ACATCCAGAAGGAATCCACTCTTCACCTGGTCCTT 262615 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || || ||||| || || || || |||||| | || |||||| | || Sbjct 260806 CATGCAAATCTTTGTCAAAACTCTCACCGGAAAGACCATCACCCTTGAGGTTGAATCCTC 260865 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| | || ||||||||||||| | || || || || Sbjct 260866 TGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCA 260925 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||| | || || ||||||||||||||| | || || Sbjct 260926 GCAAAGGCTCATCTTCGCTGGCAAACAGCTCGAGGA 260961 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || || ||||| || || || ||||||||| | || ||||| || Sbjct 261490 CATGCAGATTTTTGTCAAAACTCTCACCGGAAAGACGATCACCCTTGAGGTTGAGAGCTC 261549 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | ||||| | ||| ||||||||| ||| | || || || || Sbjct 261550 GGACACTATCGACAATGTCAAGGCCAAGATACAGGACAAGGAGGGCATTCCCCCAGATCA 261609 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||| | || || ||||||||||| ||| | || || Sbjct 261610 GCAAAGGCTCATCTTCGCTGGCAAGCAGCTCGAGGA 261645 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || || || || || || || ||||| | || ||||| || Sbjct 261947 ATGCAAATTTTTGTGAAAACCCTCACTGGGAAGACCATCACTCTGGAGGTTGAGAGCTCG 262006 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | || || || || ||| ||||||||| ||| | || || ||||| Sbjct 262007 GACACTATCGACAATGTGAAGGCAAAG-ATACAGGACAAGGAGGGCATTCCTCCAGACCA 262065 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | || || || |||||||| || ||||| || || || || ||||| Sbjct 262066 GCAAAGGCTCATCTTTGCTGGCAAGCAATTGGAGGATGGCCGCACCTTGGCTGACTATAA 262125 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || ||||| || || || |||| || || || ||||| || Sbjct 262126 TATCCAGAAGGAATCTACCCTCCACTTGGTGCTGAGGCTCAGGGGAGG 262173 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || || || || || || || || |||||| | || ||||| || Sbjct 261718 CATGCAAATTTTTGTCAAAACCCTCACCGGGAAGACCATCACCCTTGAGGTTGAGAGCTC 261777 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| | || ||||||||||||| | || || ||||| Sbjct 261778 GGACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCA 261837 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | || || || |||||||| || ||||| || || || || ||||| Sbjct 261838 GCAAAGGCTCATCTTTGCTGGCAAGCAATTGGAGGATGGCCGCACCTTGGCTGACTATAA 261897 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || ||||| || || || |||| || || || ||||| || Sbjct 261898 TATCCAGAAGGAATCTACCCTCCACTTGGTGCTGAGGCTCAGGGGAGG 261945 >seq1066 Length=105919 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| ||||| || || ||||||||| |||| || ||| || Sbjct 79442 AAGATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACCCTCGAGGTGGAATCG 79501 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | || | || || | || ||||||||| ||| | ||||| || Sbjct 79502 TCGGACACGATTGACAACGTGAAGGCCAAGATTCAGGACAAGGAGGGCATCCCGCCGGAT 79561 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||||| || ||||| || || ||| | || || Sbjct 79562 CAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGA 79599 >seq16 Length=1017178 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| |||||||| || || || ||||||||| | || || || || Sbjct 913448 AAGATGCAGATCTTCGTGAAGACTCTCACGGGGAAGACGATCACCCTAGAGGTCGAGTCG 913389 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | || || | || ||| ||||| ||| | ||||| ||| Sbjct 913388 TCGGACACCATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCGCCTGAC 913329 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| || || ||| | || ||| || | ||| ||| Sbjct 913328 CAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTAT 913269 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || ||||| || || || || Sbjct 913268 AACATCCAGAAGGAGTCCACTCTCCACCTCGTCCT 913234 >seq388 Length=261907 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || ||||||||| |||| || || || Sbjct 215097 ATGCAGATCTTCGTCAAGACTCTTACCGGGAAGACGATCACCCTCGAGGTCGAGAGCTCG 215156 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||||||| | || || |||||| Sbjct 215157 GACACCATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCCCCGGACCAG 215216 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || || || || || ||||| ||| | || ||| || | || |||||| Sbjct 215217 CAACGGCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCTGACTATAAC 215276 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || ||||| || || || || || || || ||| Sbjct 215277 ATCCAAAAGGAGTCCACCCTCCACCTCGTCCTT 215309 >seq33 Length=860167 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| ||||| || || || || || |||||| |||| || || | Sbjct 78606 AAAGATGCAGATCTTCGTGAAGACCCTTACGGGGAAGACAATCACCCTCGAGGTGGAGTC 78665 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| |||| | ||||| | || |||||||||||| | ||||| || Sbjct 78666 CTCGGACACCATCGATAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCGCCGGA 78725 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| || || ||||| || || ||| | || ||| ||| | ||| || Sbjct 78726 CCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTCGAGGACGGCCGCACTCTCGCCGACTA 78785 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || || || || Sbjct 78786 CAACATCCAGAAGGAGTCCACCCTCCACCTCGTCCT 78821 >seq540 Length=201599 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| || || || || || |||||| |||| || || | Sbjct 110216 AAGATGCAGATCTTCGTGAAGACCCTCACCGGGAAGACTATCACCCTCGAGGTGGAGTCT 110157 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | ||||| || || ||||||||| || | ||||| ||| Sbjct 110156 TCGGACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCGGAC 110097 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || || || || || ||| | || ||| ||| | ||| || Sbjct 110096 CAGCAGCGCCTCATCTTTGCCGGGAAGCAGCTCGAGGACGGGCGCACTCTCGCCGACTAC 110037 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || ||||| || || || Sbjct 110036 AACATCCAGAAGGAGTCCACCCTTCACCTCGTCCT 110002 >seq262 Length=346991 Score = 82.4 bits (90), Expect = 7e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 23789 GACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCG 23848 |||| |||| ||| || | ||| | | |||||||| ||| ||| || || | || Sbjct 236936 GACAACAGATGGTATGTTCCAATGACAGAGTCAATGTCATCTTTGTGGATTCCAACAGCT 236995 Query 23849 ACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATAT 23908 || | ||||| ||||| ||| || ||||| || ||| || ||| || ||||| Sbjct 236996 ACTCTCATCAACATGTGTTGTGGCCTCTCCACTACCTTGCCACAAACTTTTAAGAGATAC 237055 Query 23909 GAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATC 23958 || | | | ||||||||||||||||| ||||||| |||||| ||||| Sbjct 237056 GACCTCTCAAGAGTTTTAAATCCAAAATAATCATAGTCAAAGTCTCGATC 237105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445608069346800