Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20itinerans_20[genbank_20GCA_5F001649415.1_202016-05-21] 28,415 sequences; 455,349,267 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2486 264 8e-65 seq148 244 8e-59 seq121 210 2e-48 seq149 143 2e-28 seq218 138 8e-27 seq1739 122 7e-22 seq304 120 2e-21 seq297 113 3e-19 seq623 109 4e-18 seq436 107 1e-17 seq236 105 5e-17 seq1381 102 6e-16 seq228 100 2e-15 seq185 100 2e-15 seq81 91.5 1e-12 seq405 89.7 4e-12 seq78 86.0 5e-11 >seq2486 Length=35297 Score = 264 bits (292), Expect = 8e-65 Identities = 702/1061 (66%), Gaps = 16/1061 (2%) Strand=Plus/Minus Query 281424 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 281483 |||||| ||| || | |||||||||||||| | ||||| ||| || ||||| | Sbjct 23728 CGGCAGACACGTTCAAGATACCATTGGCATCAATGTCAAAGCAAACTGTGATCTGAGGAA 23669 Query 281484 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 281543 | || || |||||||||| || || | | |||| | || || ||| |||||| Sbjct 23668 CACCCCTTGGAGCAGGTGGAATACCAGAGAGCTCAAATTTGCCTAGGAGATTGTTATCTC 23609 Query 281544 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAAT 281603 | || | | |||||||| ||| ||||| || ||| || ||||| |||| Sbjct 23608 TCGTCCTAGTCCTCTCACCCTCATAAACCTGGATCAAGACACCAGGCTGGTTATCAGAAT 23549 Query 281604 AAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 281662 | || | || || ||| ||| || ||| || || ||||| || || | | Sbjct 23548 ATGTCGAGAAGAC-CTGCTCTTTCTTTGTAGGGATAGTGGTGTTCCTCGGGATTAAAACA 23490 Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | || |||||||| || | ||||||||| || || |||||||| | || | Sbjct 23489 GTCATTACTCCTCCAGCTGTCTCCAGACCAAGAGAGAGCGGTGTGACATCCAAAAGAAGT 23430 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | | || | || |||| | ||| || || || || |||| |||||||||| Sbjct 23429 AGGTCCTGCACCTTCTCATTGCCCTCCCCACTGAGTATGGCAGCCTGAACAGCAGCACCA 23370 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT- 281841 || |||||||| ||||| ||||||| | ||| | | || |||||||| || | Sbjct 23369 TAAGCAACAGCCTCATCCGGATTAATACTTTTGCACAACTCCTTTCCATTGAAGAAGTCC 23310 Query 281842 TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 281901 || |||| |||| ||||| ||||| | | || || ||||| | |||| || || Sbjct 23309 TGCAAGA-GTTGCTGAACCTTTGGAATTCTGGTGGACCCACCAACAAGGACAACATCGTG 23251 Query 281902 CACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAG 281960 || || | || |||| |||| |||| | | || || || ||||| | | Sbjct 23250 GACAC-TGCTCTTGTCCATCTTTGCATCCCTCAGACACTTCTCGACAGGTTCCATGCACT 23192 Query 281961 CTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAAT 282020 || |||| ||| ||| ||||| || | |||||||||| ||| | ||| Sbjct 23191 TCCTGAACAGGTCCATGTTAAGCTCTTCAAACCTCGCTCTAGTAATGGTGGAGTAGAAAT 23132 Query 282021 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 282080 |||| || ||| |||| ||||||| || || |||||||||| | ||||| | | | Sbjct 23131 CAATGCCCTCGTACAAGGAATCAATCTCGATTGTAGTTTGAGCAGTGGAAGACAAGGTCC 23072 Query 282081 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAAT 282140 || || | ||| ||||||||||| | || | | || | | | | | | || Sbjct 23071 TCTTTGCTCTTTCGCATGCTGTCCTCAACCTCCTGAGAGCCCTAGGGTTTCCACTTATAT 23012 Query 282141 CTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAA 282198 || | || | ||||||||||| || | ||| | ||| | || | |||||| ||||| Sbjct 23011 CTTTCTTGTTCTTTCTCTTGAATTCCTGGACAAA--ATGGTTGACCATACGATTGTCAAA 22954 Query 282199 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 282258 ||| ||||| || | | || | || | ||||| | || | |||| || ||||| Sbjct 22953 ATCCTCACCGCCGAGGTGGGTGTCACCGGCGGTAGCCTTCACCTCAAAAATACCCTCTTC 22894 Query 282259 AAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 282318 || | || ||||| |||||| || |||||||| | ||||| || || |||||| | Sbjct 22893 AATGGTCAGAAGAGAGACATCAAAAGTGCCACCACCAAGGTCAAAGATGAGGACATTCTT 22834 Query 282319 TTCTTTGTCT----TGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 || | | | || || || |||||||| |||| ||||||||| ||||| || Sbjct 22833 CTCCCCAACACTACTAGCCTTCTTGTCGAGACCATAGGCAATAGCAGCAGCTGTTGGCTC 22774 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 || ||||| |||| ||||||||||||||||| || || ||||| || || || | Sbjct 22773 GTTGATAATCCTCATTACATTAAGACCAGCAATGACACCAGCGTCTTTCGTTGCCTGGCG 22714 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 || || || ||||| || ||||||||||||| ||| |||| Sbjct 22713 CTGGGAGTCATTAAAGTAAGCAGGAACAGTAACAACAGCAT 22673 >seq148 Length=483576 Score = 244 bits (270), Expect = 8e-59 Identities = 558/826 (68%), Gaps = 24/826 (3%) Strand=Plus/Plus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | || || || || || | ||||||||| ||||| |||||||| | || | Sbjct 35061 GTCATGACTCCTCCGGCGGTCTCCAGACCAAGAGAGAGAGGCGTGACATCCAACAGAAGC 35120 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | | |||| || |||| | ||| |||||| || || |||| |||||||||| Sbjct 35121 AGGTCCTGAACCTTCTCATTGCCCTCACCGCTAAGAATTGCAGCCTGAACAGCAGCACCA 35180 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 || ||||| || || || ||||||| | ||| ||| | |||||||||||||| | Sbjct 35181 TAAGCAACTGCCTCGTCGGGATTAATACTTTTGCATAGCTCCTTACCATTGAAAAAGTCC 35240 Query 281843 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902 |||||||| ||||| ||||| | | || || ||||| | || | |||| Sbjct 35241 TGCAGAAGTTGCTGAACCTTTGGAATTCTGGTAGACCCACCAACAAGAACCACATCATCG 35300 Query 281903 ACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGC 281961 || || | || |||| || | |||| ||| || || || || || | | Sbjct 35301 ACAC-TGCTCTTGTCCATCTTGGCATCCCTCAAACACTTCTCGACAGGATCCATGCACTT 35359 Query 281962 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 282021 || |||| ||| ||| ||||| || | ||||| || | ||| | |||| Sbjct 35360 CCTGAACAGGTCCATGTTAAGCTCTTCAAACCTGGCTCTGGTGATGGTGGTGTAGAAATC 35419 Query 282022 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG---AGTCGAAGAAGATAGTGC 282078 || || ||| |||| ||||||| ||||| || ||||| ||| || || || ||| | Sbjct 35420 AACACCCTCGTACAAGGAATCAATCTCAATTGTGGTTTGTGCAGTGGAGGA-GAGAGTCC 35478 Query 282079 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTG--ATT 282135 | || || | |||||||||||||| | |||| |||| ||| | | | || | | Sbjct 35479 TCTTT--GCCCTCTCACATGCTGTCCTCAACCTTC-TAAGAGCTCTAG--GGTTCCCACT 35533 Query 282136 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTA 282193 | |||| | || | |||||||| || |||| ||| | ||| | || | || || Sbjct 35534 TATATCTTTCTTGTGCTTTCTCTTAAACTCTTGGACAAA--ATGGTTGACCATTCGGTTG 35591 Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 |||||||| ||||| || | | ||||| || | ||||| | || | |||| || Sbjct 35592 TCAAAATCCTCACCACCAAGGTGAGTATCACCAGCAGTAGCCTTGACCTCAAAAATACCT 35651 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 ||||| | | | ||||| |||||| ||| |||||||| | ||||| || || ||| Sbjct 35652 TCTTCGATTGTAAGAAGAGAGACATCAAAGGTGCCACCACCAAGGTCAAAGATGAGGACA 35711 Query 282314 TTCATTTCTTTGTCT----TGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367 ||| | || | | | || || ||||||||||| || | ||||||||||| Sbjct 35712 TTCTTCTCACCAACACTACTAGCCTTCTTGTCAAGACCATAAGCGATGGCAGCAGCAGTG 35771 Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 || ||||| ||||| |||| |||||||||||||| ||| || |||||||||||||| Sbjct 35772 GGCTCATTGATAATCCTCATAACATTAAGACCAGAAATGACACCAGCATCTTTAGTGGCC 35831 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 || | ||||| || ||||| || ||||||||||| | ||| |||| Sbjct 35832 TGGCGCTGTGAGTCATTAAAGTAAGCAGGAACAGTGACAACAGCAT 35877 >seq121 Length=525214 Score = 210 bits (232), Expect = 2e-48 Identities = 697/1065 (65%), Gaps = 28/1065 (3%) Strand=Plus/Minus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| ||||| | ||||| ||||| || | || || || || ||||||||| Sbjct 138865 GCAGAGACATTCAAGATACCGTTGGCGTCAATGTCGAAGCAAACCGTGATCTGAGGGACC 138806 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 || || | |||||||| ||||| | | |||| |||| || ||| || ||| | Sbjct 138805 CCCCTAGGGGCAGGTGGAATCCCAGAGAGCTCAAATTTTCCAAGCAGATTGTTGTCTCTG 138746 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || | | || |||||| ||| ||||| || | | ||| || |||||||| Sbjct 138745 GTCCTGGTCCTCTCTCCCTCGTAAACCTGGATCAAGACACCCGGTTGGTTGTCTGAATAG 138686 Query 281606 GTTGTAAATACTCTGGATTTTTTACAAGG-AATTGTTGTGTTTCTATCAATAATATTGGT 281664 || | || || ||| || | | || ||| || ||||| || ||| | ||| Sbjct 138685 GTAGAGAACAC-CTGTTCCTTCTTCGTGGGAATGGTAGTGTTCCTGGGAATTAAGACGGT 138627 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||||| || ||||| || || | |||||||||||||||||||||||| | || | | Sbjct 138626 CATAACTCCTCCAGCAGTCTCCAGACCAAGAGAAAGAGGAGTGACATCCAACAGAAGCAG 138567 Query 281725 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 281784 | ||| | || || | | | ||| ||||||||| || |||| ||||||||| || Sbjct 138566 GTCTTGCACCTTCTCGTTACCCTCACCGCTAAGAATAGCAGCCTGAACAGCAGCACCGTA 138507 Query 281785 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTG 281843 ||||| || ||||||||||| | ||| || | || || ||||| || | || Sbjct 138506 GGCAACTGCCTCATCAGGATTGATGCTTTTGCAAAGCTCCTTCCCGTTGAAGAAGTCCTG 138447 Query 281844 AAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA 281903 || || || ||||| || || | | ||||| ||||| | || | ||||| | Sbjct 138446 CAA-CAGCTGCTGAACCTTTGGGATTCTGGTAGATCCACCAACAAGAACCACATCATGGA 138388 Query 281904 CCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT 281962 | ||| | || |||| || | |||| | | || || || || || | || Sbjct 138387 -CAGTGCTCTTGTCCATCTTGGCATCCCTCAGACACTTCTCCACAGGCTCCATACACTTC 138329 Query 281963 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCA 282022 ||||||| ||| || || || || | ||||| |||| ||| | ||||| Sbjct 138328 CTAAACAGGTCCATGTTTAGCTCCTCAAACCTGGCTCTGGTAATGGTGGAGTAGAAATCA 138269 Query 282023 ATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG---AGTCGAAGAAGATAGTGCA 282079 ||||| ||| |||| ||||||| || ||||| ||||| ||| | || ||| ||| | Sbjct 138268 ATTCCCTCGTACAAGGAATCAATCTCGATCGTCGTTTGTGCAGT-GGAGGAGAGAGTCCT 138210 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATT--GATTC 282136 | ||||| | |||||||||||||| | | || |||| || | | | || | | Sbjct 138209 C--TTAGCCCTCTCACATGCTGTCCTCA-ACCTCCTAAGAGCCCTAG--GGTTCCCACTG 138155 Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTAT 282194 | ||| | || | ||||||||||| |||| ||| | ||| | || | || || | Sbjct 138154 ATATCCTTCTTGTTCTTTCTCTTGAACTCTTGGACAAA--ATGGTTGACCATGCGGTTGT 138097 Query 282195 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 282254 |||| || ||||| || | | |||| || | || || | || | || | || | Sbjct 138096 CAAAGTCCTCACCACCAAGATGGGTATCACCAGCAGTGGCCTTGACCTCAAAGATACCCT 138037 Query 282255 CTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 282314 | || | | | ||| | |||||| || |||||||| | ||| || || || |||| Sbjct 138036 CCTCGATGGTAAGAAGGGAGACATCAAAAGTGCCACCACCTAGATCGAAGATGAGGACAT 137977 Query 282315 TCATTT--CTTTGTCTTG----GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 || | | | || | || || ||||| ||||| |||| |||||| || || | Sbjct 137976 TCTTCTCACCAACACTAGTAGCCTTCTTGTCAAGGCCATAAGCAATAGCAGCTGCTGTGG 137917 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 | ||||| || ||||||| ||||| ||||||||||| || ||||| || ||||| | Sbjct 137916 GCTCATTGATGATTCTCATTACATTGAGACCAGCAATGACACCAGCATCCTTTGTGGCCT 137857 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 | | ||||| || || || || ||||||||||| | || |||| Sbjct 137856 GGCGCTGTGAGTCATTGAAGTAAGCAGGAACAGTGACGACAGCAT 137812 >seq149 Length=483254 Score = 143 bits (158), Expect = 2e-28 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| |||| |||||||||||||||||||| |||||||| |||| |||||||||| Sbjct 378329 CCATAGGCAAGCGCAGCAGCAGTTGGTTCATTGATAATTCTTTGTACATCAAGACCAGCA 378388 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || || |||||||| || || || || | ||| | ||| |||||||||||||||||||| Sbjct 378389 ATCCTCCCTGCATCCTTTGTAGCCTGACGTTGGGCATCATTAAAATATGCAGGAACAGTG 378448 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523 ||||| || | || ||| || |||| ||||| || |||| |||||| || | Sbjct 378449 ATAACAGCCTTTGAAACTGACTTCCCAAGATAAGATTCAGCAGTTTCTTTCATCTTTGTC 378508 Query 282524 AAAATCATTGATGAAATTTGTTCTGGAGAATATTGCT 282560 |||| | || ||| || |||||||| |||| Sbjct 378509 AAAACAAATGCACCAATCTGGCTGGGAGAATACTGCT 378545 >seq218 Length=377784 Score = 138 bits (152), Expect = 8e-27 Identities = 184/254 (72%), Gaps = 9/254 (4%) Strand=Plus/Minus Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT 282333 ||||||| ||||||||||| | |||||||| |||| | | | | |||| | Sbjct 187720 AACATCAAATGTTCCACCACCAAGATCAAAAAC---TACAATGAGACCCTC--CTTGTTG 187666 Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 || | | ||||| |||| ||||| |||||||||||||| |||||||| ||||| Sbjct 187665 TTCAAC----CCATAAGCAAGTGCAGCTGCAGTTGGTTCATTGATAATTCTTTGAACATC 187610 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 ||||| | |||| |||||||||| || || || || | ||||| ||| ||||||||||| Sbjct 187609 GAGACCGGAAATTTTTCCTGCATCCTTTGTAGCCTGACGTTGTGCATCATTAAAATATGC 187550 Query 282454 AGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTT 282513 ||||||||| ||||| || | || || ||||| | ||| | ||| |||| ||| Sbjct 187549 AGGAACAGTGATAACAGCCTTTGACACAGACTTTCCGAGATACGACTCTGCAGTTTCTTT 187490 Query 282514 CATTTTACTTAAAA 282527 ||| || | |||| Sbjct 187489 CATCTTTGTCAAAA 187476 Score = 93.3 bits (102), Expect = 3e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 86116 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 86175 || || || ||||| || ||||||||||||||||| || ||| | ||||||| | ||| Sbjct 187662 AACCCATAAGCAAGTGCAGCTGCAGTTGGTTCATTGATAATTCTTTGAACATCGAGACCG 187603 Query 86176 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 86235 | |||||| | | ||| || || || | ||||| |||||||||||||| || ||| Sbjct 187602 GAAATTTTTCCTGCATCCTTTGTAGCCTGACGTTGTGCATCATTAAAATATGCAGGAACA 187543 Query 86236 GTAATAACTGCTTT 86249 || ||||| || || Sbjct 187542 GTGATAACAGCCTT 187529 >seq1739 Length=59418 Score = 122 bits (134), Expect = 7e-22 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||||| || ||||||||||| || ||||| ||||| |||| || | || |||||| Sbjct 40939 CCATACGAAAGGGCAGCAGCAGTGGGCTCATTGATAATCCTCAGGACCTCGAGCCCAGCA 40880 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || || |||||||| || || || || | |||| ||| ||||| |||||||| ||||| Sbjct 40879 ATCCTCCCTGCATCCTTTGTTGCCTGACGCTGTGCATCATTAAAGTATGCAGGGACAGTG 40820 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTA 282520 || || || | || || ||| |||| |||||| |||||||| ||||| ||| Sbjct 40819 ATGACTGCCTTTGAAACAGATTTACCAAGATAAGCCTCTGCTGTTTCCTTCATCTTA 40763 >seq304 Length=317199 Score = 120 bits (132), Expect = 2e-21 Identities = 157/217 (72%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 282245 AAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAA 282304 |||| ||||| || | ||||| | | | |||||| || |||||||| | |||||| Sbjct 164809 AAAACTCCATTATCGATCGACAAGATACTGACATCAAATGTCCCACCACCAAGGTCAAAA 164750 Query 282305 ATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 | ||| | ||| | ||| | | | ||||| ||||||||||| | |||||||| Sbjct 164749 ACAAGGATGTTCTTCTCTCCACCCT---TCTTATCGAGACCATACGCGATTGCAGCAGCT 164693 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 ||||| |||||||| || || | |||||| | ||||| || |||| ||||| || || Sbjct 164692 GTTGGCTCATTAATGATCCTAACAACATTCAAGCCAGCTATCGTTCCAGCATCCTTTGTT 164633 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAG 282461 || || || || | ||| || |||||||| ||||||| Sbjct 164632 GCCTGCCTCTGAGCATCATTGAAATATGCTGGAACAG 164596 >seq297 Length=319342 Score = 113 bits (124), Expect = 3e-19 Identities = 149/206 (72%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 282245 AAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAA 282304 |||| |||| |||| | ||| | | | |||||| || |||||||| | |||||| Sbjct 250101 AAAACTCCAGTATCAAATGTCAAGATACTGACATCAAATGTCCCACCACCAAGGTCAAAA 250042 Query 282305 ATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 | ||| | ||| |||| | | | || |||| ||||| |||| |||||||||| Sbjct 250041 ACAAGGATGTTCTTTTCCCCACCCT---TCTTGTCAATTCCATATGCAATAGCAGCAGCA 249985 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 || || ||||| ||||| ||| |||||| |||||||||||| |||| ||||| || ||| Sbjct 249984 GTCGGCTCATTGATAATCCTCGCAACATTCAGACCAGCAATTATTCCAGCATCCTTGGTG 249925 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATA 282450 || || || || | ||| || || || Sbjct 249924 GCCTGCCTCTGGGCATCATTGAAGTA 249899 >seq623 Length=175835 Score = 109 bits (120), Expect = 4e-18 Identities = 149/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT 282333 ||||||| ||| ||||| |||| |||||| | ||| | | |||| |||| | || Sbjct 42123 AACATCAAAGGTGCCACCTCCCAAATCAAATACAAGAA---TGGTTTCATTGTTCTTCTT 42067 Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 || ||| ||| || || || | |||||| ||||| |||||||| || | | || | Sbjct 42066 TT---CAAAACCGTATGCCAATGAAGCAGCTGTTGGCTCATTAATGATCCGAAGGACTTC 42010 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 | ||||||||| | || ||||| || || ||| ||||| || || ||||||||||| Sbjct 42009 TAAACCAGCAATACGACCAGCATCCTTTGTAGCTGTCCTTTGGGAGTCATTAAAATATGC 41950 Query 282454 AGGAACAGTAATAACGGCATCTGTTAC 282480 ||||||||||| || || | ||| || Sbjct 41949 AGGAACAGTAACTACTGCTTTTGTAAC 41923 Score = 86.0 bits (94), Expect = 5e-11 Identities = 146/212 (69%), Gaps = 15/212 (7%) Strand=Plus/Minus Query 86038 GAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTACGTTACCACCAGtttttttA 86097 |||||||| || || ||| |||| || ||| | |||| | | | || || || Sbjct 42125 GAAACATCAAAGGTGCCACCTCCCAAATCAAATACAAGAATGGTTTCA------TTGTTC 42072 Query 86098 TTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATT 86157 ||| |||||| ||||||||||| | | || || ||||| |||||||| || Sbjct 42071 TTC---TTTTCA------AAACCGTATGCCAATGAAGCAGCTGTTGGCTCATTAATGATC 42021 Query 86158 TTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCA 86217 ||| || |||||||| ||||| | ||| ||| || ||| || || | |||| Sbjct 42020 CGAAGGACTTCTAAACCAGCAATACGACCAGCATCCTTTGTAGCTGTCCTTTGGGAGTCA 41961 Query 86218 TTAAAATATGCTGGTACAGTAATAACTGCTTT 86249 ||||||||||| || ||||||| |||||||| Sbjct 41960 TTAAAATATGCAGGAACAGTAACTACTGCTTT 41929 >seq436 Length=239227 Score = 107 bits (118), Expect = 1e-17 Identities = 310/468 (66%), Gaps = 18/468 (4%) Strand=Plus/Minus Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAG---TCGAAGAAGATA 282074 |||| || || ||| | | || |||| ||||| || || |||| ||||||| || | Sbjct 155325 AATCGATGCCCTCGTAGAGGGAGTCAATCTCAATGGTGGTCTGAGCAGTCGAAGA-GAGA 155267 Query 282075 GTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTG- 282132 || | | || || | ||||| |||||||| || |||| |||| || | | ||||| Sbjct 155266 GTCCTC--TTCGCCCTCTCACAAGCTGTCCTAAGCCTTC-TAAGCGCCCTGG--GATTGC 155212 Query 282133 -ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGAT 282191 | | | || | || | || |||||||| || | ||| | | || | || | Sbjct 155211 CACTGATGTCCTTCTTGTGCTTCCTCTTGAACTCCTGAACGAAGTGATTCACCATCCGGT 155152 Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 | ||||| || || || || | | ||| | || | || || | || | || | | Sbjct 155151 TGTCAAAGTCCTCGCCACCAAGGTGAGTGTCACCAGCAGTGGCCTTCACCTCAAAGATAC 155092 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 | ||||| | | | ||||| ||||| ||| || ||||| | ||||| || || | Sbjct 155091 CCTCTTCGATGGTGAGAAGAGAGACATCGAAGGTGCCGCCACCGAGGTCAAAGATGAGCA 155032 Query 282312 CATTCATTTCTTTGT--CTTGG----TTTTTATCAAGACCATACGCAAAAGCAGCAGCAG 282365 ||||| | || |||| ||||| || |||||||| |||| |||||||||| Sbjct 155031 CATTCTTCTCACCAGAACTTGTAGCCTTTTTGTCCAGACCATAGGCAATGGCAGCAGCAG 154972 Query 282366 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 282425 | || ||||| || || | ||||||||| || || ||||| ||| ||||| || |||| Sbjct 154971 TGGGCTCATTGATGATCCGCAAAACATTGAGCCCCGCAATGACTCCGGCATCCTTTGTGG 154912 Query 282426 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 | || | || || ||||| || || ||||| || || | || |||| Sbjct 154911 CCTGCCGCTGCGAGTCGTTGAAGTAGGCAGGGACCGTGACCACCGCAT 154864 >seq236 Length=366593 Score = 105 bits (116), Expect = 5e-17 Identities = 164/234 (70%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 282238 TACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCAT 282297 ||||| ||||| ||||| |||| | ||| | ||||||| || |||||||| | Sbjct 317489 TACTTCGAAAACTCCATTATCAATGGTCAAGATGCTAACATCGAATGTACCACCACCAAG 317430 Query 282298 ATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGC 282357 || |||| ||| | ||| | || | | | || || |||||||| || | || Sbjct 317429 GTCGAAAACAAGAATGTTCTTCTCACCACCCT---TCTTGTCCAGACCATATGCTATGGC 317373 Query 282358 AGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATC 282417 ||||||||| |||||||| || ||||| ||||| | ||||||||| |||| ||||| Sbjct 317372 AGCAGCAGTGGGTTCATTGATTATTCTAGCCACATTCAAGCCAGCAATTATTCCGGCATC 317313 Query 282418 TTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 || || || |||||||| | ||| || || || || ||| | ||||| ||| Sbjct 317312 CTTGGTCGCCTGTCTTTGAGCATCATTGAAGTAAGCTGGAGGACAAATAAGGGC 317259 >seq1381 Length=78880 Score = 102 bits (112), Expect = 6e-16 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| | || ||||| |||||||| ||||| ||||| || | || | || |||||| Sbjct 19027 CCATAGGAAAGTGCAGCTGCAGTTGGCTCATTGATAATCCTAAGGACTTCGAGCCCAGCA 18968 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 ||||| |||||||| || || || || | |||| ||| ||||| || || |||||||| Sbjct 18967 ATTCTCCCTGCATCCTTTGTAGCCTGGCGCTGTGCATCATTAAAGTAGGCGGGAACAGTG 18908 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 || || || | | || ||| |||| |||||| ||| |||| ||||| || Sbjct 18907 ATGACAGCCTTCGAAACAGATTTACCAAGATAAGCCTCTGCGGTTTCCTTCATCTT 18852 >seq228 Length=371662 Score = 100 bits (110), Expect = 2e-15 Identities = 158/226 (70%), Gaps = 3/226 (1%) Strand=Plus/Minus Query 282239 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATA 282298 |||| |||| ||||| |||| | ||| | |||||||| ||||||||||| | | Sbjct 306832 ACTTCAAAAACTCCATTGTCAATTGTCAAGATGCTAACATCAAATGTTCCACCACCAAGA 306773 Query 282299 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 282358 || |||| ||| | ||| | || | | | || || || ||||| || | ||| Sbjct 306772 TCGAAAACAAGGATGTTCTTCTCACCACCCT---TCTTGTCCAGGCCATATGCTATGGCA 306716 Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418 ||||| ||||||||||| || ||||| ||||| | |||| ||| | || ||||| Sbjct 306715 GCAGCTGTTGGTTCATTGATTATTCTAGCCACATTCAATCCAGATATTATGCCGGCATCC 306656 Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464 || || || |||||||| | ||| || ||||| || ||| ||| || Sbjct 306655 TTGGTTGCCTGTCTTTGAGCATCATTGAAATAAGCTGGAGCAGCAA 306610 >seq185 Length=418228 Score = 100 bits (110), Expect = 2e-15 Identities = 135/187 (72%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 282341 AGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCA 282400 || |||| |||| ||||| ||||||||||||| |||||||| |||| || |||| Sbjct 361138 AGCCCATCAGCAAGTGCAGCT-CAGTTGGTTCATTGATAATTCTTTGCACATCAACACCA 361080 Query 282401 GCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACA 282460 | |||||| |||||||| || || || || ||| | ||| | ||||||||||||||| Sbjct 361079 GAAATTCTCCCTGCATCCTTTGTAGCCTGATGTTGCGCATCATCAAAATATGCAGGAACT 361020 Query 282461 GTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTA 282520 || ||||| || | | || || |||| ||||| || |||| |||||| || Sbjct 361019 GTGATAACTGCTTTAGACACGGACTTCCCAAGATAAGATTCAGCAGTTTCTTTCATCTTT 360960 Query 282521 CTTAAAA 282527 | |||| Sbjct 360959 GTCAAAA 360953 >seq81 Length=612130 Score = 91.5 bits (100), Expect = 1e-12 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 432290 TAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGTAC 432349 ||||||||| || |||||||| || ||||||||||||||||| ||| | || ||||| || Sbjct 361155 TAAAGAAGGCCGAATTAGAGGTAACTTGATGGGAAAGCGTGTTGATTTTTCAGCACGAAC 361096 Query 432350 AGTTATTACTTCTGATCCTA 432369 ||||||||| |||| |||| Sbjct 361095 AGTTATTACACCTGACCCTA 361076 >seq405 Length=252728 Score = 89.7 bits (98), Expect = 4e-12 Identities = 135/191 (71%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT 282333 ||||||| |||||||| |||| ||||| | || | | |||| || | || || Sbjct 24812 AACATCAAAAGTTCCACCTCCCAAGTCAAACACTAGAA---TTGTTTCATTATTTTTCTT 24868 Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 || ||| ||||| || || | ||||| || || ||||| || || | | |||| Sbjct 24869 TT---CAAATCCATATGCCAATGATGCAGCTGTAGGCTCATTGATGATACGAAGGACATC 24925 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 ||||||||||| | || |||||||| || ||| ||||| || |||||||| ||||| Sbjct 24926 CAGACCAGCAATACGCCCAGCATCTTTTGTTGCTGTCCTTTGAGAGTCGTTAAAGTATGC 24985 Query 282454 AGGAACAGTAA 282464 ||| || |||| Sbjct 24986 AGGCACTGTAA 24996 >seq78 Length=621307 Score = 86.0 bits (94), Expect = 5e-11 Identities = 128/181 (71%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 282273 TAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGT 282332 ||||||| || |||||||| | ||||||| ||| | ||| |||| | | Sbjct 266857 TAACATCGAATGTCCCACCACCAAGGTCAAAAACAAGAATGTTCTTTTCACCACCCT--- 266801 Query 282333 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 282392 | || || |||||||| || | |||||||| ||||||||||| |||||||| |||| Sbjct 266800 TCTTGTCCAGACCATATGCTATGGCAGCAGCGGTTGGTTCATTGATAATTCTGGCCACAT 266741 Query 282393 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 282452 | | |||| || | || |||||||| || || || ||||| | ||| || ||||| | Sbjct 266740 TCAAGCCAGATATAATGCCAGCATCTTTGGTTGCCTGCCTTTGAGCATCATTGAAATAAG 266681 Query 282453 C 282453 | Sbjct 266680 C 266680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739235343581790