Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20itinerans_20[genbank_20GCA_5F001649415.1_202016-05-21] 28,415 sequences; 455,349,267 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq81 86.0 1e-11 >seq81 Length=612130 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/152 (74%), Gaps = 5/152 (3%) Strand=Plus/Minus Query 304987 TAAAGG-TAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTG 305045 |||||| |||||| || || ||| ||||||| | |||||||| |||||||||||| | Sbjct 361162 TAAAGGCTAAAGAAGGCCGAATTAGAGGTAACTTGATGGGAAAGCGTGTTGATTTTTCAG 361103 Query 305046 CAAGAAGTGTAATCACACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTG 305105 || ||| || || |||||||| || ||| | || ||||| | |||||||| ||| Sbjct 361102 CACGAACAGTTATTACACCTGACCCTACAATCAACATTGATGAACTGGGAGTTCC--TTG 361045 Query 305106 AA--ATTGCTTTAAAACTAACATTTCCAGAGA 305135 | || ||||| || || || | ||||||| Sbjct 361044 GAGCATAGCTTTGAATCTTACGTACCCAGAGA 361013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186380720401815