Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20itinerans_20[genbank_20GCA_5F001649415.1_202016-05-21] 28,415 sequences; 455,349,267 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1066 89.7 5e-13 >seq1066 Length=105919 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||| || ||| |||||||| || |||| Sbjct 79638 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCG 79579 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| || || ||||| || || || ||| || |||| Sbjct 79578 AAGATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTCACG 79519 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | || ||||| |||| || | ||| || || ||||| || || Sbjct 79518 TTGTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGTCTTCCCCGTCAGCGTCTTC 79459 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 79458 ACGAAGATCTGCAT 79445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476441913659400