Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20itinerans_20[genbank_20GCA_5F001649415.1_202016-05-21] 28,415 sequences; 455,349,267 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1530 93.3 4e-14 >seq1530 Length=69702 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| | ||||| || | ||||| | || |||||| | Sbjct 26319 ATGCAAATTTTCGTTAAAACTCTCACCGGTAAGACCATCACCCTTGAGGTCGAATCTTCT 26260 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | ||||| || ||| || |||||||| || || || || ||| Sbjct 26259 GACACCATTGATAATGTAAAGGCCAAGATTCAAGACAAAGAGGGCATTCCCCCAGACCAG 26200 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGC-GATTACAA 25353 ||||| | || | | || |||||| | || |||| | | | | ||| || ||||| Sbjct 26199 CAAAGGTTGATATTTGCTGGGAAACAATTAGAGGATGGTCGCACCCT-AGCAGACTACAA 26141 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 |||||| || ||||| ||| ||||||| ||| | || ||||| ||||||| Sbjct 26140 TATTCAGAAGGAATCTACCCTTCATTTGGTGCTCAGGTTGAGGGGAGGAA 26091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444936308032800