Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20itinerans_20[genbank_20GCA_5F001649415.1_202016-05-21] 28,415 sequences; 455,349,267 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq1530 93.3 3e-14 >seq1530 Length=69702 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||| ||||| || | || ||||||||||| ||| | || ||| | Sbjct 25180 AATGCAAATTTTCGTTAAGACTCTCACCGGCAAGACCATCACCCTTGAGGTTGAATCTTC 25121 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 |||| || ||| | |||||| |||||| |||||||| || | ||| | ||||| Sbjct 25120 CGATACTATTGATAATGTGAAAGCTAAAATTCAAGACAAAGAGGGTATTCCCCTAGATCA 25061 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||||| | || | ||| || ||||||||||| ||| | || | | || ||||| Sbjct 25060 GCAAAGGTTGATCTTTGCTGGGAAACAATTAGAGGATGGTCGCACCCTAGCGGACTACAA 25001 Query 106439 CATACAAAAAGAATCTACACTACA 106462 ||| || || || || || || || Sbjct 25000 CATCCAGAAGGAGTCCACCCTCCA 24977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402190270116320