Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq23 107 4e-18 seq2 107 4e-18 seq77 104 5e-17 seq35 104 5e-17 seq21 104 5e-17 seq8 104 5e-17 seq6 104 5e-17 seq3 104 5e-17 seq111 98.7 2e-15 seq10 87.8 4e-12 >seq23 Length=2780208 Score = 107 bits (118), Expect = 4e-18 Identities = 155/215 (72%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 230416 GAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGG 230474 |||||| | || ||||| | || || ||| || | |||||||||| | || ||| | Sbjct 1221869 GAGTTCGTCTGCGACGCGCTCCCCTG-CGCGCTCGTCGGCATGAACGGCGTGCTCATGAG 1221811 Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534 ||||||||||| ||||| ||||||||| | | | || || || || |||| | || Sbjct 1221810 CCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCATGGCGCTGGGACACAAGAAGATATA 1221751 Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594 |||| ||||| || | | ||||||||||| || || || || |||||||| || Sbjct 1221750 CAACGTCGTCAACCCGTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAATTT 1221691 Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAG-AGGCCT 230628 |||||| ||||| ||| | || || ||| |||||| Sbjct 1221690 CTTCGAGAAGCGCGTCGGCGAGTACCAGAAGGCCT 1221656 >seq2 Length=7708084 Score = 107 bits (118), Expect = 4e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||||||||||||||||||||||||| || || |||| || |||||||||||||||| Sbjct 5606701 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 5606642 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 5606641 GCCCCACGGTGGGC 5606628 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 5787267 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 5787208 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5787207 CCCACGGTGGGC 5787196 >seq77 Length=972522 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 79685 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 79744 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 79745 CCCACGGTGGGC 79756 >seq35 Length=2142944 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 75540 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 75599 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 75600 CCCACGGTGGGC 75611 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 84753 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84812 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 84813 CCCACGGTGGGC 84824 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 642247 GCCCGTCTAGCTCAGTAGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 642306 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 642307 CCCACGGTGGGC 642318 >seq21 Length=2904860 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 2323837 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2323778 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2323777 CCCACGGTGGGC 2323766 >seq8 Length=4429347 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 2500794 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2500735 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2500734 CCCACGGTGGGC 2500723 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 2820201 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2820260 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2820261 CCCACGGTGGGC 2820272 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 2964495 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2964554 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2964555 CCCACGGTGGGC 2964566 >seq6 Length=4879660 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 43004 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 42945 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 42944 CCCACGGTGGGC 42933 >seq3 Length=7343539 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 4913980 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4914039 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4914040 CCCACGGTGGGC 4914051 >seq111 Length=380619 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 249756 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 249697 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 249696 CCCACGGTGGGC 249685 >seq10 Length=4141579 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||||| || ||||| || || |||| | ||||||||||||| ||| Sbjct 1863128 TGCCCGTCTAGCTCAGTCGATAAAGCGCAAGGCTCTTAACTTTGTGGTCGTGGGTTTGAG 1863069 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1863068 CCCCACGGTGGGC 1863056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057815529143750