Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq153 84.2 2e-11 seq61 84.2 2e-11 >seq153 Length=68039 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 || |||||||||||||| || | ||||||||| |||||||| ||||| ||||| | Sbjct 54966 ACTTGAGCAATCATGCATGTGAGAAGAGAATATGATGCAATGTTGAATGGAACTCCAAGA 55025 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCC-ATCACAGACATAAAA 101874 ||||| ||||| || | |||||||| || || || |||| || || || |||||||| Sbjct 55026 CCCATGTCAGCAGAGCGTTGATACATCTGGCACGATAGCTCCCCGTTCTCA-ACATAAAA 55084 Query 101875 TTG 101877 || Sbjct 55085 CTG 55087 >seq61 Length=1472992 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 || |||||||||||||| || | ||||||||| |||||||| ||||| ||||| | Sbjct 352458 ACTTGAGCAATCATGCATGTGAGAAGAGAATATGATGCAATGTTGAATGGAACTCCAAGA 352399 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCC-ATCACAGACATAAAA 101874 ||||| ||||| || | |||||||| || || || |||| || || || |||||||| Sbjct 352398 CCCATGTCAGCAGAGCGTTGATACATCTGGCACGATAGCTCCCCGTTCTCA-ACATAAAA 352340 Query 101875 TTG 101877 || Sbjct 352339 CTG 352337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361248448281875