Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20]
625 sequences; 243,174,629 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq46 82.4 9e-11
>seq46
Length=1857289
Score = 82.4 bits (90), Expect = 9e-11
Identities = 106/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483
||| || ||||| || | || || |||||||| |||||||| | ||| | ||||
Sbjct 1671211 AGTGCCGGCATTGAAAAGAGTTGGTGAAGCGTGTGTAAACCAGCGCTGAGACATCAGATG 1671152
Query 54484 GTACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTA 54542
||| || | ||| || || || || || | ||| || || ||||||| || | |||||
Sbjct 1671151 GTATGTTTTGATGGCAGATTCAATGTCATCCTTG-TGTATGCCTACTGAAACTCTCATTA 1671093
Query 54543 ACATGTGCTGAGGTCTTTCAACGA 54566
||||||| || |||||||||||||
Sbjct 1671092 ACATGTGTTGTGGTCTTTCAACGA 1671069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593716961550000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |