Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq46 82.4 9e-11 >seq46 Length=1857289 Score = 82.4 bits (90), Expect = 9e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483 ||| || ||||| || | || || |||||||| |||||||| | ||| | |||| Sbjct 1671211 AGTGCCGGCATTGAAAAGAGTTGGTGAAGCGTGTGTAAACCAGCGCTGAGACATCAGATG 1671152 Query 54484 GTACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTA 54542 ||| || | ||| || || || || || | ||| || || ||||||| || | ||||| Sbjct 1671151 GTATGTTTTGATGGCAGATTCAATGTCATCCTTG-TGTATGCCTACTGAAACTCTCATTA 1671093 Query 54543 ACATGTGCTGAGGTCTTTCAACGA 54566 ||||||| || ||||||||||||| Sbjct 1671092 ACATGTGTTGTGGTCTTTCAACGA 1671069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593716961550000