Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq46 84.2 5e-11 >seq46 Length=1857289 Score = 84.2 bits (92), Expect = 5e-11 Identities = 167/241 (69%), Gaps = 6/241 (2%) Strand=Plus/Plus Query 248783 TGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGC 248842 ||||| ||| |||| || | || || || || || || | ||||| ||||| || | Sbjct 1670973 TGGACAGCGAGATTATATATGACAGGGACTTCGACTATGACTACTTTGGGTTCAAGACTC 1671032 Query 248843 TGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGT 248902 |||||| || ||||| | || | | || || |||| ||| || || ||||||| Sbjct 1671033 TGGAGAGGTCTTATCTTTTAAAGCTAGGAGGGAAAGTCGTTGAAAGACCACAACACATGT 1671092 Query 248903 TGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGC--TCGAGACGTA 248960 | ||| |||| | || || || |||||||||||||| || | | ||| || | || || Sbjct 1671093 TAATGAGAGTTTCAGTAGGCATACACAAGGATGACATTGA-ATC-TGCCATCAAAACATA 1671150 Query 248961 -CACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTA 249019 || | | ||| | | |||||| | ||||| || |||| || || ||||| ||||| | Sbjct 1671151 CCATCTG-ATGTCTCAGCGCTGGTTTACACACGCTTCACCAACTCTTTTCAATGCCGGCA 1671209 Query 249020 C 249020 | Sbjct 1671210 C 1671210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073757801480000