Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20]
625 sequences; 243,174,629 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq49 86.0 5e-12
>seq49
Length=1823295
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| |||| || || || |||| |||||||| || ||||| ||||||||||| || ||
Sbjct 1214215 TCCACCCCTGAGCCTTAGGACCAGATGAAGTGTCGACTCTTTCTGAATGTTGTAATCAGC 1214274
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| |||| | | |||||||||||| || || || | || || ||||| || || |||
Sbjct 1214275 TAATGTTCTCCCATCTTCCAATTGCTTACCAGCGAAAATCAGCCTTTGCTGGTCTGGGGG 1214334
Query 18218 CACGCCTTCCTTATC 18232
| ||| ||||| ||
Sbjct 1214335 GATGCCCTCCTTGTC 1214349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379341110465625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |