Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq23 89.7 6e-13 >seq23 Length=2780208 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/136 (75%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| ||||||||||| |||||||| | || | ||||| || || |||||| Sbjct 1221952 CAGGCGAAGTCGCAGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGT 1222011 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || ||||| ||||| ||||| || ||||| || |||| ||| || || || |||||| Sbjct 1222012 CCCGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAG 1222071 Query 33702 ATTCCTTCTACTGCAG 33717 || || || || |||| Sbjct 1222072 ATGCCCTCGAC-GCAG 1222086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629812679550000