Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq57 84.2 1e-11 >seq57 Length=1649376 Score = 84.2 bits (92), Expect = 1e-11 Identities = 147/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| || | ||| || || || || ||||||||||||| ||| || || || ||| Sbjct 1450314 ACCAAGTGAAGTGTGGATTCCTTCTGGATATTGTAATCAGCCAATGTGCGTCCATCCTCC 1450255 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCG 33277 | ||||||||| |||||| | | |||||||| | || |||||||| || || | Sbjct 1450254 AGCTGCTTTCCAGCAAATATAAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGG 1450195 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | ||| || || | | ||| ||||| | | ||| || |||||||| || Sbjct 1450194 ATCTTTGCC---TTCACATTATCAATGGTGTCAGAGCTCTCAACCTCAAGAGTTATGGTC 1450138 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 ||||| || || || || || || || |||||| Sbjct 1450137 TTTCCAGTGAGCGTCTTCACAAAGATCTGCATG 1450105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318775171811250