Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq49 116 3e-21 seq165 109 4e-19 seq4 109 4e-19 seq17 105 5e-18 seq57 98.7 8e-16 seq8 87.8 1e-12 >seq49 Length=1823295 Score = 116 bits (128), Expect = 3e-21 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 |||||||| |||| || || ||||||||||| || ||||||||||| || | ||| | Sbjct 157449 AGCCTCAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGG 157508 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 ||||||| | || ||||| ||| | || || ||||| |||||| || | |||||| Sbjct 157509 CCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 157568 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGG 16895 ||||| || || || |||||| | | | | |||||| || ||| |||| || Sbjct 157569 TTGTCCTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCGGAGGACTCAACCTCCAGGG 157626 Query 16896 TGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || || || || |||||||| |||||||| Sbjct 157627 TAATAGTCTTCCCAGTGAGGGTCTTGACAAAGATCTGCAT 157666 Score = 109 bits (120), Expect = 4e-19 Identities = 161/227 (71%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| |||||||| || | || || ||||||||||| || ||||||||||| || Sbjct 157668 CCACCTCTCAGCCTCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 157727 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || ||||| || | || || ||||| |||||| || Sbjct 157728 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCC-GGGGG 157786 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| ||| | |||||| | | | | ||||| || |||| Sbjct 157787 ATGCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 157846 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || || || || || ||||| ||||||||||| Sbjct 157847 TCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAAATCTGCAT 157893 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || |||| || || ||||||||||| || ||||||||||| || | ||| | Sbjct 157904 AGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGG 157963 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 ||||||| | || ||||| || | || || ||||| |||||| || | |||||| Sbjct 157964 CCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 158023 Query 16838 TTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTG 16897 ||||| ||| | |||||| | | | | ||||| || |||| || | ||| Sbjct 158024 TTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGAGTG 158083 Query 16898 ATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || || || ||||| || |||||||| Sbjct 158084 ATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 158121 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||| ||||| || ||||||||||| |||| ||| | ||| Sbjct 156999 AGCACCAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGCCAGGGTACGTCCATCC 157058 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || ||||| ||| |||| || ||||| |||||| || | |||||| ||||| Sbjct 157059 TCCAGCTGCTTGCCTGCAAAAATCAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 157118 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | | ||||| | ||| |||| |||||| || Sbjct 157119 TGGATCTTCGCCTTCACATTGTCAATGGTGTCTGAAGACTCTACCTCCAAGGTGATAGTC 157178 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| |||||||| Sbjct 157179 TTCCCAGTGAGGGTCTTGACAAAGATCTGCAT 157210 Score = 104 bits (114), Expect = 2e-17 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || |||| || || ||||||||||| || |||||||||||||| | ||| | Sbjct 158132 AGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGG 158191 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 ||||||| | || ||||| || | || || ||||| |||||| || | |||||| Sbjct 158192 CCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 158251 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGG 16895 ||||| || || || |||||| | | | | || || || |||| || | || Sbjct 158252 TTGTCCTGGATCTTGGC--CTTCACGTTGTCAATGGTATCCGAGGACTCCACCTCGAGGG 158309 Query 16896 TGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | ||||| || ||||| || || || || || |||||||| Sbjct 158310 TTATGGTCTTGCCGGTAAGGGTCTTAACGAAGATCTGCAT 158349 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || || | || || ||||| ||||| || ||||||||||| || | ||| | Sbjct 157221 AGCCTAAGCACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGG 157280 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 | ||||| | || ||||| ||| | || || ||||| |||||| || | |||||| Sbjct 157281 CCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 157340 Query 16838 TTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTG 16897 ||||| ||| | |||||| | | | | ||||| || ||| |||| ||| Sbjct 157341 TTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCAGAGGACTCAACCTCCAAGGTA 157400 Query 16898 ATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || || || ||||| || |||||||| Sbjct 157401 ATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 157438 >seq165 Length=58862 Score = 109 bits (120), Expect = 4e-19 Identities = 156/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || ||||||||||| || |||||||||||||| | ||| | | ||| Sbjct 23341 AGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 23400 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| || | || || ||||| |||||| || | |||||| ||||| Sbjct 23401 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 23460 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| || |||| |||| ||||||| Sbjct 23461 TGGATCTTGGC--CTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGG 23518 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || || ||||| || || || || |||||||| ||| Sbjct 23519 TCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 23556 >seq4 Length=5694366 Score = 109 bits (120), Expect = 4e-19 Identities = 156/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || ||||||||||| || |||||||||||||| | ||| | | ||| Sbjct 3329476 AGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 3329417 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| || | || || ||||| |||||| || | |||||| ||||| Sbjct 3329416 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 3329357 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| || |||| |||| ||||||| Sbjct 3329356 TGGATCTTGGC--CTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGG 3329299 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || || ||||| || || || || |||||||| ||| Sbjct 3329298 TCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 3329261 >seq17 Length=3182705 Score = 105 bits (116), Expect = 5e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||||||||| || | ||| ||||| Sbjct 3005958 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGCCCGTCC 3006017 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| ||| | || |||| ||| |||||| ||| | |||||| ||||| Sbjct 3006018 TCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 3006077 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | ||||| || |||| || | |||||||| Sbjct 3006078 TGGATCTTGGC--CTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGG 3006135 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || || ||||| || |||||||| Sbjct 3006136 TCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3006169 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| |||| ||| ||||||||| || Sbjct 3006195 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGCCCGTCCTCCAGCTGC 3006254 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | ||||||| ||| |||||| || | ||||| ||||| || || Sbjct 3006255 TTGCCGGCGAAGATAAGCCTCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTG 3006314 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | ||||| || |||| || | ||||||||| || |||| Sbjct 3006315 GC--CTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGG 3006372 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || || ||||| || |||||||| Sbjct 3006373 TGAGGGTCTTGACGAAGATCTGCAT 3006397 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | || || || |||||||| || |||||||||||||| Sbjct 3005487 CCACCACGGAGGCGCAGCACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCA 3005546 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||||| || ||||| || | || |||| ||| |||||| || Sbjct 3005547 AGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGG 3005606 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || |||||| ||||| | | | |||||| | ||| Sbjct 3005607 ATGCCCTCCTTGTCCTGGATCTTTGCT--TTCACGTTATCAATGGTGTCGGAGCTCTCAA 3005664 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| ||||| |||| || || ||||| |||||||| Sbjct 3005665 CCTCCAGGGTGATGGTCTTTCCAGTCAAGGTCTTCACAAAGATCTGCAT 3005713 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | ||| |||| || || ||||||||||| || ||||||||||| || Sbjct 3006627 CCTCCTCTCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 3006686 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| ||||||| | || ||||| || | ||||||| ||| |||||| || Sbjct 3006687 AGGGTACGCCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGCCTCTGCTGGTCCGGGGGG 3006746 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | | ||||| || |||| Sbjct 3006747 ATGCCCTCCTTGTCCTGGATCTTAGC--CTTGACGTTGTCGATGGTGTCCGAGGACTCCA 3006804 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || ||||| || ||||| || || ||||| || |||||||| Sbjct 3006805 CCTCGAGCGTAATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3006853 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| |||| ||| ||||||||| || Sbjct 3006423 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGCCCGTCCTCCAGCTGC 3006482 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | || |||| ||| |||||| || | ||||| ||||| || || Sbjct 3006483 TTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTG 3006542 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | ||||| || |||| || | ||||||||| || |||| Sbjct 3006543 GC--CTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGG 3006600 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || ||||||||||| Sbjct 3006601 TGAGGGTCTTCACGAAAATCTGCAT 3006625 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||||||||| || ||||| ||||| || | ||| | ||||| | || Sbjct 3114814 TGGAGCGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTACGCCCATCCTCAAGCTGC 3114755 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| | | || |||| ||| |||||| ||| | |||||| ||||| ||| | Sbjct 3114754 TTGCCAGTGAAGATGAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTG 3114695 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | ||||| || |||| |||| ||||||||| || ||||| Sbjct 3114694 GCCTTGACATTGTCGATGGTGTCAGAGGACTCCACCTCCAGGGTGATGGTCTTGCCGGTG 3114635 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || ||||| || ||||||||| Sbjct 3114634 AGGGTCTTGACGAAGATCTGCATT 3114611 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | ||| ||||||||| || Sbjct 3114361 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGCCCGTCCTCCAGCTGC 3114302 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || ||| | || |||| ||| ||||||| ||| | |||||| ||||| || || Sbjct 3114301 TTCCCAGCAAAGATGAGCCTCTGCTGGTCCAGAGGGATGCCCTCCTTGTCCTGGATCTTG 3114242 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| | | | | | || | | || ||| || | ||||||||| || |||| Sbjct 3114241 GC--CTTGAAATTGTCAATGGTATACCAGGACTCGACCTCTAGGGTGATGGTCTTGCCGG 3114184 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || ||||| |||||||| Sbjct 3114183 TGAGGGTCTTCACAAAGATCTGCAT 3114159 Score = 87.8 bits (96), Expect = 1e-12 Identities = 163/237 (69%), Gaps = 12/237 (5%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || |||| || || || |||||||| || |||||||||||||| Sbjct 3115306 CCACCACGGAGGCGCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCA 3115247 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||||| || ||||| | | | || |||| ||| |||||| || Sbjct 3115246 AGAGTGCGGCCATCCTCCAGCTGCTTGCCAGTAAAGATGAGCCTCTGCTGGTCCGGGGGG 3115187 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-- 16884 | |||||| ||||| || || || |||||| | | | | ||||| || ||| Sbjct 3115186 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACATTGTCAATGGTGTCAGAGGACTCCA 3115129 Query 16885 ---CGTTTCCACG---GTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||| || |||||||| || ||||| || || ||||| || |||||||| Sbjct 3115128 CCTCGACTCCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3115072 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 7/214 (3%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||||||||| || | || ||||| Sbjct 3114595 AGCACCAGGTGTAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGTGTACGCCCGTCC 3114536 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| || | || |||| ||| |||||| || | |||||| ||||| Sbjct 3114535 TCGAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 3114476 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| ||| |||| || | ||||||| Sbjct 3114475 TGGATCTTGGC--CTTCACATTGTCAATGGTGTCAGCGGACTCCACATCGAGCGTGATGG 3114418 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || || ||| || |||||||| Sbjct 3114417 TCTTGCCGGTGAGGGTCTTG---AATATCTGCAT 3114387 Score = 82.4 bits (90), Expect = 6e-11 Identities = 145/209 (69%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||| ||||||| || | ||| ||||||| | || Sbjct 3115046 TGAAGGGTGGACTCCTTCTGGATGATGTAGTCAGCGAGGGTACGTCCGTCCTCGAGCTGC 3114987 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | || |||| ||| |||||| | | ||| || ||||| || || Sbjct 3114986 TTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGGCGGATGCCTTCCTTGTCTTGGATCTTA 3114927 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGG----TGATGGTTTTT 16906 || |||||| | | | | ||||| || |||| |||| || ||||||| || Sbjct 3114926 GC--CTTCACGTTGTCGATGGTGTCAGAGGACTCCACCTCCAGGGTGATTGATGGTCTTG 3114869 Query 16907 CCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || |||||||| |||||||| Sbjct 3114868 CCAGTGAGGGTCTTGACAAAGATCTGCAT 3114840 >seq57 Length=1649376 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | ||| || ||||| ||||| || |||||||| || ||| Sbjct 1450788 CCACCACGGAGGCGCAGGACAAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGCC 1450729 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| || || || ||| | ||||||| ||| || || ||| Sbjct 1450728 AAGGTACGCCCATCCTCCAGCTGCTTCCCAGCAAATATAAGCCTCTGCTGATCTGGAGGA 1450669 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | | |||||| | | | |||||| | |||| Sbjct 1450668 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTATCTATGGTGTCGGAGCTCTCCACC 1450609 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || || ||||||||||||||||| || ||||| Sbjct 1450608 TCAAGCGTGATGGTCTTGCCAGTCAGCGTTTTGACAAATATTTGCAT 1450562 >seq8 Length=4429347 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||||| |||||||| || | |||||||||||||| || ||||| Sbjct 2522475 AGCACCAGGTGCAGCGTCGACTCCTTCTGGACGTTGTAGTCGGCCAGCGTGCGCTCGTCC 2522416 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || || || ||| | || || ||||| || ||| || | | || ||||| Sbjct 2522415 TCCAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGCTCCGGCGGGATACTTTCCTTGTCC 2522356 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || ||||| ||| || | | | || || ||||||| ||| || | || | | Sbjct 2522355 TGGATCTTTGC--CTTGACATTGGCGACGGTATCGCCGGTCTCGACCTCGAGCGTCACCG 2522298 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | |||||| ||||||| || || || |||||||| Sbjct 2522297 TCTTTCCGATCAGCGTCTTCACGAAGATCTGCAT 2522264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405084914368750