Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq23 176 7e-39 >seq23 Length=2780208 Score = 176 bits (194), Expect = 7e-39 Identities = 496/749 (66%), Gaps = 22/749 (3%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| || ||||||||||||| || ||| || ||||| | |||| ||||| Sbjct 1221681 CTTCTCGAAGAAATTGGTCTTGCCCTGCAGGGAGATGAGCTCCATCCAGTCGAACGGGTT 1221740 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 |||| || |||| ||| || ||| |||| | ||| || || || || Sbjct 1221741 GACGACGTTGTATATCTTCTTGTGTCCCAGCGCCATGAGCAGGCGGTCGGCGACGAACTC 1221800 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| | ||| || | | ||| || || | ||| ||||||||| || | Sbjct 1221801 GATGTACTGGCTCATGAGCACGCCGTTCATGCCGACGAGCGCGCAGGGGAGCGCGTCGCA 1221860 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCT-GCGAGACACGTTCGTACC 159887 | ||||| ||| || ||||| || |||| || |||| ||| ||| || | | Sbjct 1221861 GACGAACTCGCGCTCGATGTCGACGGCGTCGGCGACGATCTCGCG-GACGCGGGCCTCGT 1221919 Query 159888 CCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCT 159947 | ||||| | | |||| | | || ||||| || |||||||||||||| |||| Sbjct 1221920 CGAGCTTGGAGCGGAGGAGGTCGT---AGAGTAGGCAGGCGAAGTCGCAGTGCAGGCCCT 1221976 Query 159948 CGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGA 160007 |||| || ||||||| ||||||||| | | |||| |||||||||| || ||| |||| Sbjct 1221977 CGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGTCCCGGCATGAGGCCGCGCTTCTTGA 1222036 Query 160008 GCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCAAACGCC 160066 |||| || |||| |||| ||| | | | | || ||||| ||||| ||| || ||||| Sbjct 1222037 GCCAGAAGATGG-CGCAGAAGGAGCCCGAGAAGAAGATGCCCTCGACGCAGGCGAACGCG 1222095 Query 160067 ACGAGCCTCTCACCAAAAGAGGCG-TTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 ||||| | ||| | || ||| | | | | | | |||| | ||||||| || || Sbjct 1222096 ACGAGGCGCTCCGC----GAAGCGCTCGCCGCCGTCGATCCAGCGCATGGCCCACTCGGC 1222151 Query 160126 CTTCTTTGCGATGCACGGC---ATGCG-CTCGACGGCGTTAAACAATCTGTCCTGCTCCT 160181 | ||||| ||||||| | || ||||| |||| |||| | ||||| |||| Sbjct 1222152 C----TTGCGGCGCACGGCGGGAACCGTCTCGATGGCGCGGAACAGGCGGTCCTTCTCCG 1222207 Query 160182 TCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGA 160241 | || ||| || | | |||| ||||||||| || | ||| | || |||| Sbjct 1222208 CGCCGTCGCGGATGTACGTCTCCAGCAGCAGCGAGTACATCTCCGAGTGGATGTTCTCGA 1222267 Query 160242 TGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACC 160301 |||| ||||| || ||| || |||||| ||| || ||| |||| | Sbjct 1222268 TGGCGATCTGGAACCCGTAAAAGGCGCGCGCCTCGGCGACCTGGACGTCCGACATGAAGC 1222327 Query 160302 TTTGAC-CCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 ||| | || || | || | ||||||| ||| || ||||| |||| |||||| Sbjct 1222328 -GGGACGCGAGGTTCTCCAGCACGATGCCGTCGGAGGCGGCGAAGAAGGCCAGCACGTGG 1222386 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAG 160389 ||||||||||| | |||||| |||||| Sbjct 1222387 GAGATGAAATGGCGCTCGTCGGGGTTGAG 1222415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795148987850000