Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20]
625 sequences; 243,174,629 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq403 111 6e-19
seq72 111 6e-19
seq8 111 6e-19
seq57 105 3e-17
>seq403
Length=29911
Score = 111 bits (122), Expect = 6e-19
Identities = 145/200 (73%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324
||| | || || ||||| || ||||| ||| |||| |||| | || | | |||
Sbjct 23910 GTTTTGACCAAGATGAAGGAGACAGCGGAAGCATATCTTGGCAAATCTGTCTCAAAGGCA 23851
Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384
|| |||||||||| || |||||||||||||| || || ||||| || || ||||| ||
Sbjct 23850 GTGGTTACTGTTCCAGCATATTTCAATGATGCTCAGCGTCAAGCCACAAAGGATGCGGGT 23791
Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444
| |||||||| | | ||| | ||||| |||||||| |||||||||||||| |
Sbjct 23790 CGGATTGCTGGCCTTGAGGTTGAAAGGATTATCAATGAACCGACAGCAGCTGCTCTGTCT 23731
Query 451445 TATGGACTAGGAAAATCAAA 451464
||||| || ||| | ||||
Sbjct 23730 TATGG--TATGAACAACAAA 23713
>seq72
Length=1231634
Score = 111 bits (122), Expect = 6e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381
|| || ||||||||||| ||||||||||||||||| || || ||||| || || ||||||
Sbjct 277053 GCTGTGATTACTGTTCCAGCTTATTTCAATGATGCCCAGCGTCAAGCCACAAAGGATGCA 276994
Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441
|| | |||||||| | ||||| | || || |||||||| ||||||||||||||
Sbjct 276993 GGCCGCATTGCTGGCCTCGATGTTGAAAGGATCATCAATGAACCAACAGCAGCTGCTCTG 276934
Query 451442 GCATATGGA 451450
| ||||||
Sbjct 276933 TCTTATGGA 276925
>seq8
Length=4429347
Score = 111 bits (122), Expect = 6e-19
Identities = 145/200 (73%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324
||| | || || ||||| || ||||| ||| |||| |||| | || | | |||
Sbjct 1911507 GTTTTGACCAAGATGAAGGAGACAGCGGAAGCATATCTTGGCAAATCTGTCTCAAAGGCA 1911448
Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384
|| |||||||||| || |||||||||||||| || || ||||| || || ||||| ||
Sbjct 1911447 GTGGTTACTGTTCCAGCATATTTCAATGATGCTCAGCGTCAAGCCACAAAGGATGCGGGT 1911388
Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444
| |||||||| | | ||| | ||||| |||||||| |||||||||||||| |
Sbjct 1911387 CGGATTGCTGGCCTTGAGGTTGAAAGGATTATCAATGAACCGACAGCAGCTGCTCTGTCT 1911328
Query 451445 TATGGACTAGGAAAATCAAA 451464
||||| || ||| | ||||
Sbjct 1911327 TATGG--TATGAACAACAAA 1911310
Score = 111 bits (122), Expect = 6e-19
Identities = 145/200 (73%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324
||| | || || ||||| || ||||| ||| |||| |||| | || | | |||
Sbjct 1948212 GTTTTGACCAAGATGAAGGAGACAGCGGAAGCATATCTTGGCAAATCTGTCTCAAAGGCA 1948153
Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384
|| |||||||||| || |||||||||||||| || || ||||| || || ||||| ||
Sbjct 1948152 GTGGTTACTGTTCCAGCATATTTCAATGATGCTCAGCGTCAAGCCACAAAGGATGCGGGT 1948093
Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444
| |||||||| | | ||| | ||||| |||||||| |||||||||||||| |
Sbjct 1948092 CGGATTGCTGGCCTTGAGGTTGAAAGGATTATCAATGAACCGACAGCAGCTGCTCTGTCT 1948033
Query 451445 TATGGACTAGGAAAATCAAA 451464
||||| || ||| | ||||
Sbjct 1948032 TATGG--TATGAACAACAAA 1948015
>seq57
Length=1649376
Score = 105 bits (116), Expect = 3e-17
Identities = 152/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || || || || ||||| || || || |||||||| ||||| |||
Sbjct 1450106 ATGCAGATCTTTGTGAAGACGCTCACTGGAAAGACCATAACTCTTGAGGTTGAGAGCTCT 1450165
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | | || ||| || ||||| |||||||| || || ||||| ||
Sbjct 1450166 GACACCATTGATAATGTGAAGGCAAAGATCCAAGACAAGGAAGGCATCCCACCTGACCAG 1450225
Query 391170 CA-ACGTTTA-ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATA 391227
|| | | ||| |||| || || || || || || |||||| | || ||||| ||||| |
Sbjct 1450226 CAGAGGCTTATATTTGCT--GGAAAGCAGCTGGAGGATGGACGCACATTGGCTGATTACA 1450283
Query 391228 ATATTGATAAGGATGCAACACTTCACTTAGT 391258
|||| | ||||| | ||||||||||| ||
Sbjct 1450284 ATATCCAGAAGGAATCCACACTTCACTTGGT 1450314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975702578817500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |