Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq57 114 1e-20 >seq57 Length=1649376 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||||| | || | || || ||||| || ||||| || || ||||||||||| || Sbjct 1450332 CCTCCTCGAAGGCGAAGGACCAAGTGAAGTGTGGATTCCTTCTGGATATTGTAATCAGCC 1450273 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| ||||| || |||||||| | | ||| || || || || Sbjct 1450272 AATGTGCGTCCATCCTCCAGCTGCTTTCCAGCAAATATAAGCCTCTGCTGGTCAGGTGGG 1450213 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || ||||| || ||| || ||| | || | |||||||| | || || Sbjct 1450212 ATGCCTTCCTTGTCTTGGATCTTTGCCTTCACATTATCAATGGTGTCAGAGCTCTCAACC 1450153 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||||||| | || || || || | || || ||||| ||||||||| Sbjct 1450152 TCAAGAGTTATGGTCTTTCCAGTGAGCGTCTTCACAAAGATCTGCATG 1450105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396275381473125