Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20]
625 sequences; 243,174,629 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq5 114 1e-20
seq24 100 2e-16
seq49 89.7 4e-13
seq17 87.8 1e-12
seq165 86.0 5e-12
seq8 86.0 5e-12
seq4 86.0 5e-12
>seq5
Length=5556497
Score = 114 bits (126), Expect = 1e-20
Identities = 165/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 48535 CGTCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAAT 48594
|| ||||||| | || || | |||| || ||||| ||| || || || |||||||
Sbjct 4050166 CGCCGCCGCCGCGGAGGCGGAGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAAT 4050107
Query 48595 CAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG 48654
| | || | || |||| |||| |||||| ||||| || || || ||||| || ||||
Sbjct 4050106 CGGCCAGCGTGCGCCCGTCCTCCAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCG 4050047
Query 48655 TGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCT 48714
|| |||||||||||||| | ||| || || |||| | || |||| ||
Sbjct 4050046 GCGGGACGCCCTCCTTGTCCTGCACCTTGGCCTTCACGTTCGCCACCGTGTCCGACGGCT 4049987
Query 48715 CCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
||||||||| ||| ||||| || ||||||| || || || || |||||||||
Sbjct 4049986 CCACCTCCAGCGTGATCGTCTTGCCCGTCAGCGTCTTCACGAAGATCTGCATC 4049934
>seq24
Length=2721981
Score = 100 bits (110), Expect = 2e-16
Identities = 162/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597
|||| || | || || | ||||| || |||||| || || || |||||||| ||||
Sbjct 300583 CGCCTCCGCGGAGACGGAGCACCAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAG 300524
Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657
|| | || | || || | |||||| ||||| || || || ||||| || |||| |
Sbjct 300523 CGAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGTG 300464
Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717
| | |||||||||||| ||||| ||||| | | | || || | |||||
Sbjct 300463 GGATGCCCTCCTTGTCCTGGATCTTAGCCTTTACGTTGTCGATGGTGTCCGAGGACTCCA 300404
Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|||||| ||| || || || |||||||| || || || || ||||||||| ||
Sbjct 300403 CCTCCAACGTGATGGTCTTCCCCGTCAAGGTCTTCACGAAGATCTGCATCTTG 300351
>seq49
Length=1823295
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| ||||| |||| || |||| || || ||| ||| || || || ||||| ||||
Sbjct 157440 CCACCCCTCAGCCTCAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 157499
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | || |||| || | |||||| || ||||| || || ||||| || |||| |||
Sbjct 157500 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 157559
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| |||||||||||| ||||| || || | | | || || | ||| |||
Sbjct 157560 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGGACTCAACC 157619
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| ||||| || || || || | || || ||||| ||||||||
Sbjct 157620 TCCAGGGTAATAGTCTTCCCAGTGAGGGTCTTGACAAAGATCTGCAT 157666
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| ||||| |||| | ||||| || || ||| ||| || || || ||||| ||||
Sbjct 157895 CCACCCCTGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 157954
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | || |||| || | |||||| ||||| || || || ||||| || |||| |||
Sbjct 157955 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 158014
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| |||||||||||| |||||| || ||| | | | || || | |||||||
Sbjct 158015 ATGCCCTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACC 158074
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| | || || || || || || | || || || || ||||||||
Sbjct 158075 TCAAGAGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 158121
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | ||||| || || ||| || || ||||| ||||| || | || | ||
Sbjct 156993 AGACGAAGCACCAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGCCAGGGTACGT 157052
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| || ||||| ||||| ||||| || |||| || | |||||||
Sbjct 157053 CCATCCTCCAGCTGCTTGCCTGCAAAAATCAGACGCTGCTGGTCCGGTGGGATGCCCTCC 157112
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | ||||| | ||| ||||||| ||
Sbjct 157113 TTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCTGAAGACTCTACCTCCAAGGTG 157172
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || || | || || ||||| ||||||||
Sbjct 157173 ATAGTCTTCCCAGTGAGGGTCTTGACAAAGATCTGCAT 157210
>seq17
Length=3182705
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||| | || || || ||| || || || ||||| || | ||| | ||
Sbjct 3005496 AGGCGCAGCACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGG 3005555
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| || || || || || | ||| || |||| ||| | |||||||
Sbjct 3005556 CCATCCTCCAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCC 3005615
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| ||| || | | | | || || ||| ||||||| ||
Sbjct 3005616 TTGTCCTGGATCTTTGCTTTCACGTTATCAATGGTGTCGGAGCTCTCAACCTCCAGGGTG 3005675
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| ||||| || || ||||| ||||||||
Sbjct 3005676 ATGGTCTTTCCAGTCAAGGTCTTCACAAAGATCTGCAT 3005713
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
||| || || || |||| ||||| || || ||| ||| || || || ||||| ||||
Sbjct 3006626 GCCTCCTCTCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 3006685
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
|| | || |||| || | |||||| || || || || || | ||| || |||| |||
Sbjct 3006686 GAGGGTACGCCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGCCTCTGCTGGTCCGGGGG 3006745
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
| |||||||||||| ||||| || || | | | || || | ||||||
Sbjct 3006746 GATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCAC 3006805
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
||| | |||||| || || || || | || || || || |||||||||
Sbjct 3006806 CTCGAGCGTAATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATC 3006854
>seq165
Length=58862
Score = 86.0 bits (94), Expect = 5e-12
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | ||||| ||| || ||| ||| || || || ||||| || | || | ||
Sbjct 23335 AGGCGGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGG 23394
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | |||||| ||||| || || || ||||| || |||| || | |||||||
Sbjct 23395 CCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 23454
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | || || | ||||||||||| |||
Sbjct 23455 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTG 23514
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| || || ||||||| || || || || ||||||||| ||
Sbjct 23515 ATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 23556
>seq8
Length=4429347
Score = 86.0 bits (94), Expect = 5e-12
Identities = 160/235 (68%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 48535 CGTCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAAT 48594
|| ||||||| | || || | ||||| || ||||| ||| || || | ||||| |
Sbjct 2522495 CGCCGCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGACGTTGTAGT 2522436
Query 48595 CAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG 48654
| | || | || ||||| |||| |||||| |||||||| ||||| ||||| || ||||
Sbjct 2522435 CGGCCAGCGTGCGCTCGTCCTCCAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGCTCCG 2522376
Query 48655 TGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCT 48714
|| | | |||||||| |||||| || ||| | || | || | ||
Sbjct 2522375 GCGGGATACTTTCCTTGTCCTGGATCTTTGCCTTGACATTGGCGACGGTATCGCCGGTCT 2522316
Query 48715 CCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769
| ||||| | ||| | ||| ||||| ||| || || || || |||||||||||
Sbjct 2522315 CGACCTCGAGCGTCACCGTCTTTCCGATCAGCGTCTTCACGAAGATCTGCATCGT 2522261
>seq4
Length=5694366
Score = 86.0 bits (94), Expect = 5e-12
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | ||||| ||| || ||| ||| || || || ||||| || | || | ||
Sbjct 3329482 AGGCGGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGG 3329423
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | |||||| ||||| || || || ||||| || |||| || | |||||||
Sbjct 3329422 CCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 3329363
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | || || | ||||||||||| |||
Sbjct 3329362 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTG 3329303
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| || || ||||||| || || || || ||||||||| ||
Sbjct 3329302 ATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 3329261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380934698326875
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