Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq12 104 1e-17 >seq12 Length=3772834 Score = 104 bits (114), Expect = 1e-17 Identities = 157/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123 |||||||||| || |||||||||||||| || || | |||||| ||||||||||| | Sbjct 2780935 TACCTTTTCTCTTGCCTCCACCTTGATCAACATAACGTGCAGTATCATTGAAAACACGTA 2780876 Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183 ||| ||||| | ||| | ||| || || || | | || | ||| || | || Sbjct 2780875 GCATAGGAACAAGTCCGTTAGAAGTCCCATTAGTTCCTCGGATATAACTTCCAGTAGCTC 2780816 Query 26184 TAATATCGTGAGCATGA-ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCT 26242 ||||| ||| ||| ||||||||||| ||||| ||| || || ||||| || Sbjct 2780815 GAATATTATGA-ATTGAGATACCGATTCCTCCAGCAGTTTTGCTTATCGCAGCACATTCC 2780757 Query 26243 GAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 |||| ||||| ||||||| | || |||||| ||||||| Sbjct 2780756 GAAAGAGTATCATAAATTCCCTCAATACTATCATCTTTCAT 2780716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038072546875