Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq57 91.5 3e-13 >seq57 Length=1649376 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| |||||||| | || | || | ||| | ||| || ||| || || ||| Sbjct 1450563 ATCCCACCCCTAAGACGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCA 1450504 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | ||||| || |||| || | || || ||||||||||| | ||||| || || || Sbjct 1450503 GCCAATGTGCGCCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCCGGG 1450444 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 ||||| || || || || || || || || ||||| ||| | || || || Sbjct 1450443 GGTATACCCTCCTTGTCCTGGATCTTGGCCTTAACATTGTCTATCGTGTCAGAGCTCTCA 1450384 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||||||| || || || ||||| | || || | |||||||||||| Sbjct 1450383 ACCTCTAGAGTGATAGTCTTCCCAGTGAGAGTCTTCACAAATATCTGCAT 1450334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984472116468750