Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq15 340 2e-88 >seq15 Length=3529114 Score = 340 bits (376), Expect = 2e-88 Identities = 700/1039 (67%), Gaps = 23/1039 (2%) Strand=Plus/Minus Query 73364 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 73423 ||||| || | || || |||||| || || |||||||| || | |||||||| || Sbjct 3061865 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 3061806 Query 73424 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 73483 || || || || ||||||||||| | || | || |||||||| ||| |||||||| Sbjct 3061805 CTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTT 3061746 Query 73484 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAATTTTTTA 73543 || || || ||||| || ||||| | || || ||| | || || ||||| ||| Sbjct 3061745 GTAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTA 3061686 Query 73544 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTTTGGGGA 73603 || || ||||| || || |||| | || | | | || | | ||| | || |||||| Sbjct 3061685 ACGGCGGCAGTTTCCACCCCTGCTAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGA 3061626 Query 73604 CCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 73663 || || |||||||| ||| || || |||| |||||||| || || |||| ||||| Sbjct 3061625 CCGGAAGCACAAGGGGATTTTACTCGTTGGTGCCAATTAGGGGGTCTGTGGACTTTTGTC 3061566 Query 73664 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGC-AGG 73722 || | ||||| | |||| ||| |||||||||||| | | || ||||| |||| ||| Sbjct 3061565 GCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTAGG 3061506 Query 73723 ACTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCGCAGTATTCAC 73782 | |||| | || ||||| || ||| | | || || | ||||| || || Sbjct 3061505 TC-TGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCTGTTTTTGT 3061447 Query 73783 GAGCATCTTTCTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCACCTTCATTCGG 73842 | | || || || ||||| | ||||| | |||||||||| ||||| || || Sbjct 3061446 TTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCACCGAGTTTTGG 3061387 Query 73843 TGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAA 73902 || ||||| || ||||| | || | ||| | || || || || ||| || | || Sbjct 3061386 CGTAGCAGCTATATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAA 3061327 Query 73903 TCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACA 73962 || |||||||||||||| || || || || | |||| ||| | ||||| || || || Sbjct 3061326 CCCCTTTCATATGATGGGAGTTGCCGGAGTATTAGGTGCAGCTCTCCTATGCGCTATTCA 3061267 Query 73963 TGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGAT 74022 ||| || || || |||| ||| | ||| || || | ||| ||| Sbjct 3061266 TGGGGCTACTGT--AGAAAACACTCTAT---------TC-GAAGATGGTGATGGT----- 3061224 Query 74023 TCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTTATAGTATGAT 74082 | | || ||| |||| || | || || || | ||||| |||||| ||| | Sbjct 3061223 ----GCAAATACCTTCCGAGCTTTTAACCCCACTCAAGCGGAAGAAACTTATTCAATGGT 3061168 Query 74083 TACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTT 74142 || |||||| | || ||||| || || |||||| | || ||||| || ||| | | || Sbjct 3061167 CACCGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTT 3061108 Query 74143 ACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGT 74202 ||| ||| ||||| | || ||||| |||| ||| | |||| |||| || | || Sbjct 3061107 ACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGT 3061048 Query 74203 AGGTCTAGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGA 74262 || || || || ||||| | || || ||||| || || || || || | ||||| || Sbjct 3061047 TGGCCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGA 3060988 Query 74263 AGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGC 74322 ||| || || ||||| || |||||||| || || |||||| | || || ||||| | || Sbjct 3060987 AGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGC 3060928 Query 74323 ATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCC 74382 |||||| || || ||||| || ||||| || || | ||||| || || || | || Sbjct 3060927 GTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACC 3060868 Query 74383 ACGAGGCAACGCACTATAA 74401 ||| || ||||| || ||| Sbjct 3060867 ACGTGGAAACGCTCTTTAA 3060849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572869124425000