Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq57 82.4 6e-11 >seq57 Length=1649376 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || || || ||||| ||||| || | || ||| || Sbjct 1449422 ATGCAGATCTTCGTCAAGACGTTGACTGGCAAGACCATCACTCTTGAGGTAGAGACTTCG 1449481 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || || |||||| || || || ||| | ||| ||||| Sbjct 1449482 GATACTATTGATAATGTTAAGGCCAAGATTCAGGATAAGGAGGGCATCCCCCCAGATCAG 1449541 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || |||| ||| || || ||||| || |||| | | ||| |||| ||||||||| Sbjct 1449542 CAGAGGCTCATTTTTGCTGGCAAGCAGCTAGAAGATGGCCGTACATTGGCTGATTACAAC 1449601 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || || || ||||| | ||| | ||| Sbjct 1449602 ATCCAGAAGGAGTCTACTCTCCACCTTGTG 1449631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412838455308125