Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq22 95.1 2e-14 >seq22 Length=2792836 Score = 95.1 bits (104), Expect = 2e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 51967 TGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTAC 52026 |||||||| || | ||| | |||| |||||||||||||||||||||||||||||| | | Sbjct 2343700 TGAATTTGTCTGTCACTTCACCATACAATGCTGATTTTGATGGGGATGAAATGAATATGC 2343641 Query 52027 ATGTTCCTCAATCATATGGAGCTACTGCTGAA 52058 ||||||| || ||||||| ||| |||||| Sbjct 2343640 ATGTTCCCCAGTCATATGAGACTAGAGCTGAA 2343609 Score = 93.3 bits (102), Expect = 5e-14 Identities = 139/195 (71%), Gaps = 12/195 (6%) Strand=Plus/Minus Query 51870 GATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCATAAAGCTTCTAT------G 51923 ||||| ||| |||| || | ||| | ||||||| ||||||||| ||||| | Sbjct 2327203 GATGGGGATTATGTTCTTCTTAATCGACAACCAAGTCTTCATAAAATGTCTATCATGGGG 2327144 Query 51924 CAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAATGAATTTGGCTATGACT 51983 || || | ||| ||| | | || | || | ||| | |||||||| || | ||| Sbjct 2327143 CATCGTATCAAAATTA---TGC--CCTGCTCAA-CTTTTCGATTGAATTTGTCTGTCACT 2327090 Query 51984 AAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCATAT 52043 | |||| |||||||||||||||||||||||||||||| | |||||||| || || ||| Sbjct 2327089 TCACCATACAATGCTGATTTTGATGGGGATGAAATGAATATGCATGTTCCCCAGTCTTAT 2327030 Query 52044 GGAGCTACTGCTGAA 52058 | ||| |||||| Sbjct 2327029 GAGACTAGAGCTGAA 2327015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635172637675000