Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq15 518 4e-142 seq72 125 9e-24 >seq15 Length=3529114 Score = 518 bits (574), Expect = 4e-142 Identities = 721/1005 (72%), Gaps = 4/1005 (0%) Strand=Plus/Minus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 ||||||||||| | | |||| || || || ||||| || ||||| || || | || Sbjct 3061855 TGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCT 3061796 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||||||| | || | || |||||| |||| ||||| ||||||| || || Sbjct 3061795 TTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTT 3061736 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCT 182549 |||| ||||| || | ||| ||||||| | |||||| || ||||||| |||| || Sbjct 3061735 GGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACGGCGGCA 3061677 Query 182550 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 182609 || || || |||||| || | | | || ||| | | ||||| ||||| || || | Sbjct 3061676 GTTTCCACCCCTGCTAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGACCGGAAGCA 3061617 Query 182610 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 182669 || ||| |||| || ||||||||| | ||||| || |||| ||| || |||||||| Sbjct 3061616 CAAGGGGATTTTACTCGTTGGTGCCAATTAGGGGGTCTGTGGACTTTTGTCGCTCTCCAT 3061557 Query 182670 GGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGG 182728 || || || || || || ||||||||| | | ||||||||||||||| | ||| || Sbjct 3061556 GGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTAGGTCTG-TTCA 3061498 Query 182729 AATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTT 182788 | | | ||||| ||||| ||| | || |||||||| || ||||| || || || || Sbjct 3061497 ATTGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCTGTTTTTGTTTCCGTATT 3061438 Query 182789 CCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGC 182848 ||| || ||||| ||||||| || |||||| || || ||| ||||| || || || Sbjct 3061437 CCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCACCGAGTTTTGGCGTAGCAGC 3061378 Query 182849 GATCTTCAGGTTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCCA 182908 || || | ||| | | ||| | || || || || || ||||| | |||||||| || Sbjct 3061377 TATATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCCTTTCA 3061318 Query 182909 TATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCAC 182968 ||||||||||||||| || || | |||| ||| || || | ||||| ||||| | || Sbjct 3061317 TATGATGGGAGTTGCCGGAGTATTAGGTGCAGCTCTCCTATGCGCTATTCATGGGGCTAC 3061258 Query 182969 AGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATTC 183028 ||||| || || | | |||||||| || ||||| || || ||| || | | Sbjct 3061257 TGTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGAGCTTTTAACCC 3061198 Query 183029 CACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCTT 183088 |||||| | ||| || || ||||| ||||| || || || || |||||||| |||||||| Sbjct 3061197 CACTCAAGCGGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTT 3061138 Query 183089 CGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCAT 183148 || ||||| ||| |||||| |||||||| || ||||||||| | ||||| || |||| Sbjct 3061137 TGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCAC 3061078 Query 183149 GGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGA 183208 ||| | ||| | | ||||||| | |||| || ||||| || || ||||| ||||| Sbjct 3061077 CGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGA 3061018 Query 183209 TTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAAA 183268 || || || || || | ||||| ||||||||||| || ||||| |||||||| || Sbjct 3061017 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 3060958 Query 183269 GAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACATGA 183328 || || ||| | || || || | ||||| ||| ||||| || ||||| || ||||| Sbjct 3060957 AAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGA 3060898 Query 183329 AAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 ||| | || |||||||| || |||||||| | || ||||| || Sbjct 3060897 AAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 3060853 >seq72 Length=1231634 Score = 125 bits (138), Expect = 9e-24 Identities = 197/278 (71%), Gaps = 3/278 (1%) Strand=Plus/Plus Query 182611 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACG 182670 |||||| ||| | || ||||||||| | ||||| || |||| ||| || |||||||| | Sbjct 291130 AGGGGATTTTACT-CGTTGGTGCCAATTAGGGGGTCTGTGGACTTTTGTCGCTCTCCATG 291188 Query 182671 GTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCT-CGCCTGATTGGA 182729 | || || || || || ||||||||| | | ||||||||||||||| | ||| || | Sbjct 291189 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTAGGTCTG-TTCAA 291247 Query 182730 ATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTC 182789 | | ||||| ||||| ||| | || | |||||| || ||||| || || || ||| Sbjct 291248 TTGCGGCCTTATAATGCAATTTCATTCTTTGGTCCAATCGCTGTTTTTGTTTCCGTATTC 291307 Query 182790 CTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCG 182849 || || ||||| ||||||| || |||||| || || ||| | ||| || || || Sbjct 291308 CTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCACCGAGTTCTGGCGTAGCAGCT 291367 Query 182850 ATCTTCAGGTTCCTGTTGTTCCTTCAGGGTTTCCACAA 182887 || || | ||| | | ||| | || || || || || Sbjct 291368 ATATTTTGATTCATCCTTTTCTTCCAAGGATTTCATAA 291405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614612798300000