Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq153 82.4 7e-11 seq61 82.4 7e-11 >seq153 Length=68039 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || ||||| |||||| | ||||| |||| || ||||||||||| || || || | Sbjct 54966 ACTTGAGCAATCATGCATGTGAGAAGAGAATATGATGCAATGTTGAATGGAACTCCAAGA 55025 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 |||||||| | || |||||||| | |||||| || |||||||| ||| | || || || Sbjct 55026 CCCATGTCAGCAGAGCGTTGATACATCTGGCACGATAGCTCCCCGTTCTCAACATAAAAC 55085 Query 6737 TGG 6739 ||| Sbjct 55086 TGG 55088 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 34606 CCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACAT 34665 ||| || || || | ||| |||||||| || |||||| | |||||||| || | ||||| Sbjct 55088 CCAGTTTTATGTTGAGAACGGGGAGCTATCGTGCCAGATGTATCAACGCTCTGCTGACAT 55029 Query 34666 GGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||| | || || || ||||||||||| || |||| ||||| | |||||| ||||| Sbjct 55028 GGGTCTTGGAGTTCCATTCAACATTGCATCATATTCTCTTCTCACATGCATGATTGCTCA 54969 Query 34726 TGT 34728 || Sbjct 54968 AGT 54966 >seq61 Length=1472992 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 34606 CCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACAT 34665 ||| || || || | ||| |||||||| || |||||| | |||||||| || | ||||| Sbjct 352336 CCAGTTTTATGTTGAGAACGGGGAGCTATCGTGCCAGATGTATCAACGCTCTGCTGACAT 352395 Query 34666 GGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||| | || || || ||||||||||| || |||| ||||| | |||||| ||||| Sbjct 352396 GGGTCTTGGAGTTCCATTCAACATTGCATCATATTCTCTTCTCACATGCATGATTGCTCA 352455 Query 34726 TGT 34728 || Sbjct 352456 AGT 352458 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || ||||| |||||| | ||||| |||| || ||||||||||| || || || | Sbjct 352458 ACTTGAGCAATCATGCATGTGAGAAGAGAATATGATGCAATGTTGAATGGAACTCCAAGA 352399 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 |||||||| | || |||||||| | |||||| || |||||||| ||| | || || || Sbjct 352398 CCCATGTCAGCAGAGCGTTGATACATCTGGCACGATAGCTCCCCGTTCTCAACATAAAAC 352339 Query 6737 TGG 6739 ||| Sbjct 352338 TGG 352336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448258897950000