Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq11 84.2 2e-11 >seq11 Length=23014695 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||| | || | ||||||||| |||||||| ||||| || || | Sbjct 13890107 ACATGAGCAATCATGTATGTCAGAAGAGAATATGATGCAATGTTGAATGGAACACCAAGT 13890048 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCC-ATCACAGACATAAAA 101874 ||||||||||| || | |||||||| || || || |||| || || || |||||||| Sbjct 13890047 CCCATATCAGCAGAGCGTTGATACATCTGGCACGATAGCTCCCCGCTCTCA-ACATAAAA 13889989 Query 101875 TTG 101877 || Sbjct 13889988 CTG 13889986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251147167012