Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq8 93.3 5e-14 >seq8 Length=22678724 Score = 93.3 bits (102), Expect = 5e-14 Identities = 137/192 (71%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 151003 GCGGC--CGCCG-TCTTCATGGGCCCCATCTACTACCTGCGGCTGCGGCACCTCACGCAG 151059 ||||| ||||| | |||| || || | | ||||| |||||| | ||| | | || Sbjct 3392449 GCGGCGTCGCCGGTGTTCACCGGGCCGACGTTCTACCAGCGGCTCCACCACATGGCCGAG 3392390 Query 151060 GACAAGGCCACGGTGCGCTGCCGCGGCAAGAAGACCAAGCTGATCCGGCAGGCCAACGAG 151119 ||||||| || | | || | |||| | | | ||||| |||||| | ||| Sbjct 3392389 GACAAGGTCAAGTTCCGGAACACCGGCCCGGTGCACCCGCTGACGCGGCAGCCGGTGGAG 3392330 Query 151120 GGCCGCAAGCGAGGCGGCGGCATCAAGTTCGGCGAGATGGAGCGCGACTGCCTCATCGCG 151179 | |||| || ||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 3392329 GACCGCCGCCGGTACGGCGGCGTCAAGTTCGGCGAGATGGAGCGCGACTGCCTCCTCGCC 3392270 Query 151180 CACGGCGCGGCC 151191 |||||||| ||| Sbjct 3392269 CACGGCGCCGCC 3392258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608796708680480