Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08]
12 sequences; 308,272,304 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq5 82.4 6e-11
>seq5
Length=24206129
Score = 82.4 bits (90), Expect = 6e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
||||||||| |||||||| || | || || |||||||||||| | || |||||
Sbjct 7376667 AATGCAAATCTTTGTCAAGACATTGACCGGCAAAACCATTACCTTGGAGGTTGAGTCGTC 7376608
Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
||||| || ||||| || ||| ||| ||| || || || ||| | ||| ||||
Sbjct 7376607 GGACACAATT-GACAACGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCCCCGGATC 7376549
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
|||| |||| || | ||| ||||| || | || |||| | ||| | || | ||| |
Sbjct 7376548 AGCAGCGACTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCTTAGCAGGTTACA 7376489
Query 115464 ACATTCAAAAAGAGTCTAC 115482
|||| || || ||||| ||
Sbjct 7376488 ACATCCAGAAGGAGTCCAC 7376470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425343937793440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |