Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq6 136 3e-27 seq5 114 1e-20 seq8 111 1e-19 seq4 105 6e-18 seq2 104 2e-17 seq1 102 7e-17 >seq6 Length=25711811 Score = 136 bits (150), Expect = 3e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271 |||| ||||||| || ||||| || || | || || || || |||| || || || || Sbjct 22964235 TGTACAGATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATCACCCTCGAGGTTGA 22964176 Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331 || | ||||| | ||| || | || || ||||| ||||||||||| |||||||| Sbjct 22964175 GTCCTCTGATACAATTGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCACC 22964116 Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391 || || |||||||| || ||||| ||||| || |||||||| ||||||| || | || Sbjct 22964115 TGACCAGCAACGTCTCATCTTTGCTGGCAAGCAACTAGAGGATGGCCGCACCCTCGCGGA 22964056 Query 22392 TTACAACATTCAAAAAGAATCCACC 22416 ||||||||| || || || |||||| Sbjct 22964055 TTACAACATCCAGAAGGAGTCCACC 22964031 Score = 113 bits (124), Expect = 4e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | ||||| || || |||| || || || || || Sbjct 23416151 AGATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCT 23416210 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| | ||| || |||| || || || ||||||||||| || || || || | Sbjct 23416211 CGGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACC 23416270 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| || || || ||||| ||| | |||||| ||||||| | |||| |||| Sbjct 23416271 AGCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCCGACTACA 23416330 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || || || |||||| Sbjct 23416331 ACATCCAGAAGGAGTCCACC 23416350 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || |||||||||| || || || | Sbjct 22964000 ATGCAGATCTTTGTGAAGACCTTGACAGGAAAGACCATCACTCTTGAGGTCGAGTCCTCG 22963941 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | ||| || | || || ||||| ||||||||||| ||||| || || || Sbjct 22963940 GACAAGATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAG 22963881 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||| | |||||| || || | | ||||||||| Sbjct 22963880 CAGCGCCTCATCTTTGCAGGCAAGCAGCTCGAGGATGGACGTACACTGGCTGATTACAAC 22963821 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || |||||| Sbjct 22963820 ATTCAGAAGGAGTCCACC 22963803 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| ||||| || || || | Sbjct 23416541 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACGCTTGAGGTCGAGTCCTCG 23416600 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| || || || || || Sbjct 23416601 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGNATCCCCCCGGACCAG 23416660 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | |||||| ||||||| | | || |||||| Sbjct 23416661 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCTTGGCTGACTACAAC 23416720 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 23416721 ATCCAGAAGGAGTCCACC 23416738 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | || || || || | || ||||| || || | | Sbjct 23416768 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATTACCCTTGAGGTTGAGTCGTC 23416827 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| || | ||| | | || || || || ||||||||||| || || || || || Sbjct 23416828 CGACACTATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 23416887 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || ||||| || ||||| || || ||| | |||||| ||||||| | | |||||||| Sbjct 23416888 GCAGCGTCTGATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTTGCGGATTACAA 23416947 Query 22398 CATTCAAAAAGAATCCAC 22415 ||| || || || || || Sbjct 23416948 CATCCAGAAGGAGTCAAC 23416965 >seq5 Length=24206129 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || ||||| ||||| | || | || || || | | Sbjct 7376666 ATGCAAATCTTTGTCAAGACATTGACCGGCAAAACCATTACCTTGGAGGTTGAGTCGTCG 7376607 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | ||| ||| ||||| ||||||||||| ||||| || ||||| Sbjct 7376606 GACACAATTGACAACGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAG 7376547 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||| | |||||| ||||||| | | | ||||||| Sbjct 7376546 CAGCGACTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCTTAGCAGGTTACAAC 7376487 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 7376486 ATCCAGAAGGAGTCCACC 7376469 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 22204 TATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTT 22263 |||||||| | ||||||| || ||||| || ||| | || || || || | || ||| Sbjct 19880366 TATACATTCTTGCAGATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACCATAACCCTT 19880425 Query 22264 GAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGT 22323 || || || || | |||||| | ||| || | || || || || ||||||||||| Sbjct 19880426 GAGGTTGAGTCCTCGGATACCATTGACAATGTAAAGGCCAAGATCCAGGACAAGGAGGGA 19880485 Query 22324 ATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACC 22383 || ||||| || || || ||||| || || || ||||| ||| | || ||| ||||| Sbjct 19880486 ATCCCACCGGACCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAAGATGGGCGCACG 19880545 Query 22384 GTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 | | || |||||||| || || ||||||||| Sbjct 19880546 CTTGCTGACTACAACATCCAGAAGGAATCCACC 19880578 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || | ||||| || || || | | || Sbjct 19881293 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATTACTCTGGAGGTTGAGAGCTCC 19881352 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || || || || |||||||| |||||||| || || || Sbjct 19881353 GATACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCCCCAGACCAG 19881412 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | || ||| ||| ||| || |||| |||||| Sbjct 19881413 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTCGCCGACTACAAC 19881472 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || || ||| Sbjct 19881473 ATTCAGAAGGAGTCTACC 19881490 Score = 102 bits (112), Expect = 7e-17 Identities = 145/205 (71%), Gaps = 7/205 (3%) Strand=Plus/Minus Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271 |||| ||||||| || ||||| || || | || || || || | | | || || Sbjct 7377352 TGTACAGATGCAGATCTTTGTGAAGACACTCACTGGCAATAC-------CATAAGGTTGA 7377300 Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331 || | || || | ||| || |||| || ||||| |||||||||||||||||||| Sbjct 7377299 GTCCTCTGACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCACC 7377240 Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391 | || || || || || ||||| ||||| || | ||||| |||||| || | || Sbjct 7377239 TAACCAGCAGCGCCTCATCTTTGCGGGCAAGCAACTTGAGGACGGACGCACCCTCGCAGA 7377180 Query 22392 TTACAACATTCAAAAAGAATCCACC 22416 |||||||||||| ||||| |||||| Sbjct 7377179 TTACAACATTCAGAAAGAGTCCACC 7377155 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || || || || || |||| ||||| || || | | Sbjct 19880609 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTTGAGTCTTCT 19880668 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | | || ||| || || ||||||||||| ||||| || || || Sbjct 19880669 GATACTATTGACAACGTTAAGGCAAAGATCCAGGACAAGGAGGGGATTCCCCCGGACCAG 19880728 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | |||||| | ||| | | || |||||| Sbjct 19880729 CAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTAGGACCCTTGCTGACTACAAC 19880788 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 19880789 ATCCAGAAGGAGTCCACC 19880806 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || | || ||||| || || | | Sbjct 19880837 ATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCATCA 19880896 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| ||||| || || || Sbjct 19880897 GACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 19880956 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||||||||| ||| | |||||| | | ||| || | || |||||| Sbjct 19880957 CAGCGTCTTATTTTTGCCGGCAAGCAGCTGGAGGATGGCAGGACCCTCGCTGACTACAAC 19881016 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 || || || || |||||| | || | ||| |||| Sbjct 19881017 ATCCAGAAGGAGTCCACCCTTCACCTTGTTCTGCG 19881051 >seq8 Length=22678724 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| ||||| | ||||| || | |||| ||||| ||||| | Sbjct 3995921 AGATGCAGATCTTTGTGAAAACCCTGACCGGCAAGTCCATCACCCTTGAGGTGGAGTCAT 3995862 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||| ||| | ||| || | || || || || || |||||||| ||||| || || | Sbjct 3995861 CCGACACCATCGACAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCGGACC 3995802 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || || || ||||||||||| ||| | ||||| |||||| | | || |||| Sbjct 3995801 AGCAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGAAGGACGCACCCTTGCTGACTACA 3995742 Query 22397 ACATTCAAAAAGAATCCACCATACAT 22422 ||||||| || || || ||| | ||| Sbjct 3995741 ACATTCAGAAGGAGTCGACCCTCCAT 3995716 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || ||| | ||||| || | |||| || || ||||| | Sbjct 3985447 AGATGCAGATCTTTGTGAAGACTCTGACCGGCAAGTCCATCACCCTCGAGGTGGAGTCAT 3985388 Query 22277 CCGATACCGTGGACGATATCAAACA--------AAAAATTCAAGACAAGGAGGGTATTCC 22328 |||| ||| | ||| || | || || ||| || || ||||||||||| ||||| Sbjct 3985387 CCGACACCATCGACAATGTGAAGCAGTGAAGGTAAAGATCCAGGACAAGGAGGGCATTCC 3985328 Query 22329 ACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTC 22388 || || || || || || || || ||||| || ||| | ||||| |||| | | | Sbjct 3985327 TCCGGACCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAGGAAGGACGCAACCTTGC 3985268 Query 22389 CGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || ||||| ||||| ||||| |||||| | ||| Sbjct 3985267 TGACTACAAAATTCAGAAAGAGTCCACCCTCCAT 3985234 >seq4 Length=27574323 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | ||||| || || | || || || || || || || Sbjct 24792420 ATGCAAATATTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCCTCC 24792479 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || ||||||||||| || ||||| || || Sbjct 24792480 GACACGATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAG 24792539 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || || ||| | |||||| ||||||| | | || |||||| Sbjct 24792540 CAGCGTCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAAC 24792599 Query 22399 ATTCAAAAAGAATCCACC 22416 || ||||| ||||||||| Sbjct 24792600 ATCCAAAAGGAATCCACC 24792617 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || ||| |||| | || || || || | Sbjct 24792648 ATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACGATCACCTTGGAGGTTGAGTCCTCT 24792707 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || |||||||||||||||||||| || || Sbjct 24792708 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 24792767 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | |||||| |||||| | | ||||||||| Sbjct 24792768 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCAGATTACAAC 24792827 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||||| | || | || |||| | || |||||| Sbjct 24792828 ATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTTCGTGGAGGT 24792875 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || ||||| || | || || || || |||| | || || || || Sbjct 24792190 AGATGCAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTCCT 24792249 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 ||||||| | ||| || | || || ||||| ||||||||||| || || || || | Sbjct 24792250 CCGATACGATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCAGACC 24792309 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | ||||| ||||| || || ||||| ||| | |||||| || || || | ||||| | Sbjct 24792310 AGCAACGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACTCTCGCGGATTATA 24792369 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || || || |||||| Sbjct 24792370 ACATCCAGAAGGAGTCCACC 24792389 >seq2 Length=31686972 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || ||| | ||||| || || |||| ||||| ||||| | Sbjct 3057018 AGATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACTATCACCCTTGAGGTGGAGTCTT 3056959 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| | ||| | |||| || || || ||||||||||| || || || || | Sbjct 3056958 CTGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACC 3056899 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| || || || ||||| ||| | |||||| | | ||| | | || |||| Sbjct 3056898 AGCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCTGACTACA 3056839 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || || || |||||| Sbjct 3056838 ACATCCAGAAGGAGTCCACC 3056819 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || || ||||| | || || || | | | Sbjct 3056233 ATGCAGATCTTCGTGAAGACCTTGACTGGGAAGACCATCACTTTGGAGGTTGAGAGCTCT 3056174 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || || ||||||||||| ||||| || || || Sbjct 3056173 GACACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATTCCCCCAGACCAG 3056114 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| |||||| || |||| |||||| Sbjct 3056113 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGACGCACCCTCGCCGACTACAAC 3056054 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 3056053 ATCCAGAAGGAGTCCACC 3056036 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || | | | Sbjct 3056461 ATGCAGATCTTTGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTTGAGAGCTCG 3056402 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| || || || || || Sbjct 3056401 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 3056342 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | |||||| ||||||| || | || |||||| Sbjct 3056341 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCGCTGACTACAAC 3056282 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 3056281 ATCCAGAAGGAGTCTACC 3056264 >seq1 Length=36915442 Score = 102 bits (112), Expect = 7e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || || || | || || || ||| |||| || || ||||| || Sbjct 10947153 AAGATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGTCC 10947094 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | ||| | | || || || || ||||||||||| || || ||||| Sbjct 10947093 TCGGACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGAC 10947034 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || || || || |||||||| ||| | ||||| |||||| || |||| ||| Sbjct 10947033 CAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTAC 10946974 Query 22396 AACATTCAAAAAGAATCCACC 22416 ||||| || || || || ||| Sbjct 10946973 AACATCCAGAAGGAGTCGACC 10946953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727938614780