Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq6 196 5e-45 seq5 134 1e-26 seq2 125 7e-24 seq8 107 2e-18 seq1 107 2e-18 seq4 104 2e-17 >seq6 Length=25711811 Score = 196 bits (216), Expect = 5e-45 Identities = 356/512 (70%), Gaps = 22/512 (4%) Strand=Plus/Minus Query 47075 CGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGT-CACTCTGG 47133 ||||||| | |||||||| ||||||||| | || || || || | || | | Sbjct 7420998 CGTGCGCCGCAAGGCCGACTGGGCCATGCGCTGGATCGA---CGGTGGCGAGCGCT-TCG 7420943 Query 47134 CCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTT-TGCG 47192 |||| || | |||| |||||| ||||||||| |||||||||||||| ||| |||| Sbjct 7420942 CCGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTCCTTCTGCG 7420883 Query 47193 GCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTA 47252 | || || | | || | || | ||||| |||||||| || ||||||||| Sbjct 7420882 CC-ATCTTCTGGCTCAAGAAGCGGGGGCTCATGCCGGGCCTCACCTTCTCCAACGAGCTC 7420824 Query 47253 ATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTC 47312 ||||| | ||||| ||||||||| | |||| ||||| ||| |||| || || || Sbjct 7420823 ATCTCCCGCGACGAGGGCCTGCACTGCGACTTCGCCTGCCTCCTCTACGAC-CTCC--TC 7420767 Query 47313 GATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAG 47372 ||| | |||| | | |||| |||| || | ||||| ||||||| ||| ||| Sbjct 7420766 CGCGGCAAGCTCGACGAGGCGCGCGTCCGCGAGATCGTCGCCGACGCCGTCGACATCGAG 7420707 Query 47373 ATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATG 47432 | |||||| || ||| || || |||| | | || || ||||||| || | ||| Sbjct 7420706 AGGGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGCATGAACGGCGACCTCATG 7420647 Query 47433 AGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGT-----TCAGCT-AAAGTATCCC 47486 || ||||||||||||| |||||||||||||| ||| | || ||| ||| Sbjct 7420646 AGCCAGTACATCGAATTCGTCGCCGACCGCCTCCTCATGGCACTCGGCTGCAAG------ 7420593 Query 47487 AAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAG 47546 ||||| ||| || || || || ||||| | ||| | ||| || || |||||||| Sbjct 7420592 AAGATGTACAACGTCGCCAACCCCTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAG 7420533 Query 47547 ACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 |||||||| |||||||||||||||||||| || Sbjct 7420532 ACCAACTTCTTCGAGAAGCGCGTCGGCGACTA 7420501 Score = 156 bits (172), Expect = 4e-33 Identities = 253/362 (70%), Gaps = 3/362 (1%) Strand=Plus/Plus Query 47217 GGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCAC 47276 ||| | ||||| |||||||| || ||||||||| ||||| | ||||| || || ||| Sbjct 1225252 GGACTCATGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGTCTCCAC 1225311 Query 47277 ACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCGATCAAAAGTTGGACGTGCCCACC 47336 | |||| ||||| ||| |||| || || || ||| | |||| | | | Sbjct 1225312 TGCGACTTCGCCTGCCTCCTCTACGAC-CTCC--TCCGCGGCAAGCTCGACGAGTCACGC 1225368 Query 47337 GTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTG 47396 ||| || || | ||||| ||||| | ||| |||| |||||| || ||| || || Sbjct 1225369 GTCCAGGAGATCGTCGCCGACGCCGTGGACATCGAGAGGGAGTTCGTCTGCGACGCGCTC 1225428 Query 47397 CCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCC 47456 |||| | | || || ||||||| ||| | ||||| |||||||||| || |||||| Sbjct 1225429 CCCGTCGCGCTCGTCGGGATGAACGGCGAGCTCATGAGCCAGTACATCGAGTTCGTCGCC 1225488 Query 47457 GACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAG 47516 ||||| |||||| | ||| || ||||| ||| || || || || ||||| Sbjct 1225489 GACCGGCTGCTCATGGCGCTCGGGTGCAAGAAGATGTACAACGTCGCCAACCCGTTCGAC 1225548 Query 47517 TTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAA 47576 | ||| | ||| || || |||||||||||||||| |||||||||||||||||||| Sbjct 1225549 TGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAC 1225608 Query 47577 TA 47578 || Sbjct 1225609 TA 1225610 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| ||| ||||| ||| || ||||| || ||| Sbjct 23416349 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 23416290 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 23416289 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 23416230 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||||| ||| || |||| ||| | || |||||||| || || Sbjct 23416229 ACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 23416170 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 23416169 TTCACAAAGATCTGCAT 23416153 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || |||||||| | Sbjct 23416995 CCACCACGGAGGCGGAGCACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAATCCGCA 23416936 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || ||||| |||||| |||||||| || || || Sbjct 23416935 AGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 23416876 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| ||| ||| | |||| || | ||||| | ||| || Sbjct 23416875 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCAATAGTGTCGGACGACTCAAC 23416817 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| ||||| || || || || |||||||| Sbjct 23416816 CTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 23416769 Score = 104 bits (114), Expect = 2e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || ||| ||||| ||| || ||||| || || Sbjct 23416737 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCG 23416678 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 23416677 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATNCCCTCCTTGTCCTGGATCTTGGCCTTC 23416618 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| ||||||| |||||| || | || | || ||||||||||| || Sbjct 23416617 ACGTTGT-CGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGT 23416559 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 23416558 CTTGACGAAGATCTGCAT 23416541 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || ||||| |||||||| || Sbjct 22963774 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCC 22963833 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || || || |||| | |||||||| || || || Sbjct 22963834 AGTGTACGTCCATCCTCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 22963893 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| || ||| ||| | | |||| |||||| |||||| Sbjct 22963894 ATTCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATCTTGTCCGAGGACTCGACC 22963953 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | || || || |||| || || ||||| ||||||||| || Sbjct 22963954 TCAAGAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCATGCCT 22964004 >seq5 Length=24206129 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| |||| |||||||| || ||||| ||||| || | | ||||| ||| || Sbjct 19881274 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTC 19881215 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || |||||| |||| | || |||||| || || || ||||||||||| ||| Sbjct 19881214 CAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTG 19881155 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| ||| ||| | ||||| ||| |||||| | ||||| || || | ||| | || | Sbjct 19881154 GATCTTCGCCTTCACGTTGT-CGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATAGTCT 19881096 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || ||||| || || ||||||||||| Sbjct 19881095 TGCCAGTGAGAGTCTTGACGAAAATCTGCAT 19881065 Score = 111 bits (122), Expect = 1e-19 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||| | | | ||||| ||| || ||||| || ||| Sbjct 7376470 GTGGACTCCTTCTGGATGTTGTAACCTGCTAAGGTGCGGCCATCCTCGAGCTGCTTGCCA 7376529 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT- 127035 || |||||| |||||||||||| || || ||||||||||||||| ||| | | ||||| Sbjct 7376530 GCAAAGATCAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCC-TGAATCTTTGCTTT 7376588 Query 127036 -GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 |||| || | ||||||| ||| || || | ||| | ||||||||||||| | Sbjct 7376589 CACGTTG-TCAATTGTGTCCGACGACTCAACCTCCAAGGTAATGGTTTTGCCGGTCAATG 7376647 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || ||||| || ||||| Sbjct 7376648 TCTTGACAAAGATTTGCAT 7376666 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || ||||| || | | |||||| ||| || ||||| || ||| Sbjct 19880577 GTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCA 19880518 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 19880517 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTT 19880458 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||| |||| ||| || || | ||| | || ||||| || ||||| Sbjct 19880457 ACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTC 19880398 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 19880397 TTCACAAAGATCTGCAT 19880381 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || |||||||| || ||| ||||| || | |||| || || Sbjct 7376698 GTAGACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTTGAGCTACTTGCCG 7376757 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || | || ||||||||||||||| || ||| ||| Sbjct 7376758 GCGAAGATGAGGCGCTGCTGGTCCGCGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTC 7376817 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| || || | | |||||| || | || | || || ||||| || || Sbjct 7376818 ACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCTTTCCGGTTAGGGTC 7376877 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || ||||||||||||||| || Sbjct 7376878 TTGACAAAAATCTGCATGCCT 7376898 Score = 82.4 bits (90), Expect = 7e-11 Identities = 141/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | || | | ||| || ||||| || ||| Sbjct 19880805 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCA 19880746 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| |||||||| || || || || |||||||||||| ||| || ||| Sbjct 19880745 GCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTA 19880686 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | || || | | ||| || || | ||| | || ||||| |||| || Sbjct 19880685 ACGTTG-TCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGT 19880627 Query 127096 TTTTACAAAAATCTGCATGGCT 127117 || ||||| || |||||| || Sbjct 19880626 CTTGACAAAGATTTGCATGCCT 19880605 >seq2 Length=31686972 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | |||||||| || || || ||||| || | Sbjct 3056235 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCG 3056294 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || || ||| |||| | |||||||| || || || Sbjct 3056295 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 3056354 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||||| |||| |||| |||||||| ||||| || Sbjct 3056355 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TCGATGGTGTCCGAGCTCTCAAC 3056413 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| || || || || ||||| |||||||| Sbjct 3056414 CTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3056461 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | || | ||| || ||||| || ||| Sbjct 3056820 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 3056879 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 3056880 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 3056939 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | | ||| || || | ||| | || |||||||||||||| Sbjct 3056940 ACGTTG-TCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAGAGT 3056998 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 3056999 CTTGACAAAGATCTGCAT 3057016 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || ||||| ||| | Sbjct 3056007 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3056066 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || |||||| |||||| |||||||| || || || Sbjct 3056067 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 3056126 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||| | | || | |||||| | ||||| || Sbjct 3056127 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCAGAGCTCTCAACC 3056186 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| || || || || |||||||| Sbjct 3056187 TCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 3056233 Score = 91.5 bits (100), Expect = 1e-13 Identities = 98/127 (77%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 126989 CGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGAC 127047 |||||||| || || || ||||||||||||||| ||| || ||||| |||| |||| Sbjct 3056664 CGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TCGAT 3056722 Query 127048 GGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAAT 127107 |||||| | | || || |||| ||| | || ||||||||||| || || ||||| || Sbjct 3056723 GGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGTGTCTTGACAAAGAT 3056782 Query 127108 CTGCATG 127114 ||||||| Sbjct 3056783 CTGCATG 3056789 >seq8 Length=22678724 Score = 107 bits (118), Expect = 2e-18 Identities = 146/205 (71%), Gaps = 8/205 (4%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| ||||| ||||| || | | |||| || || ||||| || || Sbjct 3985241 GTGGACTCTTTCTGAATTTTGTAGTCAGCAAGGTTGCGTCCTTCCTCGAGCTGCTTACCG 3985300 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTT------- 127029 ||| |||| | |||||||| || ||||| ||||||||||||||| ||| || Sbjct 3985301 GCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTTACCTTC 3985360 Query 127030 -CTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGG 127088 |||||| | | |||| |||||| | ||| || |||| ||| | | ||||||| Sbjct 3985361 ACTGCTTCACATTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGATGGACTTGCCGG 3985420 Query 127089 TCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||| || ||||| |||||||| Sbjct 3985421 TCAGAGTCTTCACAAAGATCTGCAT 3985445 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| || | | ||||| || || ||||| || || Sbjct 3995723 GTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCG 3995782 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || || || ||||||||||| ||| ||| ||| ||| Sbjct 3995783 GCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGCCTTC 3995842 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || || | ||| | | ||||||||||| ||| Sbjct 3995843 ACATTGTCGATGGTGTCGGATGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTT 3995902 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 3995903 TTCACAAAGATCTGCAT 3995919 >seq1 Length=36915442 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || ||||| | || | ||||| || | || ||||| || || || ||||| ||| Sbjct 10946921 GCGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 10946980 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | ||||| || || ||||| || || ||| |||| | |||||||| ||||| Sbjct 10946981 GCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGC 10947040 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062 || || |||||||||||| ||| ||| ||| | |||| |||| |||||||| ||| Sbjct 10947041 GGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTC 10947099 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | || | ||| || || ||||| || || || || |||||||| Sbjct 10947100 CACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 10947150 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | || | ||||| || | ||| ||||| || || || ||||| ||| || Sbjct 21234750 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 21234691 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | |||||||| || || || Sbjct 21234690 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 21234631 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| | ||| ||||| | | || ||||| | ||||| || Sbjct 21234630 ATCCCCTCCTTGTCCTGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACC 21234571 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || ||||| || || || || |||||||| Sbjct 21234570 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 21234524 >seq4 Length=27574323 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| | | |||||| ||| || ||||| || ||| Sbjct 24792844 GTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCA 24792785 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 24792784 GCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTGGCCTTC 24792725 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | ||| || || | ||| | ||| ||||| || || || Sbjct 24792724 ACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTGCCAGTAAGGGTC 24792665 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 24792664 TTCACAAAGATCTGCAT 24792648 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || || || ||| | | ||||| ||| || ||||| || || Sbjct 24793072 GTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 24793013 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| ||||||||||| ||| ||| || ||| Sbjct 24793012 GCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 24792953 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | ||| || || | || | || ||||| || || || Sbjct 24792952 ACGTTG-TCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGT 24792894 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 24792893 CTTCACGAAGATCTGCAT 24792876 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || ||||| || ||||| || | | ||||| ||| || ||||| || ||| Sbjct 24792616 GTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCA 24792557 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 24792556 GCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 24792497 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | |||||| || | ||| | || |||||||| || || Sbjct 24792496 ACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTC 24792437 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || || |||||| || Sbjct 24792436 TTCACGAATATTTGCATGCCT 24792416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500728674880