Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 seq5 136 4e-27 seq2 134 2e-26 seq8 125 8e-24 seq6 123 3e-23 seq4 122 1e-22 seq9 89.7 6e-13 seq3 82.4 9e-11 >seq1 Length=36915442 Score = 154 bits (170), Expect = 2e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||||| || |||||| |||| || Sbjct 21234733 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTC 21234674 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| || | ||||||||||| | ||| | | |||||||||| Sbjct 21234673 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 21234614 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 | |||| ||||| || | ||||||||| ||||| |||| ||||||||| || Sbjct 21234613 CACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTT 21234554 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||| || || || ||||| ||||| Sbjct 21234553 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 21234524 Score = 150 bits (166), Expect = 2e-31 Identities = 164/215 (76%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||||| || |||||| |||| || Sbjct 10946941 CACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTC 10947000 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| || | ||||||||||||| ||| | | |||||||||| Sbjct 10947001 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTG 10947060 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||| | ||| | | | ||||| || ||||| |||| |||||| || | Sbjct 10947061 GATCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCT 10947119 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 | |||||||| || || || ||||| ||||| ||| Sbjct 10947120 TCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 10947154 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||||| || |||||| |||| || Sbjct 21238859 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTC 21238800 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| || | |||||||||| | ||| |||| |||| |||| Sbjct 21238799 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCGTG 21238740 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||| || ||||| || | |||| ||||| || || | | ||||||||| | Sbjct 21238739 GATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGACCACGAGCGTGATGGTCCT 21238680 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || |||| || || || || || ||||| || Sbjct 21238679 CCCGTTCAGGGTCTTCACGAATATCTGCATCTT 21238647 >seq5 Length=24206129 Score = 136 bits (150), Expect = 4e-27 Identities = 150/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || |||||||||||||||||||| Sbjct 3088007 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 3087948 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | | ||||||||| |||||| ||| | ||| Sbjct 3087947 GATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 3087889 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || ||||| |||| ||||||||| || |||||||| || || | Sbjct 3087888 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 3087829 Query 46581 CAAAGATTTGCATTTTG 46597 | ||||| ||||| ||| Sbjct 3087828 CGAAGATCTGCATCTTG 3087812 Score = 120 bits (132), Expect = 3e-22 Identities = 159/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | | |||| ||||| || |||||| ||||| ||||| | | || ||||| | Sbjct 7376451 ACGGAGCGCCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAACCTGCTAAGGTGCGGCC 7376510 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| || || |||| |||||||| || | || | || |||||| Sbjct 7376511 ATCCTCGAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGATCCGGGGGAATGCCCTCCTT 7376570 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| | ||| ||| | | | ||||| ||| || || |||| || | Sbjct 7376571 GTCCTGAATCTT-TGCTTTCACGTTGTCAATTGTGTCCGACGACTCAACCTCCAAGGTAA 7376629 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||||||||| |||| || || ||||||||||||||| Sbjct 7376630 TGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCATT 7376667 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || || | ||| |||||| |||||||||||||| | || ||||| |||| | Sbjct 7376685 CACTAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTT 7376744 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||| |||||||||||| || | |||||||||||| || || | || |||||||||| Sbjct 7376745 GAGCTACTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGCGGGGATGCCCTCCTTGTCCTG 7376804 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | | | | || || || || || || | ||| ||||| || Sbjct 7376805 AATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCTT 7376864 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || ||||| || ||||| Sbjct 7376865 TCCGGTTAGGGTCTTGACAAAAATCTGCAT 7376894 Score = 113 bits (124), Expect = 5e-20 Identities = 143/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || || | | || || |||||||||||||| || Sbjct 19881028 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAA 19880969 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||||| ||||||| ||| | ||| Sbjct 19880968 AATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 19880910 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | ||| ||||| ||||| || || || || | Sbjct 19880909 TGTCGATCGTGTCTGATGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCA 19880850 Query 46581 CAAAGATTTGCATT 46594 ||||||| |||||| Sbjct 19880849 CAAAGATCTGCATT 19880836 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||| | || |||||| | || |||||||||||||| ||||| Sbjct 19880571 TCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAG 19880512 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | | |||||||||| |||||| ||| | | Sbjct 19880511 ATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 19880452 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || || || || || || | || ||||| ||||| || || || || ||| Sbjct 19880451 TCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACA 19880392 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 19880391 AAGATCTGCAT 19880381 Score = 102 bits (112), Expect = 9e-17 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | ||| |||||| || || |||||||||| || || || | || || Sbjct 19881502 CACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCTTC 19881443 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| |||| |||||||||||| | || | | ||||||||| Sbjct 19881442 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTG 19881383 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 |||||| ||| | | | | || || |||| || || |||| || ||||| Sbjct 19881382 GATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTC---TCAACCTCCAGAGTAATGGT 19881326 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || ||||| ||||| Sbjct 19881325 CTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 19881293 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || || | | || |||||||||||||| || || Sbjct 19880800 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAA 19880741 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | | |||||||||| |||||| | | | | ||| Sbjct 19880740 GATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTT-TGCCTTAACGT 19880682 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || || || || || || | ||||| || ||||| |||| || || | Sbjct 19880681 TGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGA 19880622 Query 46581 CAAAGATTTGCAT 46593 ||||||||||||| Sbjct 19880621 CAAAGATTTGCAT 19880609 >seq2 Length=31686972 Score = 134 bits (148), Expect = 2e-26 Identities = 164/220 (75%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | |||||| || | ||| |||||| ||||| |||||||| | || ||||| | Sbjct 3056246 ACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCC 3056305 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||||||||| || | ||||||||||| | || | || |||||| Sbjct 3056306 ATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTT 3056365 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCG 46553 |||| |||||| ||||| ||| | | | ||||| |||| || || |||| | Sbjct 3056366 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAGCTC---TCAACCTCCAGGG 3056421 Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| ||||| || || || || |||||||| ||||| Sbjct 3056422 TGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3056461 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || || | | || || ||||||||||| ||||| Sbjct 3056825 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 3056884 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||||| |||||| ||||| ||| Sbjct 3056885 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 3056943 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || ||||| || | ||||| || ||||| ||||| || || | Sbjct 3056944 TGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAGAGTCTTGA 3057003 Query 46581 CAAAGATTTGCAT 46593 ||||||| ||||| Sbjct 3057004 CAAAGATCTGCAT 3057016 Score = 105 bits (116), Expect = 8e-18 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||||| || ||||| | || || Sbjct 3056024 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCCTC 3056083 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| ||||| |||| ||||||||||| | || | | |||||||||| Sbjct 3056084 CAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTG 3056143 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 |||||| ||| | | | | ||||| |||| || || |||| |||||||| Sbjct 3056144 GATCTTGGCCTTCACATTATCAATGGTGTCAGAGCTC---TCAACCTCCAAAGTGATGGT 3056200 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| || || || ||||| ||||| Sbjct 3056201 CTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 3056233 >seq8 Length=22678724 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| | || ||||| | || ||||||||||||||||| || Sbjct 3995728 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCAAA 3995787 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||| ||| ||||||| ||| | | Sbjct 3995788 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGCCTTCACATT 3995847 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || ||||| || | ||||||| ||||| ||||| ||||| || Sbjct 3995848 GTCGATGGTGTCGGATGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTTTTCAC 3995907 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 3995908 AAAGATCTGCAT 3995919 Score = 102 bits (112), Expect = 9e-17 Identities = 142/200 (71%), Gaps = 8/200 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || || || |||||||| | || |||| | || ||||||||||| |||||||| Sbjct 3985246 CTCTTTCTGAATTTTGTAGTCAGCAAGGTTGCGTCCTTCCTCGAGCTGCTTACCGGCGAA 3985305 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT--------CTTC 46513 || | |||||||||||| | || | || |||||||||| |||||| || | Sbjct 3985306 GATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTTACCTTCACTGC 3985365 Query 46514 TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGC 46573 || | | | | |||||| || ||||| || | ||||||| ||||| ||||| Sbjct 3985366 TTCACATTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGATGGACTTGCCGGTCAGA 3985425 Query 46574 GTTTTAACAAAGATTTGCAT 46593 || || |||||||| ||||| Sbjct 3985426 GTCTTCACAAAGATCTGCAT 3985445 Score = 82.4 bits (90), Expect = 9e-11 Identities = 143/201 (71%), Gaps = 14/201 (7%) Strand=Plus/Plus Query 46409 TGGATATTGTAGTCGGATAGAGTGC-GCT--CGTCGTCGAGCTGCTTGC---CGGCGAAT 46462 ||||| | |||||||| || |||| || |||||||||||||||||| ||||| | Sbjct 3999377 TGGATGTCGTAGTCGGCGAGGGTGCTGCCGCCGTCGTCGAGCTGCTTGCTGCCGGCGGAG 3999436 Query 46463 A--TCAA----GCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 | || | | |||||||||||| | | || |||||||| ||||||| ||| Sbjct 3999437 ACGTCGACGAGGTGCTGCTGGTCGGAGCGGATGCCTACCTTGTCCTGGATCTTCGCCTTC 3999496 Query 46517 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575 | ||||| | | ||||||| | | ||| || | |||||||| |||| ||||| || Sbjct 3999497 A-CGTCGTCGATCGTGTCGGATGGTCTCACCTCGAGGGTGATGGTGATGCCGGTCAGAGT 3999555 Query 46576 TTTAACAAAGATTTGCATTTT 46596 || || | ||| |||||||| Sbjct 3999556 CTTCACGATGATCTGCATTTT 3999576 >seq6 Length=25711811 Score = 123 bits (136), Expect = 3e-23 Identities = 151/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || || ||||||||||| ||||| Sbjct 23416344 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 23416285 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||||| |||||| ||||| | Sbjct 23416284 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 23416225 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | |||||||| ||||| || || || || || Sbjct 23416224 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 23416165 Query 46582 AAAGATTTGCATTTTGCACAAACAA 46606 |||||| |||| | |||||| |||| Sbjct 23416164 AAAGATCTGCA-TCTGCACACACAA 23416141 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | | ||||| | || || ||||||||||||||||| Sbjct 23416732 CTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 23416673 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||| | ||| Sbjct 23416672 GATGAGACGCTGCTGGTCCGGGGGGATNCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 23416614 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | ||||||||| ||||| ||||| || || | Sbjct 23416613 TGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTCTTGA 23416554 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 23416553 CGAAGATCTGCAT 23416541 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | ||| |||||| ||||| ||||| || | || ||||| | || || Sbjct 23416978 CACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTC 23416919 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| || || || |||| ||||||||||| | || | || |||||||||| Sbjct 23416918 AAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 23416859 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||| | ||| | | | |||||| ||| || || || | || ||||| | Sbjct 23416858 GATCTTCGCCTTCA-CGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCT 23416800 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||| || || || ||||| ||||| Sbjct 23416799 TGCCAGTCAGGGTCTTCACGAAGATCTGCAT 23416769 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| ||||| || |||||| || || ||||| || | || || || | || || Sbjct 22963791 CACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGTGTACGTCCATCCTC 22963850 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||| || || || | |||||||||||| | || | | |||||||||| Sbjct 22963851 GAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTG 22963910 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | | | | | |||| || || || || | |||||||| || Sbjct 22963911 AATCTTCGCCTTCACATTGTCGATCTTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTT 22963970 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || || |||||||| ||||| Sbjct 22963971 TCCTGTCAAGGTCTTCACAAAGATCTGCAT 22964000 >seq4 Length=27574323 Score = 122 bits (134), Expect = 1e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || || |||| || |||||| ||||| || ||||||| || ||||| | Sbjct 24793090 CGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCA 24793031 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | |||||||||||| | || | || |||||| Sbjct 24793030 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTA 24792971 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| ||| | ||| | | | ||||| || || || |||| ||||| Sbjct 24792970 TCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGAT 24792912 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || || || ||||| ||||| Sbjct 24792911 GGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 24792876 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || || |||| || |||||| ||||| ||||| || | || ||||| | Sbjct 24792862 CGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCA 24792803 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||| ||||| || | |||||||||||| | || | | ||||||| Sbjct 24792802 TCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTG 24792743 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| |||||| ||| | | | | |||||| || || || |||| ||||| Sbjct 24792742 TCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATC 24792683 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || || || |||||||| ||||| Sbjct 24792682 GTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 24792648 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || ||||| || |||||| ||||| || || || | ||||| ||| | || || Sbjct 24792400 ACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCA 24792341 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| ||||| || | ||| |||||||| | || | || |||||||||| Sbjct 24792340 AGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGA 24792281 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | ||| ||| || || || |||| |||||||| ||| Sbjct 24792280 ATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTG 24792221 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || ||||| || || ||||| Sbjct 24792220 CCAGTGAGGGTCTTAACGAATATCTGCAT 24792192 Score = 105 bits (116), Expect = 8e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| |||||||| | || ||||| | || ||||||||||| || || || Sbjct 24792610 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAG 24792551 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | | |||||||||| |||||| ||| | | Sbjct 24792550 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 24792491 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||| || || || |||| || ||||| ||||| || || || || || Sbjct 24792490 TCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACG 24792431 Query 46583 AAGATTTGCAT 46593 || |||||||| Sbjct 24792430 AATATTTGCAT 24792420 >seq9 Length=19219615 Score = 89.7 bits (98), Expect = 6e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||||| || ||||| |||| || Sbjct 15027722 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCATC 15027663 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| |||||||| || | |||||||||||| | ||| Sbjct 15027662 CAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 15027621 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||||| || |||||| | || || ||||||||||||||||| Sbjct 11939286 CTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 11939227 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 46501 |||||| ||||| || || | || | | ||||||||| Sbjct 11939226 TATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTCC 11939187 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || || ||||||||||||||||| Sbjct 18897001 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 18896942 Query 46462 TATCAAGCGCTGCTGGTC 46479 || | |||||||||||| Sbjct 18896941 GATGAGGCGCTGCTGGTC 18896924 >seq3 Length=33311619 Score = 82.4 bits (90), Expect = 9e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || | || || | |||||| || | || |||||| ||||| |||||||||| Sbjct 7808383 GCCGCCGCGTAGGCGAAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 7808324 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 || ||||| | || || |||||||| |||||||| || | |||||||||||| | ||| Sbjct 7808323 CAGCGTGCGGCCATCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 7808264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238315214240