Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq5 158 3e-33 seq2 143 6e-29 seq8 138 3e-27 seq6 138 3e-27 seq4 138 3e-27 seq1 129 1e-24 seq9 87.8 4e-12 >seq5 Length=24206129 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||||||||| |||||||| || || || ||||| || ||||| || || ||||| || Sbjct 19880818 AACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTC 19880759 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || ||||| || || || ||||| || ||||| || || ||||| || Sbjct 19880758 GAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTG 19880699 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || ||| ||| ||||| ||||| || || ||| || || |||||||| | ||||| Sbjct 19880698 GATCTTTGCCTTAACGTTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTT 19880639 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | |||||| Sbjct 19880638 GCCAGTCAAGGTCTTGACAAAGATTTGCAT 19880609 Score = 140 bits (154), Expect = 7e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 || || | || |||||||||||| |||||||| || || || ||||| || || || || Sbjct 19881057 CTTAGGCGCAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTC 19880998 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 || ||||| || |||||||| || || || ||||| || || |||||||| |||||||| Sbjct 19880997 CTGCCATCCTCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGGTCTGGGGGAATGCCC 19880938 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099 || ||||| || || || ||| ||||| || || ||||| || || || ||||| Sbjct 19880937 TCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCTGATGACTCAACCTCAAGC 19880878 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| ||||| || || | || || || || | |||||| Sbjct 19880877 GTAATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCATT 19880836 Score = 140 bits (154), Expect = 7e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || ||||| ||||| || ||||| || | ||||| || ||||| Sbjct 19881268 GTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTG 19881209 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| |||||||| |||| || ||||| || || ||||| || || || || || || Sbjct 19881208 CTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTT 19881149 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||||| || |||||||| || || || || || ||||||| ||||| || || Sbjct 19881148 CGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATAGTCTTGCCAGT 19881089 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 | ||| || ||||| | |||||| Sbjct 19881088 GAGAGTCTTGACGAAAATCTGCATT 19881064 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| ||||| || || | ||||| ||| Sbjct 3088024 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCG 3087965 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || ||||| ||||| || Sbjct 3087964 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGG 3087905 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || ||||||||||| ||||| || || || | ||||| Sbjct 3087904 ATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTC 3087845 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 3087844 CCCGTCAGGGTCTTCACGAAGATCTGCAT 3087816 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| || || || || ||||| || ||||| || | |||||||||| Sbjct 19880589 ACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCG 19880530 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || || || ||||| || Sbjct 19880529 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGG 19880470 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || |||||||| ||||| || || |||||||| | ||||| Sbjct 19880469 ATCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTG 19880410 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || || || | ||||| Sbjct 19880409 CCAGTGAGAGTCTTCACAAAGATCTGCAT 19880381 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 ||||| | |||||||| || || || |||||| | || | || | ||||| |||||| Sbjct 7376461 AGGTGCAAGGTGGACTCCTTCTGGATGTTGTAACCTGCTAAGGTGCGGCCATCCTCGAGC 7376520 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || || ||||| ||||| || || || || |||||||| || ||||| ||||| Sbjct 7376521 TGCTTGCCAGCAAAGATCAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGAATC 7376580 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||| || ||||| ||||| |||||||| || || || | ||||| || || || Sbjct 7376581 TTTGCTTTCACGTTGTCAATTGTGTCCGACGACTCAACCTCCAAGGTAATGGTTTTGCCG 7376640 Query 195115 GTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| || || || || | ||||||| Sbjct 7376641 GTCAATGTCTTGACAAAGATTTGCATT 7376667 Score = 123 bits (136), Expect = 6e-23 Identities = 156/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||||||||||||||| ||||| ||||| || || | || | ||||| || Sbjct 7376914 ACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCCGCCAAGGTCCGACCATCCTCA 7376973 Query 194992 AGCTGCTTACCTGCGAAGAT-AAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || |||||||| ||| || || ||||| | || || || || || || || Sbjct 7376974 AGCTGCTTGCCAGCGAAGATAAAGACGATGCTGGTCAAGGGGGATACCCTCCTTATCCTG 7377033 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCA-CTTCAAGGGTAACCGTCT 195109 || ||| ||| ||||| ||||| ||||| || || | || ||| | | |||| Sbjct 7377034 GATCTTTGCCTTCACGTTGTCAATCGTGTCTGAGGACTCAACCTCCAAAGTGATGGGTCT 7377093 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| |||||| || || || || | |||||| Sbjct 7377094 TTCTTGTCAAGGTCTTCACAAAGATCTGCATT 7377125 Score = 113 bits (124), Expect = 1e-19 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||||||||| ||||| |||||||| || || || | || || || Sbjct 7377144 ACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGTCCGTCCTCA 7377203 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || ||||| || || || |||| || ||||| || || ||||| ||| Sbjct 7377204 AGTTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTTAGGTGGAATACCCTCCTTGTCCTGA 7377263 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083 || || |||||| || ||||| ||||| || Sbjct 7377264 ATCTTGGCCTTGACATTGTCAATCGTGTCAGA 7377295 >seq2 Length=31686972 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || || || || | ||||| ||| Sbjct 3056253 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCG 3056312 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || |||||||| || ||||| || ||||| || Sbjct 3056313 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 3056372 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| || || || || ||||| | ||||| Sbjct 3056373 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTCTTG 3056432 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | || || || || | ||||| Sbjct 3056433 CCTGTGAGGGTCTTGACAAAGATCTGCAT 3056461 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| ||||| || || | ||||| || Sbjct 3056025 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCCTCC 3056084 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || |||||||| ||||| || || ||||| || Sbjct 3056085 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGG 3056144 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || ||||||||||| || || || || || | || | ||||| Sbjct 3056145 ATCTTGGCCTTCACATTATCAATGGTGTCAGAGCTCTCAACCTCCAAAGTGATGGTCTTC 3056204 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | ||||| Sbjct 3056205 CCAGTCAAGGTCTTCACGAAGATCTGCAT 3056233 >seq8 Length=22678724 Score = 138 bits (152), Expect = 3e-27 Identities = 160/217 (74%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||||||||| ||||| ||||| || ||||| | | || || ||| Sbjct 3985229 ACAAGATGGAGGGTGGACTCTTTCTGAATTTTGTAGTCAGCAAGGTTGCGTCCTTCCTCG 3985288 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || ||||| ||||||||||| || ||||| || Sbjct 3985289 AGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 3985348 Query 195052 ATTTTT--------TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAA 195103 || ||| ||||| || || || |||||||| || ||||| || ||||| | Sbjct 3985349 ATCTTTACCTTCACTGCTTCACATTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGA 3985408 Query 195104 CCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||| || |||| ||| || || || | ||||| Sbjct 3985409 TGGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 3985445 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || ||||| || ||||| ||||| || ||||| || | || || ||| Sbjct 3995711 ACAAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCG 3995770 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| || |||||||| || || || || Sbjct 3995771 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGG 3995830 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || |||||||| || ||||| |||||||| | | ||| Sbjct 3995831 ATCTTCGCCTTCACATTGTCGATGGTGTCGGATGACTCCACCTCAAGGGTGATGGACTTG 3995890 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| ||||| || || | ||||| Sbjct 3995891 CCGGTCAGGGTTTTCACAAAGATCTGCAT 3995919 >seq6 Length=25711811 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| | |||||||| || ||||| |||||||| || || || | ||||| ||| Sbjct 22963792 ACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGTGTACGTCCATCCTCG 22963851 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| ||||| ||||| || || || ||||| || ||||| || || ||||| ||| Sbjct 22963852 AGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGA 22963911 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || ||||||| || || ||||| || | |||||| Sbjct 22963912 ATCTTCGCCTTCACATTGTCGATCTTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTT 22963971 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||||| || || || || | ||||| Sbjct 22963972 CCTGTCAAGGTCTTCACAAAGATCTGCAT 22964000 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || |||||||| ||||| || | ||||| || Sbjct 23416977 ACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCA 23416918 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| || || || ||||| || || ||||| || ||||| || Sbjct 23416917 AGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 23416858 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| ||||| ||||| || || || |||||||||| ||||| Sbjct 23416857 ATCTTCGCCTTCACGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCTTG 23416798 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 23416797 CCAGTCAGGGTCTTCACGAAGATCTGCAT 23416769 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 |||||||| || || || ||||| ||||| || || | ||||| || |||||||| || Sbjct 23416349 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 23416290 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || ||||| || || ||||| || ||||| || || || |||| Sbjct 23416289 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 23416230 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || |||||||||||||| || || || ||||| | ||||| || || | || Sbjct 23416229 ACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 23416170 Query 195124 TTTACGAACACTTGCAT 195140 || || || | ||||| Sbjct 23416169 TTCACAAAGATCTGCAT 23416153 >seq4 Length=27574323 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| | |||||||| || || || || ||||| || ||||| | |||||| || Sbjct 24792400 ACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCA 24792341 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| ||||| ||||||||||| ||||| || ||||| ||| Sbjct 24792340 AGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGA 24792281 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || ||||| || || || || || || | ||| | ||||| Sbjct 24792280 ATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTG 24792221 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 24792220 CCAGTGAGGGTCTTAACGAATATCTGCAT 24792192 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || |||||||| || || || || || |||||||| || | ||||| ||| Sbjct 24793084 ACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCG 24793025 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||||||||| ||||| || || || || Sbjct 24793024 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 24792965 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || |||||||| || || || || || || | ||||| Sbjct 24792964 ATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTG 24792905 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 24792904 CCAGTGAGGGTCTTCACGAAGATCTGCAT 24792876 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| || ||||| || ||||| || ||||| || | ||||| ||| Sbjct 24792628 ACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCG 24792569 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || |||||||| || || || || ||||| || Sbjct 24792568 AGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGG 24792509 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || ||||| || || || || ||||||| ||||| Sbjct 24792508 ATCTTGGCCTTCACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTG 24792449 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 24792448 CCGGTGAGGGTCTTCACGAATATTTGCAT 24792420 >seq1 Length=36915442 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| ||||| || || | ||| || || Sbjct 10946942 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCC 10947001 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || || || ||||| || Sbjct 10947002 AGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGG 10947061 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || ||||||||||| ||||| || || || | |||||| Sbjct 10947062 ATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTC 10947121 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 10947122 CCCGTCAGGGTCTTCACGAAGATCTGCAT 10947150 Score = 116 bits (128), Expect = 8e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| ||||| || || | ||| || || Sbjct 21234732 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTCC 21234673 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || || || ||||| || Sbjct 21234672 AGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGC 21234613 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 | || ||||||||||| || ||||| || ||||| || || || | ||||| Sbjct 21234612 ACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTTC 21234553 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 21234552 CCCGTCAGGGTCTTCACGAAGATCTGCAT 21234524 Score = 89.7 bits (98), Expect = 1e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| ||||| || || | ||| || || Sbjct 21238858 ACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTCC 21238799 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || |||| || || | ||| || |||| || Sbjct 21238798 AGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCGTGG 21238739 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || | |||||||||||| | | ||| | || || || | || || | ||| | Sbjct 21238738 ATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGACCACGAGCGTGATGGTCCTC 21238679 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||| || || ||||| | ||||| Sbjct 21238678 CCGTTCAGGGTCTTCACGAATATCTGCAT 21238650 >seq9 Length=19219615 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || ||||| ||||| ||||| || || | ||||| ||| Sbjct 13562095 ACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCG 13562036 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 |||||||| || |||||||| || || || ||||| | || || ||| Sbjct 13562035 AGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCCAGCGGGATACCT 13561988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481429417204