Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6 230 3e-54 seq5 141 1e-27 seq1 141 1e-27 seq8 120 4e-21 seq11 109 7e-18 seq9 105 8e-17 seq7 98.7 1e-14 seq3 93.3 5e-13 >seq6 Length=25711811 Score = 230 bits (254), Expect = 3e-54 Identities = 248/322 (77%), Gaps = 5/322 (2%) Strand=Plus/Minus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| ||| ||||| |||||| |||||| |||||||||||||||| || ||||| Sbjct 1225620 CGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGGGAGAT 1225561 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGAGCGACG 868808 | ||||||||| ||||||||||| || | ||||| ||| | ||| ||||||| | Sbjct 1225560 GAGCTCCATCCAGTCGAACGGGTTGG-CGACGTTGTACATCTTCTTGCACCCGAGCGCCA 1225502 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 |||||| ||||||||||| |||||||||||||||| |||||| || ||||||| |||| Sbjct 1225501 TGAGCAGCCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGCCGTTCATCCCGA 1225442 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 |||||| || || |||| |||| || ||||| ||||||| || ||||| ||| ||| Sbjct 1225441 CGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCACGGCGTCGGCGA 1225382 Query 868929 TGATCTGCCTGGGCACGTCGGCCG-AGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 ||||| ||||| | ||| || | ||||| | ||| | |||||| |||||| Sbjct 1225381 CGATCT-CCTGGACGCGTGACTCGTCGAGCTTGCCGCGGAGGAGGTCGTAGAGGAGGCAG 1225323 Query 868988 GCAAAGTCGCAGTGCA-ACCCT 869008 || ||||||||||| | ||||| Sbjct 1225322 GCGAAGTCGCAGTGGAGACCCT 1225301 Score = 223 bits (246), Expect = 4e-52 Identities = 248/323 (77%), Gaps = 6/323 (2%) Strand=Plus/Plus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 |||| |||||| ||| ||||| |||||| |||||| |||||||||||||||| || Sbjct 7420485 GACGGACGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAG 7420544 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGA 868802 ||||| | ||||||||| ||| ||||| |||| | ||||| ||| | ||| |||| Sbjct 7420545 GGAGATGAGCTCCATCCAGTCGAAGGGGTT-GGCGACGTTGTACATCTTCTTGCAGCCGA 7420603 Query 868803 GCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCA 868862 | | | ||| |||||||||||||| || ||||||||||||| ||||||| || |||||| Sbjct 7420604 GTGCCATGAGGAGGCGGTCGGCGACGAATTCGATGTACTGGCTCATGAGGTCGCCGTTCA 7420663 Query 868863 TGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCT 868922 |||||| |||||| || || |||| |||| || ||||| ||||||| |||||||| | Sbjct 7420664 TGCCGACGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCGACGGCGT 7420723 Query 868923 CGACGATGATCTGCCTGGGCACGTCGGC-CG-AGGGCTTGTTGACGAGCATCGTGTAGAG 868980 || ||| ||||| | || | || || | || | ||||| | ||| | |||||| Sbjct 7420724 CGGCGACGATCT-CGCGGACGCG-CGCCTCGTCGAGCTTGCCGCGGAGGAGGTCGTAGAG 7420781 Query 868981 CAGGCAGGCAAAGTCGCAGTGCA 869003 |||||||| ||||||||||||| Sbjct 7420782 GAGGCAGGCGAAGTCGCAGTGCA 7420804 Score = 219 bits (242), Expect = 5e-51 Identities = 215/275 (78%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||||||||| ||||| | |||| || || || Sbjct 7421086 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGAGCCTCGGCGACCTGC 7421145 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || |||||||| | ||| ||||||||| ||||||||||||| ||||||||| Sbjct 7421146 ACGTCGGACATGAACCTGGAGGCGAGGTTCTCGAGCACGATGCCGTCGGAGGCGGCGAAG 7421205 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCG--CTGAGCGAC-ACCCAGTGG 869809 || || || ||||| ||| ||||||||||||||| | | | ||| | |||||||| Sbjct 7421206 AAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGTCGGGGGACAGCGCGGCGTCCCAGTGG 7421265 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | ||||||| ||||||||||||||| || ||||||| ||| ||| | ||||| ||| Sbjct 7421266 CGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCTTCTTG 7421325 Query 869870 TACATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 || | |||||| | ||| |||| | ||| ||||| Sbjct 7421326 TAGAACTCCCAGATCTGCGGGTACCTGATCGGGAA 7421360 Score = 194 bits (214), Expect = 2e-43 Identities = 214/284 (75%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | |||||| |||| |||||| |||||||| || |||||| Sbjct 7420807 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGCCCCCGCTTC 7420866 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| |||||||||||||| ||||||||| ||||| ||||||||| ||| ||| Sbjct 7420867 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAG 7420926 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| ||| |||||||| ||| ||| || || || |||||| ||| |||||| Sbjct 7420927 GCGACGAGGCGCTCGGCGAAGCGCTCG----CCACC--GTCGATCCAGCGCATGGCCCAG 7420980 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 |||||||| | ||| | ||| || |||||||||||||| || || ||||||| ||| Sbjct 7420981 TCGGCCTTGCGGCGCACGGCCGGGACGGTGTCGATGGCGCGGAACAGCCGGTCCTTCTCG 7421040 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||| || ||||| |||| ||| ||||| || |||| Sbjct 7421041 GCGCCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTC 7421084 Score = 93.3 bits (102), Expect = 5e-13 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| |||||||| ||| | |||||| |||| |||||| |||||||| |||||||| Sbjct 1225305 ACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGTCCGCGCTT 1225246 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAA 869274 ||||||||| |||||||||||||| |||||||| Sbjct 1225245 CTTGAGCCAGAAGATGGCGCAGAATGAACCCGAGAA 1225210 >seq5 Length=24206129 Score = 141 bits (156), Expect = 1e-27 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 23071605 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 23071546 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||||||||| | ||| |||| | Sbjct 23071545 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 23071486 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 23071485 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 23071426 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 23071425 GGACCTGCTTGAGCACCTTGAAGATG 23071400 >seq1 Length=36915442 Score = 141 bits (156), Expect = 1e-27 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 2423358 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 2423299 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||||||||| | ||| |||| | Sbjct 2423298 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 2423239 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2423238 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2423179 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2423178 GGACCTGCTTGAGCACCTTGAAGATG 2423153 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 2372281 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGTGAGGTGA 2372340 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || |||| || | ||| |||| ||| |||| | Sbjct 2372341 TGGTGGGCTTCTTGTTGTAGCGCGCGAGCTTGGCGGACTCGCCAGCGAGCTTCTCGAAGA 2372400 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2372401 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2372460 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2372461 GGACCTGCTTGAGCACCTTGAAGATG 2372486 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 2390144 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGA 2390203 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2390204 TCGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGA 2390263 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2390264 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2390323 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2390324 GGACCTGCTTGAGCACCTTGAAGATG 2390349 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| ||||||||||||||||| || | | || Sbjct 2402262 GCTTGGCAAGCTCGCCGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCCCGGGAGGTGA 2402321 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2402322 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 2402381 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2402382 TGTCGTTGATGAAGGAGTTCATGATAGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2402441 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2402442 GGACCTGCTTGAGCACCTTGAAGATG 2402467 Score = 125 bits (138), Expect = 9e-23 Identities = 156/210 (74%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCG---TGC 1254399 || |||| || |||||| | | || ||||| |||| ||||| ||||||||| | || Sbjct 14585459 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTAGATCTCGCGGGAGGTGG 14585518 Query 1254400 CGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCG 1254458 |||| | || |||||| || | || || ||| ||||||| ||| ||| ||| Sbjct 14585519 CGATGGGCTT---CTTGTTGTAGCGGGCGAGGCGGGCGGCCTCC-TGCGCGAGCTTCTCG 14585574 Query 1254459 ATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCG 1254518 | |||||||||| || |||||||||| |||||| | |||| |||||| || | ||| Sbjct 14585575 AAGATGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATNCCGATGTCC 14585634 Query 1254519 GGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||| || |||||| ||||| Sbjct 14585635 GGGTGCACCTGCTTCAGGACCTTGAAGATG 14585664 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || ||||| | | || ||||| ||||||||||||||||| || | | || Sbjct 2383533 GCTTGGCGAGCTCGCCTGGGAGGACGAGGCGGACGGCGGTCTGGATCTCCCGGGAGGTGA 2383592 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2383593 TCGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGA 2383652 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | ||| ||||||||| | |||||||| Sbjct 2383653 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCTTTGGAGGAGATGCCGATGTCGGGGT 2383712 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2383713 GGACCTGCTTGAGCACCTTGAAGATG 2383738 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || |||||||| | ||||||||||||||| | | || Sbjct 30411045 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGA 30411104 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || | || |||||| ||||||| | ||| |||| | Sbjct 30411105 TGGTCGGCTTCTTGTTGTAGCGGGCGAGACGGGCGGCCTCCTGGGCGAGCTTCTCGAAGA 30411164 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||||| ||||||||||||| |||||| | |||| ||||| || | ||||| | Sbjct 30411165 TATCGTTGATGAACGAGTTCATGATCGACATGGCCTTGGACGAGATCCCGATATCGGGAT 30411224 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| |||||| | ||| Sbjct 30411225 GCACCTGCTTGAGGACCTTGAAAATG 30411250 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 2251809 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGA 2251750 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2251749 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 2251690 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2251689 TGTCATTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2251630 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2251629 GAACCTGCTTGAGCACCTTGAAGATG 2251604 Score = 87.8 bits (96), Expect = 2e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 292398 ATCGAGCCCGACCGCGAGGTGCGCAAGGCCATGAACGACATCAACGCGGCAGCGCGCCAG 292457 |||| |||||| | |||||| ||||||||||||||||||||||| ||||| | | Sbjct 18672712 ATCGTCCCCGACGAGGTGGTGCGGCGCGCCATGAACGACATCAACGCGGCGGCGCGGCTG 18672653 Query 292458 CGCATGGCCGCTCTGGACCGCGCCGAGGCCGACAAG 292493 ||| |||| || ||| |||||||||||||||||| Sbjct 18672652 CGCGTGGCGGCGGCGGAGCGCGCCGAGGCCGACAAG 18672617 Score = 86.0 bits (94), Expect = 8e-11 Identities = 94/123 (76%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 1349427 GTCGGCGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGA 1349486 |||||| ||| | || || | ||||| |||| |||| || ||||||||||||||||| Sbjct 23549426 GTCGGCCGCC--GCGC-TCACGTACCTCCACGCCATCGAGCCACCCATCGTGCACCGCGA 23549370 Query 1349487 CCTCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGG 1349546 | |||||| | ||| | || ||||| ||| | |||||||||| ||||||||||| Sbjct 23549369 CGTCAAGACCACCAATATCCTCCTCGACGCCGACTTCCACGTCAAGGTCGCCGACTTTGG 23549310 Query 1349547 CCT 1349549 ||| Sbjct 23549309 CCT 23549307 >seq8 Length=22678724 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| | | | || Sbjct 18957452 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGA 18957393 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| | || || | |||||||| | ||| |||| | Sbjct 18957392 TGGTGGGCTTCTTGTTGTACCTGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGA 18957333 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| ||||| | |||| |||||| || | ||| |||| Sbjct 18957332 TGTCGTTGATGAACGAGTTCATGATTGACATGGCCTTGGAGGAGATCCCGATGTCCGGGT 18957273 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||||||| ||||| Sbjct 18957272 GCACCTGCTTGAGCACCTTGAAGATG 18957247 >seq11 Length=23014695 Score = 109 bits (120), Expect = 7e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| ||||||||| |||||||| |||| || ||| ||| || |||| || || Sbjct 12616256 GCCGCGAACTACCTCAACATCAAGGGGTTGCTGGACCTTACTTGCCAGACTGTTGCTGAC 12616315 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||| | || |||||||||||||||||||| ||||||||| ||| Sbjct 12616316 ATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACCTTCAACATCAAGAACG 12616370 >seq9 Length=19219615 Score = 105 bits (116), Expect = 8e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||||||| |||||||| ||||| ||||| ||| || | ||||| || Sbjct 17496100 GCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGAC 17496041 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||| ||| | || |||||||||||||||||||| ||||||||| Sbjct 17496040 ATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAG 17495990 >seq7 Length=24128185 Score = 98.7 bits (108), Expect = 1e-14 Identities = 124/168 (74%), Gaps = 7/168 (4%) Strand=Plus/Plus Query 1592131 GTGGGACAAGGAGTTTTGCGACG---TCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGC 1592187 ||||||| | || || ||||| | || ||| | ||||||| || | ||| || Sbjct 20656882 GTGGGACGAAGACTTCGTCGACGAGCTGGACCAGGACGCCCTCTTCGATGTCATCGCGGC 20656941 Query 1592188 CGCCAACTACCTCGACATCAA--GCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||||||||||||| ||| | ||||| ||||| || |||||| || ||| || Sbjct 20656942 CGCCAACTACCTCGATATCGATGGCCTC--CTCGACCTCACCTGCAAGAGGGTCGCCGAC 20656999 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 | ||||||||||||| | |||||||||||||||||| || |||||| Sbjct 20657000 ACGATCAAGGGCAAGACCCCCGAGGAGATCCGCAAGGAGTTCAACATC 20657047 >seq3 Length=33311619 Score = 93.3 bits (102), Expect = 5e-13 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 1347607 GTCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAG 1347666 ||| ||||||||||| |||||||| |||||| |||||||||||||| | |||||||| Sbjct 2311321 GTCATCCACCGCGACGTCAAGTCGAGCAACGTCCTCCTCGACGCCAACATGGACGCCAAG 2311262 Query 1347667 ATCTCAGACTTTGGCCTCACGC-AGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTGGG 1347725 ||| | ||||| |||||| | | || | ||||||||||| | | ||| | |||| | Sbjct 2311261 ATCGCCGACTTCGGCCTCGCCCGCGTCAT-GGCGCGCGCCCACGAGACCGTCTCCGTCGT 2311203 Query 1347726 CACCG 1347730 | ||| Sbjct 2311202 CGCCG 2311198 Score = 93.3 bits (102), Expect = 5e-13 Identities = 99/130 (76%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 1349432 CGGCCAAGGGCGTCGCCTACCTGCAC---GGTCTCGACCCGCCCATCGTGCACCGCGACC 1349488 ||||||||| | |||| ||||||||| | | ||||||||||| ||||||||| Sbjct 6128600 CGGCCAAGGCCATCGCGTACCTGCACTCGGAGGTGCACCCGCCCATCTACCACCGCGACA 6128659 Query 1349489 TCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCC 1349548 ||||| | ||||| | ||| ||||||| | |||||| |||||| |||||||| || | Sbjct 6128660 TCAAGTCCAGCAACATCCTGCTCGACCACGAGTACAACTCCAAGGTCGCCGACTTCGGGC 6128719 Query 1349549 TGGCGCGCAT 1349558 || |||| || Sbjct 6128720 TGTCGCGGAT 6128729 Score = 91.5 bits (100), Expect = 2e-12 Identities = 122/167 (73%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 8752574 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 8752515 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATC 1254461 | ||| |||||| || | || || ||| ||||||| ||| ||| |||| Sbjct 8752514 TGGTGGGCTTCTTGTTGTAGCGGGCGAGGCGGGCGGCCTC-CTGCGCGAGCTTCTCGAAG 8752456 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGAT 1254508 |||||||||| || |||||||||| |||||| | |||| |||||| Sbjct 8752455 ATGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGAT 8752409 Score = 86.0 bits (94), Expect = 8e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 1572461 TCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACAACGTGGTCGGCGTCGGTGTGG 1572520 ||||||| || ||| ||||| || | || || || || ||||| ||||| |||| Sbjct 24165936 TCGATGATCATCTGCGCGATCCGGTCGCCGGGCTTCACGGCGAAGTCGGTGTCGGAGTGG 24165995 Query 1572521 TTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCTGCGCCGACG 1572580 |||||||| | ||| || ||| ||| || |||||||| ||||| || || ||||| ||| Sbjct 24165996 TTGAAGAGGATGACCCCTACCGGGCCACGGTAGTCGGCGTCGATCACCCCGGCGCCCACG 24166055 Query 1572581 TCGAT 1572585 ||||| Sbjct 24166056 TCGAT 24166060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138215223804